Id Trinity | FTRINITY_DN56358_c5_g1_i8 |
---|---|
Name Transcript | Ll_transcript_217554 |
Sequence | CTCCAATAAGTATTGAAAGCGAGAAAATGTGATATAGAGATATAGAAAGGAGTGTTGGTGTGGCTCCAAATTAACCACGAAACTATAACATAATAACAAC AATTTATATTCACTCAATTCATCATCTTCTTCTTCTTCTTCTTCATTCTGCAACACAGTGCATATACCAAAGTGAGACCACTCAGGCTAGGAGCTTCAGG GTTTTGTGTGCCTCTCATCAAACCCCGAAGGGGAATCAAATGATCATATCCATAACTGGAGCAACAGGTTTTATAGGAAGAAGGTTGGTGCAAAGGCTTC ATGCAGGTTATCCATTAGTTCAGCCTATAACTCCCTAGGCCCTTTCACTTTTTGTTTTATGATATGTGCCCTTTTTTTAGTACATTCATATATGGATCCT AAAATCATTGTGTTCTCATGTCCCCAGCCAATCAAATTTGACCAAATAATAATAAAAAATGTTATTTTATGTTTTTGTAAATTTTCTTTTTAATTATGTC ACACTCTTCCGTCGGATTGAGACAGGGTATGAGATAGGTGATCTCTGTCCATTGATATATAGCCTTTTTCTAGCGCTCTCATGTGGATGAGGATCTGTTG TCCCCAATTATGTCTCCAACTATGTACCAAACCAATCACAATGCAGAAAAAATAAATAAAATGATAAATATTTAATTTTGTAACTGATGTGACATGTTGT TATTGGCTTGGGACAGAGTTCGGGGTTCGGGACAGCAGATCCTTGTCCCCCTCATGTATCTCTAGATTTCAACCTTATTTGTCCAATCCTGGATATCCTG TACTATCAAGGTGCATTCTGGTTGTATTGTCCTCTTATGTTGCAAAATAATTACAAAATATAATTTTGAAGCCTCTTGTGTCAAATAACTGATAAATGGT TGTGTCCTTATGTCATTGCCCTGCATAGTGAATCTGTAGAATCACTGAATTTTGTTAGATCTCTTGCATTCCTCTCTGTATCATTTAAACTCTTTGCTTT TGCTGGTGTAACATTCTCTTCTTAACTAACAATGTTTTGCAGACAATCATAGTGTTCATGTCTTGACCCGTTCTAAATCTAAAGCACAAGAAATCTTTCC GGGTAAGAAGGTAATATATTACAGTAATAATTTGCATTAGTACTCACAGTTAGTAAAAACATATACTGACTACAACTCGTTATCAACTGCAAACTTTTTC CAAAGAACAAAATGACATATCTACTTCACTGAATAAGGGCAAAGCACCTTAAGAATCATATTTGTCATTGTTGGTTTTAATTCATAAATAATCTGGATTC CTCTGCTAATTATTTTTTACCTTTATCTTCTTTGTAGTAGTGGAAAAACTAATAGTTTTCTGTACAACCGGAGTCAAACTCAGATATATACTATACTTCG GATTAACTGGTTAACTCTGCCTTGGTATTTCCAGTGAAAGACTTTCCAGGAATCAAGATTGCAGGGGAGCCAGAATGGAAAGATAGCATTCAGGGCTCAA CCGGGGTTGTGAATTTGGCTGGATTGCCCATAAGTACCAGATGGTCTTCTGAGGTTATTGCCATGCTTTTATCACATCCATTATCTAAATGAATAAATGA TTTAAACTTGAGGTTACATCTAGTGGTGGTTATTTAGAGATAATAGCGTAATAGTCATCTTTCTTTTAATATCTTTTTCCTTGTGTCCGTTAGAACTAAT TTGAGGTTTTTCTTTGCTTGTTGTTAGTATAAGTCTTTCTTTTCTAGTATAACCTACTGAACAACATTTCTTAGAGCCTAGTACCGGACAATACATATAT AACACCAAAAGCATTACATAGATTTTAATGTTGCAGATAAAGAAGGAAATCAAGGAGAGCAGGATTAGAGTGACCTCAAAGGTAAGCATACATCTCCAAC GGATAAAATAATAAAAATATCTTTCTTTTTTCATTTGGCAAAATATATCTTTGCGTCAACTTAAGCAAGAGTTATTTACATGAACCATTTCTTATTCTTC CTCTGACCTATTCATTTCATAGCAAAGGTTGTAGAATTGATAAACAGTTCACCAGATGATACTCAACCTAAAGTTTTTGTTAGTGCAACAGCAGTTGGTT