Ll_transcript_217552

• Id Trinity: FTRINITY_DN56358_c5_g1_i7
• Name Transcript: Ll_transcript_217552
• Sequence: CTCCAATAAGTATTGAAAGCGAGAAAATGTGATATAGAGATATAGAAAGGAGTGTTGGTGTGGCTCCAAATTAACCACGAAACTATAACATAATAACAAC AATTTATATTCACTCAATTCATCATCTTCTTCTTCTTCTTCTTCATTCTGCAACACAGTGCATATACCAAAGTGAGGTAAATGATAATGGATATGACTAA ATCCACACCTTTGACGTGGTCCCACACCATCTCTCATTCTCTTCATCTTCCTGCTCCCCTCTTTACCACTCAGGCTAGGAGCTTCAGGGTTTTGTGTGCC TCTCATCAAACCCCGAAGGGGAATCAAATGATCATATCCATAACTGGAGCAACAGGTTTTATAGGAAGAAGGTTGGTGCAAAGGCTTCATGCAGGTTATC CATTAGTTCAGCCTATAACTCCCTAGGCCCTTTCACTTTTTGTTTTATGATATGTGCCCTTTTTTTAGTACATTCATATATGGATCCTAAAATCATTGTG TTCTCATGTCCCCAGCCAATCAAATTTGACCAAATAATAATAAAAAATGTTATTTTATGTTTTTGTAAATTTTCTTTTTAATTATGTCACACTCTTCCGT CGGATTGAGACAGGGTATGAGATAGGTGATCTCTGTCCATTGATATATAGCCTTTTTCTAGCGCTCTCATGTGGATGAGGATCTGTTGTCCCCAATTATG TCTCCAACTATGTACCAAACCAATCACAATGCAGAAAAAATAAATAAAATGATAAATATTTAATTTTGTAACTGATGTGACATGTTGTTATTGGCTTGGG ACAGAGTTCGGGGTTCGGGACAGCAGATCCTTGTCCCCCTCATGTATCTCTAGATTTCAACCTTATTTGTCCAATCCTGGATATCCTGTACTATCAAGGT GCATTCTGGTTGTATTGTCCTCTTATGTTGCAAAATAATTACAAAATATAATTTTGAAGCCTCTTGTGTCAAATAACTGATAAATGGTTGTGTCCTTATG TCATTGCCCTGCATAGTGAATCTGTAGAATCACTGAATTTTGTTAGATCTCTTGCATTCCTCTCTGTATCATTTAAACTCTTTGCTTTTGCTGGTGTAAC ATTCTCTTCTTAACTAACAATGTTTTGCAGACAATCATAGTGTTCATGTCTTGACCCGTTCTAAATCTAAAGCACAAGAAATCTTTCCGGGTAAGAAGGT AATATATTACAGTAATAATTTGCATTAGTACTCACAGTTAGTAAAAACATATACTGACTACAACTCGTTATCAACTGCAAACTTTTTCCAAAGAACAAAA TGACATATCTACTTCACTGAATAAGGGCAAAGCACCTTAAGAATCATATTTGTCATTGTTGGTTTTAATTCATAAATAATCTGGATTCCTCTGCTAATTA TTTTTTACCTTTATCTTCTTTGTAGTAGTGGAAAAACTAATAGTTTTCTGTACAACCGGAGTCAAACTCAGATATATACTATACTTCGGATTAACTGGTT AACTCTGCCTTGGTATTTCCAGTGAAAGACTTTCCAGGAATCAAGATTGCAGGGGAGCCAGAATGGAAAGATAGCATTCAGGGCTCAACCGGGGTTGTGA ATTTGGCTGGATTGCCCATAAGTACCAGATGGTCTTCTGAGGTTATTGCCATGCTTTTATCACATCCATTATCTAAATGAATAAATGATTTAAACTTGAG GTTACATCTAGTGGTGGTTATTTAGAGATAATAGCGTAATAGTCATCTTTCTTTTAATATCTTTTTCCTTGTGTCCGTTAGAACTAATTTGAGGTTTTTC TTTGCTTGTTGTTAGTATAAGTCTTTCTTTTCTAGTATAACCTACTGAACAACATTTCTTAGAGCCTAGTACCGGACAATACATATATAACACCAAAAGC ATTACATAGATTTTAATGTTGCAGATAAAGAAGGAAATCAAGGAGAGCAGGATTAGAGTGACCTCAAAGGTAAGCATACATCTCCAACGGATAAAATAAT AAAAATATCTTTCTTTTTTCATTTGGCAAAATATATCTTTGCGTCAACTTAAGCAAGAGTTATTTACATGAACCATTTCTTATTCTTCCTCTGACCTATT CATTTCATAGCAAAGGTTGTAGAATTGATAAACAGTTCACCAGATGATACTCAACCTAAAGTTTTTGTTAGTGCAACAGCAGTTGGTTATTATGGTATGC TTTTAAGCCTAGAATGGTTCTTTATTGGTTGATCATCTTCTTGCTTGTTAATTAATGTTGTCATCGATTATTTTCTCCCTTCTTGTGTAATAATACTTAT TGTCATTGATTATTACATTCTTCTGCTAGCAAATGTAGTTATTTTTGTAGCATGTATGATTTTGCATCAAAAGTTTGCTTAACATTTTCATTTGATTTTG CTGTGTTCAGGCAGCAGTGAGACACAAGTTTTTGATGAACAAAGTCCATCGGGAAAGGATTACTTGGCCGAGGTTTGTAGAGAATGGGAATCAACAGCCC TACGAGTAAATGGTGATGCTAGAGTAGCTCTTATTCGTATTGGTGTTGTTCTTGGTAAAGATGGTGGAGCACTAGCTAAAATGGTACCCCTCTTCATGAT GTTTGCTGGTGGTCCTTTAGGCTCTGGAAAACAGTGGTTCTCTTGGATTCATTTGGATGACATTGTCAATTTAATATATGAAGCACTATTAAATCCATCT TACAAAGGAGTTATAAATGGAACGGCCCCAAATCCTGTCCGATTGTCAGAATTATGTGAGCAACTGGGATATGTCTTGGGTCGTCCCTCGTGGCTGCCGG TACCAGACTTCGCGCTCAAAGCTGTCCTTGGAGAAGGTGCTTCTGTGGTCTTAGAAGGGCAGAGAGTGCTTCCTACTCAGGCTAAGAAGTTGGGCTTCCC ATTCAAATATTCCTACGTGAAGGATGCCTTAAAAGCAATTCTTTCATGAAGCACTTTTCTTCTTTGGATTATTGCATCAGCTTTTCCCAGACACAAGTGG CATTCACTGTAGACATTTAAAGGTGGTACAGTTATGGTTAATTATGATAATGTATAAATATATGATTCTCTTCTGGCATGTGCCACTTTACTACTAGGTG ATATGCCATCACCCATTTCTTCCTTAACATTGCTAAATTGCCACTTCATTATAGAGGCAGCCATATTTGTTCACAGCAAAACTTTGCATGATTTTATGAG TTCTATTCTAATGACTATAAATATGAAGATTTTTTATATCACTTCACTATAGATGCTAA
• Tissue: flowers
• Gene name: LI_gene_59496;
• Additional information: details;

Expression of Ll_transcript_217552

FPKM

• FPAB: 11.3
• FPNAB: 9.9
• LF1: 7.1
• LF2: 7.1
• LF3: 7.2
• LF4: 8.3
• UF1: 6.4
• UF2: 8.1
• UF3: 8.4
• UF4: 10.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_217552

• Blastp: Epimerase family protein SDR39U1 homolog, chloroplastic from Arabidopsis with 81.82% of identity
• Blastx: Epimerase family protein SDR39U1 homolog, chloroplastic from Arabidopsis with 82.58% of identity
• Eggnog: Epimerase(COG1090)
• Kegg: Link to kegg annotations (AT2G21280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450999.1)
• Pfam: Domain of unknown function (DUF1731) (PF08338.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;