Ll_transcript_219408

• Id Trinity: FTRINITY_DN56363_c1_g1_i4
• Name Transcript: Ll_transcript_219408
• Sequence: CTTAAGAATATCAATCGTTAAAATTATTTAAATTAAGGTAAACAGTTTTTCTTCATCAAAAGGCGCTGCTCATATCGAACCATTCCCTGACACTTTTTAT TGCAAAAAACAGCATATGAGTTCCCTCCAATCTCTGTGTTCCAACTTTCACTTAATAAAAATAAAGTTGCAACCTTTGGTAAGTTCTCATTCTCTTTGAC CATCAACTACAACATGACCAAAACCTTTCTGTATGATAAAGGTGATGTCTTTTTGCCTCAATCAGAACAACCATCTTCTTTTATTTCTCACTCAAACCCT CCTTCCCCATCAAATATTCAATCTAATACTTTCACTTTCAATGATAAGGTTCTAAAGCTTAGTCCAAGTATACTACTCATTATTATCATTCTAGCCATTG TTTTCTTCATTTCTGGTTTGCTTAACCTCCTAGTTAGATTCCTATGGAGAGCTCAACATAGAGATCCTAGTGATTTGGATAGTGTTACTGCAATTCAAGG CCAATTGCAGCAACTTTTTCATTTACATGATGCTGGGGTTGACCAGTCTCTTATTGATACCCTCCCAGTGTTTAATTACAAAGCCATTATAGGATTGGAG GACCCTTTTGATTGTGCTGTTTGTTTGTGTGAGTTTGAGCCTGAAGATAAGCTTAGATTGTTACCAAAGTGTAGCCATGCCTTTCACATGGAGTGTATTG ATACATGGCTTATGTCACACTCTACTTGTCCTCTTTGTAGAGCTTGCTTGATCCCTGAGTTTTCCTCAAACAATACATGTACTCCTTTTGTTTTTGTTCT AGAATCTGGGAGTGAGAGTTCAAGGGAGATTGTTCCTGAAAGAGAGGGTACTACTGCTTCTGTTGTTGGAAGAACTAGTTCAGTTATAACAGCAAATTCC CGTCTTGGTGGTAGTGAATTTGGATCTACTAGAACTGATTTTACAAGGAAATCAGGTGATTTGATTTCAAATGAGAATCCTATTCCTGATTCAACTTTAG AAGGGTATGGTATGGAAAAGGTTGTGACTGTGAAGCTAGGAAAGTTTAGGAATATGGATGGTGATGTTGTTGGCCATGGTGAAGGAAGTAGTAGAACCAA TAATATAGATGATAGAAGGTGTTTTTCCATGGGGTCATTTTCTTATGTTATGGATGAGAGTTCTTCACTTCAGGTACCAATAAGAACCTCAATCATGAAG CAATCAAGTGAGAAGAAGTGTGTGTTGTCTTTGGCACCAGGACACAGGCTTGCAATGTCTGAATGTGACTTTGAATCAAAAAGAGATTTCAAACTTGCAG GCTTTGATAATGCAATTAATACATCAGTTGAGAATCTTGGCTGTAGTGGTAATGGAGGTTCTGCTATTGTAAAGAGCAGAAAAGAGAGTTTTTCTGTATC AAAGATTTGGCTGAGAGGGAAGAAGGAGAAGCCTAATGTTGTGGCGGTGGCTGATTCGTCGAGAAGGGCTGTTTCGCTCCGGTATCCAGCTGCTGTTAGT GATGATTTGAAGGCCAAGAATGGAAAATTTGACACAAGGAGTTCTATTTCTGAGATGGATATTGGGAAATGGGAGAATGGAGGAAGTGAATTTGTGAATT ATGAGGAAAATCAGAGCTGCTATAGTATTGATTCTGAAGCTAGAGCAACTTCTTTTGCTAGAAGGACTTTGCTTTGGCTCATTGGAAGACAGAATAAGAA ACTTGATAGAGTGGAGCTTAACCTCATGAAACGACGTCGCTGATTTATCAGAGATGGGTGAAGGAGAAGGTGAAATGGCGAAGGTGAGAACAAAACCAAT CGTGCGATTGGGGATCTTTCTCATCTCTCATAGTTCCTTTGTCAGTGTAATTTGTTTGATAGCAGCGGTTGTTGCTCTTCTTCTTCTCCCAGTTCTGGCC AAGAACACCTACATTTCCGAAAATGCCCTCATGCCAGGTTCTGCAAACAACATGCTGTCTACTCAAGATGCCTCTGAAGCAAATAAATTGGTCAATGACT TAACTCATTTGGGTTTGAGATCACCCATTGAAAGTCAAAAGATTGTGGGGCAGTATATGTCAGGCTTGGATGCTGAAGTCACGTATCATAAGTTCTATCC TCAGTTAAATCGGATCCATCCCTTGCACTTTTTTACCAGTCCTGATTCGGGCATAAGTTCGAAAACCTTAAATTGTTCATTACCTGCATTCAACACTGTT GGAATTATTAGAGCGCCACGCGGGGATGGCAAGGAAGCTATTGTCTTGGTAACGCCTTACAATCCAGAGAAAAACAATGTGGGGGAGGCTCTGTCTTTGG