ATTATGGTATGCTTTTAAGCCTAGAATGGTTCTTTATTGGTTGATCATCTTCTTGCTTGTTAATTAATGTTGTCATCGATTATTTTCTCCCTTCTTGTGT AATAATACTTATTGTCATTGATTATTACATTCTTCTGCTAGCAAATGTAGTTATTTTTGTAGCATGTATGATTTTGCATCAAAAGTTTGCTTAACATTTT CATTTGATTTTGCTGTGTTCAGGCAGCAGTGAGACACAAGTTTTTGATGAACAAAGTCCATCGGGAAAGGATTACTTGGCCGAGGTTTGTAGAGAATGGG AATCAACAGCCCTACGAGTAAATGGTGATGCTAGAGTAGCTCTTATTCGTATTGGTGTTGTTCTTGGTAAAGATGGTGGAGCACTAGGTATGAACTACTT AACTACATGCTTCTGGCTGCAAATTTACTATCTAACATGAAATACTATCTAATCTAGTTAGGGTTTTTATTAATGCATTATTCTTGAAAATCATTATATT GTTTGGTTTGACTGATAATTAATTCCTTGAGCCTCTGCAGCTAAAATGGTACCCCTCTTCATGATGTTTGCTGGTGGTCCTTTAGGCTCTGGAAAACAGT GGTATTTAAACTCAGTCACTTGGCTTGTTATAGTTTGCTTTTTAGTACTGTTAATCTATTATTACCGGCACTCGATTAGTGAAGCAATTTCTCCCCTCTG CCTTGCTTTTTTTCTTTCTAAATTGCAAACAAGTGAACAACTCTGTTTGCTGCTAGGATAACCTGCTATGTTAATTTCTAGGTAGTTGTCAACTTGTCAT GATTGCGGGTTTTTTTTTGTACAGGTTCTCTTGGATTCATTTGGATGACATTGTCAATTTAATATATGAAGCACTATTAAATCCATCTTACAAAGGTGAA ACTATTCACTCCCATATTTCCAAATTGAAATCTATCAAAATTCCAAAAAAAGAATGGCAAAGTGTAGGTGATTGTATTACATTAACCTGCAGCCGCAATT AAACTTTAAATTTTGCTATTTCTTCGTGATTACTGCCATCCAATCAACACTCCAAGACTGTATCATAATGAATTTATTTCCTTTTAGGTGTACAATCAAT GGTTATACTTTCTTTTTTCAATGACTATTTGATGAACTTATTGCATTATGAATTTATAATGATTCTTATTTAGGAGTTATAAATGGAACGGCCCCAAATC CTGTCCGATTGTCAGAATTATGTGAGCAACTGGGATATGTCTTGGGTCGTCCCTCGTGGCTGCCGGTACCAGACTTCGCGCTCAAAGCTGTCCTTGGAGA AGGTGCTTCTGTGGTCTTAGAAGGGCAGAGAGTGCTTCCTACTCAGGCTAAGAAGTTGGGCTTCCCATTCAAATATTCCTACGTGAAGGATGCCTTAAAA GCAATTCTTTCATGAAGCACTTTTCTTCTTTGGATTATTGCATCAGCTTTTCCCAGACACAAGTGGCATTCACTGTAGACATTTAAAGGTGGTACAGTTA TGGTTAATTATGATAATGTATAAATATATGATTCTCTTCTGGCATGTGCCACTTTACTACTAGGTGATATGCCATCACCCATTTCTTCCTTAACATTGCT AAATTGCCACTTCATTATAGAGGCAGCCATATTTGTTCACAGCAAAACTTTGCATGATTTTATGAGTTCTATTCTAATGACTATAAATATGAAGATTTTT TATATCACTTCACTATAGATGCTAA BLAST |
Tissue | flowers |
Gene name | LI_gene_59496; |
Additional information | - |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_217554
Blastp | - |
---|---|
Blastx | Epimerase family protein SDR39U1 homolog, chloroplastic from Arabidopsis with 68.52% of identity |
Eggnog | Epimerase(COG1090) |
Kegg | Link to kegg annotations (AT2G21280) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019450999.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |