| Id Trinity | FTRINITY_DN56359_c0_g1_i26 |
|---|---|
| Name Transcript | Ll_transcript_219727 |
| Sequence | ATCTATTCTCCACAAACACAAACTTCTTCTCCTCTCTCTCTCTCTCTCCTTCTCTCTCTGTGCGATGGCACTGTATTCGGTGTCTTCTCTTTCTCAGCTT CTTCGCGCCAATGCTCTCTCTCCGTCGCAACCGTTTCCGATGATTCTTAACGGTCACTTGATCGTTGACTTCGCTGGTCACTCTTCCAAACCAAAACGAC GCAACCGGAGACTCTCCTCTTCGCCGCCGCCGCCGCCGTTTCATTCTCCGAGGTCACGATTCCGTCGTTCATCGCTCAAAGCTGTTCTCGAACTTAACCG ATGCAGCAGCAACATCAACGCTTCTGATGCTTCATCTGATTTAAAGCCAAAGGTTGCGAACTTGGAGGACATACTATCAGAAAGAGGAGCCTGTGGTGTT GGATTCATTGCCAATTTGGAAAATAAAGCATCCCATGAGATTGTCAAGGATGCTCTAAATGCTTTAAGCTGTATGGAACATCGTGGAGGCTGTGGAGCTG ATAATGACTCTGGTGATGGTTCAGGGCTAATGACTGCAATTCCATGGGATCTATTTGACAATTGGGCCAGCAAGCAAGGGATTGCTTCCTTTGATAAGTT ACACACTGGTGTTGGAATGGTTTTCCTACCCAAAGATGTTGAACTTCTGAATGAGGCTAAGAAAGTTGTTGTAAATATCTTTCGGCAAGAAGGTCTTGAG GTGCTTGGGTGGAGGCCTGTCCCTGTAAATGCTCCTGTAGTAGGTTATAATGCGAAGGAGACCATGCCCAACATACAGCAGGTATTTGTTAAGATCTTGA AAGAAGAAAATGTCGATGACATCGAGCGAGAATTGTACATCTGTCGGAAATTAATTGAAAAAGCAGTAACCTCAGAAAGTTGGGGAAATGAGCTTTATTT CTGTTCTTTATCTAATCAAACCATAGTTTACAAGGGGATGCTTCGCTCAGAAGTTCTTGGGTTATTTTATTCTGACCTTCAAAATGATCTCTATAAGTCC CCTTTTGCCATTTATCATCGAAGATATAGCACAAATACTAGTCCCAGGTGGCCTCTTGCACAGCCAATGAGACTTCTTGGCCATAATGGAGAAATCAACA CTATACAGGGGAACTTGAATTGGATGCAATCACGAGAGCCATCATTGAAGTCTCCTGTATGGCGGAATCGTGAAAATGAAATTCGTCCATATGGAAATCC AAAGGCATCAGACTCGGCAAACCTTGATAGTGCTGCAGAATTATTGATAAGAAGTGGTCGTAATCCTGAGGAAGCTATGATGATTCTTGTTCCAGAGGCT TACAATAATCACCCAACTCTGACAAACAGCTACCCCGAGGTGGTTGACTTCTATGACTACTACAAGGGTCAGATGGAGGCTTGGGATGGACCAGCATTGC TGTTATTCAGTGATGGAAAAACTCTCGGTGCATGTCTTGATCGGAATGGACTGAGACCTGCTAGGTACTGGCGTACATCAGACAATATGGTCTATGTTGC CTCTGAGGTTGGTGTTGTGCCAGTGGATGACTCGAAGGTTATCTCAAAAGGCCGATTAGGTCCAGGCATGATGATTACTGTTGATTTACTTGGTGGTCAG GTGTATGAGAATACAGAGGTTAAAAAGCGAGTAGCCTTATCAAATCCATATGGGAACTGGATCAAGGAAAATCTGCGGTCTTTGAAACCTGCGAACTTTC TTTCAGCAGCTGTGATGGAAAACGATGCAGTATTAAGACACCAACAGGCATTTGGGTACTCTAGTGAAGATGTCCAGATGGTGATTGAGAGTATGGCTGC TCAAGGAAAGGAGCCCACATTTTGCATGGGAGATGATATTCCACTGGCAGCGTTGTCTCAGAAGCCTCACATGCTTTTCGATTATTTTAAGCAACGCTTT GCACAGGTGAGCTAGAGTATTTTCTGACAAATTATTCTATTAAGTAAATTCTTTTGTTAACTGTAACTAAATTTTGATGCAATGGATTTGTATTGCAAAG GCACTATGACAATGTTTTACTATATATTATTGCTGTTTACTGTGCCATAAGATACATGATACTGCTGTCTGTATATGGTATTCATTATATGCCTCTCATT AAACTCTGCATATCTCTATCCTTTTGTGTATCTATCTGTGGATTCGTGCATGTAAGGTTCATTTCTTTTCCAGATGAGCTAAGATATCATTAAGCTTTCT TACTATCATGTACTTTTTCCCTCTTGTTTCCCTTCTACATGGGTTTTAGAAGGGGACCCTGTCCTCTTGTTCCTTTTTTGGGGGTGGGGGGTTGAGGGAC AGAGAAGAATCTGTTCAGATGCAAGATGGACTTTTTTCATCACTCGATGTGGAATATTTAATTGTTGATCTTGTTGAAGCCTGAAGGTTATTATGACCTT GAATAATCGGGATGATTGGTTCACAAACAAAATCTGTACTCTTCATAAACCAAGAAAGAGTTCAAATGAGTAAGCATGGTTCACTCAATCTGTTGGAAAA TATGTTTTTCTCATGCATTTGTTGGTGTTACTTCCATTCCAGTTTAACATCGGAGACTCACAAAATGGCACAACTGAGGATTTAGTACTTACTCTACAGA TCCATATTTTTAAATTATTCTAGTTTTCTAAGCTTTTATTTGACATGCACTATTCTTAACTGATATGTACCCACCATATCTCTTTATAATGCTCTTCAGT TTAATTTCCTATGTGACTACCCCAGTTTTATTCATTTTTCGAAGTACAGGTTACAAACCCTGCTATTGATCCTCTTCGTGAAGGATTGGTTATGTCTCTT GAAGTCAACATTGGGAAACGGGGGAATATATTGGAAGTTGGACCAGAGAATGCTTCACAGGTTATATTGTCTAGTCCAGTATTGAATGAAGGGGATCTTG AGTCATTACTAAAGGACACACACTTAAACCCACAAGTATTGCCTACATTTTTTGATATATCTAAGGGGGTTGATGGTTCCTTGGAAAAAGCATTAAGTAA GCTTTGTGAAGCTGCAGATGAAGCTGTTAGAAATGGTTCCCAGTTGCTTGTTCTTTCAGACCGTTCAGATGAACTGCAACCAACACATCCTGCAATTCCT ATACTTCTTGCTGTTGGTACTGTTCATCAGCATCTAATTGAGAATGGCCTGAGGACGTCAGCTTCAATTTTAGCTGATACTGCTCATTGCTTTAGCACTC ATCAGTTTGCATGTTTGATAGGATATGGTGCAAGTGCTGTTTGTCCATACTTGGCATTGGAGACATGCCGGCAGTGGCGATTGAGTAACAAAACTGTAAA TCTGATGAGGAATGGAAAGATGCCTACTGTATCAATTGAGCAAGCACAGAAAAACTATTCCAAGGCTGTAAAAGCAGGTCTTCTTAAAATTCTTTCCAAA ATGGGCATCTCATTACTTTCAAGTTACTGTGGTGCACAGATATTTGAAGTTTATGGGTTGGGGAAGGAAGTTGTCGATGTTGCATTCAGAGGAAGTGTGT CAAAAATTGGTGGATTAACTTTTGATGAGCTGGCAAGAGAGACCCTGTCTTTCTGGGTGAAAGCATTCAGTGAAGATACTGCTAAAAGATTGGAAAATTT TGGATTTATACAGTTCAGACCTGGGGGGGAGTATCATGCAAATAATCCTGAGCTGTCAAAGTTGCTCCATAAAGCTGTTCGTCAAAAAAGTCAAAGTGCC TTTTCAGTTTATCAGCAGCATTTGGCTAACCGACCTGTTAATGTTCTTCGTGATCTTGTTGAGTTTAAAAGTGATCGTTCTCCAATACCTGTGGGGAAGG TTGAACCTGCTTCATCTATTGTTCAAAGGTTTTGCACTGGCGGGATGTCACTTGGAGCTATTTCGAGAGAAACTCATGAAGCAATTGCAATTGCAATGAA CAGATTAGGTGGAAAATCAAATTCAGGGGAAGGTGGTGAGGATCCTATTCGCTGGAAACCACTTTCAGATGTTGTTGATGGTTACTCTCCAACTCTTCCT CATCTTAAAGGTCTTCAAAATGGGGATACTGCTACCAGTGCTATCAAGCAGGTTGCTTCTGGAAGGTTTGGTGTCACCCCAACATTCTTGGCAAATGCTG ATCAAATTGAAATAAAAATTGCACAAGGTGCAAAGCCTGGTGAAGGTGGACAATTGCCTGGGAAAAAAGTTAGCATGTATATTGCACGGTTGAGAAATTC TAAGCCTGGGGTTCCTCTTATATCTCCACCTCCTCATCATGACATTTATTCTATTGAGGATCTTGCTCAACTGATATTTGATCTTCATCAGGTAAACCCT AGGGCCAAGGTGTCAGTAAAACTGGTTGCTGAAGCTGGAATTGGCACTATTGCATCTGGGGTTGCTAAGGGAAATGCTGACATTATACAGATTTCAGGGC