GAATTGCGTACTCGGTATTCTCTTTGCTTTCACGGGTTACTTGGCTGGCAAAGGATATCGTATGGCTTGTGGCTGATTCACGATATGGGGAATATTCTGC GGTGGATGCTTGGCTAAGAGAATATCACAACCCTGTTTATGGAGTCCACATGGTTGATAGTGAAACATGTAATAAGGGCAATACTACTAATGCACTTGAA CAGAAGCTTTATGTTGATAAAAAGTTTTACAGTGGTTTTAGACGAGCAGGGACTATGGCTGCAGCCTTAGTAATTAAAGTCGCTGAGGACGGTAACCATT TTGAAGACGGTCTTAATATATATGCTGAGGCTTCCAATGGGCAGATGCCAAACCTTGACCTTATCAACATCGTAAATTATCTAGCAGTGCACAAACAAGG TTTAAGGATAAAAGTAAAGAAGATATTGTCTCTACTTGGATTGAGATGGCTCAATACCTTGGGTGTTATATTTGAATCAGTTGGACAAATTGCTAGAAGC TTAAATCCTGAGTGGAAATTTGGTATTCCTGCTAGTGAATATGTCGAGGGCACTGCTACACTGGCAAGTTCATTGTATTACCAGGGTTTGGGTGTTCCTA CTGGTCCTCATGGTGCCTTTCGTGATTATCAAGTTGATGCAATTACTCTGGAAATTTCACCAAAAGTTTCGCTTACTAAAATGATCAGGCGCAATGATTT CATTCTCCGTGGTGGAAGGTTGATCGAAGGAGTTGTACGCTCAATAAACAACCTTCTCGAGAAGTTTCATCAGTCATTCTTTTTGTACCTCTTAACATCT CCTAGTAAGTTTGTTTCAGTTGGAGTTTACATGATTCCATTTGCATTACTCGTTGCACCACTTCCACTAGTTGCAGCATCTCTCCACGCTGATGCTAGTA AATCCACAACGCCCCAAAACACTGGAGATGATGTCAGCTGCAAATCTTGGAAATGGCTGAACTCAGCCCAAAAGGTTTTCGTCATTCATCTTTGGGGCAT CACTGTCACACTACTCCCATATTTCCTATGTCGAATACCACATTCCACTCCAACAAACAACTTTACACTTTGGGGTTTGCTATCAGCTTTTAGCCTCTTT ATTTTGTACTGGATTTTAGGTTCTTCGGTTTTTGAAGCTTCCACATCTAAACCTCAGAAAAGAGAATGGGCCAGCTTAAAATCAGTAACTATAACAGCTG CTTTCATTGGTTTGTCTCTCATGTCAGTCATTAACTTCGCTACAGCACAAATTGGTGCTTTATTTATCGTCCCGGTTTGTCTCATGGCTCGGCCGTTAAG GCATGATGCTCTAGCTAGGAGCCTGGGAACTTTACTAAGGGCCAGTTTAAACCTTGTTTTAGGTTTTATTGCATTTCCTCCTGTTGCATATGTTTTATTG AAAGTTGCATTTGATGATGTTGATGGTTTTAATGTTGGTGAGTATTGGAACTGGATGGAATCTCTTTGGGCATGGAACAGTGCTACTTACCTCTATGTAG GCATTGTGCACCTACCTTGCTGGGCACTGTGTATTCACATTTTATTTCATCCTTGTTGACTTTGTACCATTAGTTAGTTCGACAAGCAGTTTATTGTCTT GATGTTTATGCTTTCATCTTTATAATGCATATCGTTTTTCTCTGCCA
• Tissue: flowers
• Gene name: LI_gene_59527;
• Additional information: details;

Expression of Ll_transcript_219408

FPKM

• FPAB: 0
• FPNAB: 0
• LF1: 0.8
• LF2: 0.8
• LF3: 1.4
• LF4: 1.7
• UF1: 1.8
• UF2: 1.2
• UF3: 1
• UF4: 0.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_219408

• Blastp: Putative RING-H2 finger protein ATL49 from Arabidopsis with 45.17% of identity
• Blastx: RING-H2 finger protein ATL13 from Arabidopsis with 47.1% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT2G18650)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453960.1)
• Pfam: Anaphase-promoting complex subunit 11 RING-H2 finger (PF12861.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;