ATGATGGTGGAACGGGAGCAAGCCCTATAAGTTCCATCAAGCATGCAGGAGGTCCTTGGGAACTTGGACTTACAGAATCTCACCAGACACTAATAGAAAA TGGACTTAGAGAAAGGGTCATTCTCAGAGTTGATGGTGGCTTTAAAAGTGGAGTTGATGTCATGATGGCAGCAATAATGGGTGCTGATGAATATGGGTTT GGGTCAATGGCAATGATTGCTACTGGGTGTGTTATGGCCCGCATTTGCCACACCAATAATTGCCCAGTTGGAGTTGCCAGTCAGAGGGAAGAGTTGCGTG CACGCTTTCCTGGTGTTCCTGGAGATCTCGTCAACTTCTTTTTATATGTTGCTGAGGAGGTAAGAGGCATATTGGCACAACTGGGGTATGAGAAATTGGA TGATATAATTGGCCGGACAGACTTGTTGCGACCAAGAGACATCTCTCTACTGAAAACTCAGCACCTAGATCTAAGTTATCTCCTCAGTAATGTTGGGTTG CCTAAATGGAGTAGTTCAACAATCAGGAATCAAGAGCCTCATACCAATGGTCCTGTTCTTGATGATGTTTTGCTAGCAGATCCAGAGATTGCAGATGCCA TTGAAAATGAAAAAGCGGTTAGTAAGACTACAAAAATATACAACATCGATCGTGCTGTTTGTGGGCGTATAGCTGGCGTCATTGCAAAGAAGTATGGCGA CACTGGTTTTGCTGGACAGTTGAATCTAACATTTACAGGAAGTGCTGGGCAGTCATTTGCATGCTTTTTAACACCTGGAATGAACATACGACTTGTTGGA GAGGCTAATGACTATGTGGGCAAGGGCCTTGCTGGAGGTGAGTTGGTTGTCACTCCAGTTGAAAAGACGGGATTTCGACCCGAGGATGCAACTATTGTGG GGAACACTTGCTTGTATGGAGCAACAGGTGGACAAGTCTTTGTTAAAGGGAAAGCTGGGGAGAGATTTGCTGTGAGAAACTCACTTGCCGAAGCTGTGGT TGAAGGCACAGGAGATCATTGTTTGGAATACATGACTGGTGGCTGTGTGGTTATCCTGGGAAAAGTGGGTAGAAATGTAGCTGCTGGAATGACTGGAGGG TTGGCTTACATTCTTGACGAGGACAATACTCTTATACCCAAGGTAAACAGAGAAATTGTAAAAATCCAACGAGTGTCAGCACCTGTGGGGCAGATACAGC TGAAGAGCCTAATTGAAGCCCATGTTGAAAAAACGGGAAGTAACAAAGGTGCAGCTATTCTGAAGGACTGGGAAGAGTACTTGCCACTATTTTGGCAGCT GGTTCCACCTAGCGAAGAAGACACTCCTGAAGCTAATCCCAAGTACGACACAACTACTGCAGAACAGGTCACTTTTCAGTCTGCTTAGGATAATAATACG AGCCTCGATTACGCCAGGCCTTGGAGCCATTGTTGTGTCCTTGCTTTGTACAGGAATTGAAGAAGGTATATGATTAGGGTGGAGATGCTAACCAAAATAT GGGATATACTAATTATCCCATGTAACCAAAGGGATGCATCCATTCTGAAGGTCGTATTTGCCATTAGTTCCAAGCAACCCTTGTACATCCCATTTGAAGC ATTAGCCTTCCCTTCACTTCAAAACTTCAGTATAGGACTATAGGCATTTGAAAGAAAAACTCTAAATAAAATGCTGTTCATGTGAATCTGTTTTGAAAGT TTGTGGATGGTGAAAATAAATTACTGGATTCATATGTCTGATCATCTCTCATCTGTCTGATCAAATGAAAAATTAATGTTTTTCACATGCACTGTTGAAA TACTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_59503; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_219727
| Blastp | Ferredoxin-dependent glutamate synthase, chloroplastic from Spinacia with 87.27% of identity |
|---|---|
| Blastx | Ferredoxin-dependent glutamate synthase, chloroplastic from Spinacia with 86.8% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437056.1) |
| Pfam | Glutamate synthase central domain (PF04898.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |