Id Trinity | FTRINITY_DN56363_c1_g1_i5 |
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Name Transcript | Ll_transcript_219409 |
Sequence | CTTAAGAATATCAATCGTTAAAATTATTTAAATTAAGGTAAACAGTTTTTCTTCATCAAAAGGCGCTGCTCATATCGAACCATTCCCTGACACTTTTTAT TGCAAAAAACAGCATATGAGTTCCCTCCAATCTCTGTGTTCCAACTTTCACTTAATAAAAATAAAGTTGCAACCTTTGGTAAGTTCTCATTCTCTTTGAC CATCAACTACAACATGACCAAAACCTTTCTGTATGATAAAGGTGATGTCTTTTTGCCTCAATCAGAACAACCATCTTCTTTTATTTCTCACTCAAACCCT CCTTCCCCATCAAATATTCAATCTAATACTTTCACTTTCAATGATAAGGTTCTAAAGCTTAGTCCAAGTATACTACTCATTATTATCATTCTAGCCATTG TTTTCTTCATTTCTGGTTTGCTTAACCTCCTAGTTAGATTCCTATGGAGAGCTCAACATAGAGATCCTAGTGATTTGGATAGTGTTACTGCAATTCAAGG CCAATTGCAGCAACTTTTTCATTTACATGATGCTGGGGTTGACCAGTCTCTTATTGATACCCTCCCAGTGTTTAATTACAAAGCCATTATAGGATTGGAG GACCCTTTTGATTGTGCTGTTTGTTTGTGTGAGTTTGAGCCTGAAGATAAGCTTAGATTGTTACCAAAGTGTAGCCATGCCTTTCACATGGAGTGTATTG ATACATGGCTTATGTCACACTCTACTTGTCCTCTTTGTAGAGCTTGCTTGATCCCTGAGTTTTCCTCAAACAATACATGTACTCCTTTTGTTTTTGTTCT AGAATCTGGGAGTGAGAGTTCAAGGGAGATTGTTCCTGAAAGAGAGGGTACTACTGCTTCTGTTGTTGGAAGAACTAGTTCAGTTATAACAGCAAATTCC CGTCTTGGTGGTAGTGAATTTGGATCTACTAGAACTGATTTTACAAGGAAATCAGGTGATTTGATTTCAAATGAGAATCCTATTCCTGATTCAACTTTAG AAGGGTATGGTATGGAAAAGGTTGTGACTGTGAAGCTAGGAAAGTTTAGGAATATGGATGGTGATGTTGTTGGCCATGGTGAAGGAAGTAGTAGAACCAA TAATATAGATGATAGAAGGTGTTTTTCCATGGGGTCATTTTCTTATGTTATGGATGAGAGTTCTTCACTTCAGGTACCAATAAGAACCTCAATCATGAAG CAATCAAGTGAGAAGAAGTGTGTGTTGTCTTTGGCACCAGGACACAGGCTTGCAATGTCTGAATGTGACTTTGAATCAAAAAGAGATTTCAAACTTGCAG GCTTTGATAATGCAATTAATACATCAGTTGAGAATCTTGGCTGTAGTGGTAATGGAGGTTCTGCTATTGTAAAGAGCAGAAAAGAGAGTTTTTCTGTATC AAAGATTTGGCTGAGAGGGAAGAAGGAGAAGCCTAATGTTGTGGCGGTGGCTGATTCGTCGAGAAGGGCTGTTTCGCTCCGGTATCCAGCTGCTGTTAGT GATGATTTGAAGGCCAAGAATGGAAAATTTGACACAAGGAGTTCTATTTCTGAGATGGATATTGGGAAATGGGAGAATGGAGGAAGTGAATTTGTGAATT ATGAGGAAAATCAGAGCTGCTATAGTATTGATTCTGAAGCTAGAGCAACTTCTTTTGCTAGAAGGACTTTGCTTTGGCTCATTGGAAGACAGAATAAGAA ACTTGATAGAGTGGAGCTTAACCTCATGAAACGACGTCGCTGATTTATCAGAGATGGGTGAAGGAGAAGGTGAAATGGCGAAGGTGAGAACAAAACCAAT CGTGCGATTGGGGATCTTTCTCATCTCTCATAGTTCCTTTGTCAGTGTAATTTGTTTGATAGCAGCGGTTGTTGCTCTTCTTCTTCTCCCAGTTCTGGCC AAGAACACCTACATTTCCGAAAATGCCCTCATGCCAGGTCAACTCACTCTCATTTCATTACTATTCCTGCACAAACACAATAACTTTTTAGTCTCTTACA CTCTTGCATGTCTAAAATGGTAAATTACCTATTTCACTAAGGAGTTTACAAGCCTATGTTTTACATTAACTTGGTCTCAAAATTTAATATTTGGATTGAG TTACTTCTATGTTTATATATAGAATTTGTAAAGCTAGTTTTACATTTTTAGTAAGTGTTTAACTAAAAGTTATATTATTATTGGGACAAATATTGAGTTG TGTTTATATTCTATTACCTTAATTAGTTTTGTTATGAAGTTTCAATGATGAATTTGTTTTTATATACGTGATTAACCTATGTTTAGTACTTAGTATATAT ATTTTGAAATAATATTCTTGATATCTGTACCCGACTCGAGCTAATGTTTTGAATTCTCTAGACCTATATGAGTTTACTTGAGCTCTCGAATATGACAACT ACTATTATTCATTGTTGAGCAGGTTCTGCAAACAACATGCTGTCTACTCAAGATGCCTCTGAAGCAAATAAATTGGTCAATGACTTAACTCATTTGGGTT TGAGATCACCCATTGAAAGTCAAAAGATTGTGGGGCAGTATATGTCAGGCTTGGATGCTGAAGTCACGTATCATAAGTTCTATCCTCAGTTAAATCGGAT CCATCCCTTGCACTTTTTTACCAGTCCTGATTCGGGCATAAGTTCGAAAACCTTAAATTGTTCATTACCTGCATTCAACACTGTTGGAATTATTAGAGCG CCACGCGGGGATGGCAAGGAAGCTATTGTCTTGGTAACGCCTTACAATCCAGAGAAAAACAATGTGGGGGAGGCTCTGTCTTTGGGAATTGCGTACTCGG TATTCTCTTTGCTTTCACGGGTTACTTGGCTGGCAAAGGATATCGTATGGCTTGTGGCTGATTCACGATATGGGGAATATTCTGCGGTGGATGCTTGGCT AAGAGAATATCACAACCCTGTTTATGGAGTCCACATGGTTGATAGTGAAACATGTAATAAGGGCAATACTACTAATGCACTTGAACAGAAGCTTTATGTT GATAAAAAGTTTTACAGTGGTTTTAGACGAGCAGGGACTATGGCTGCAGCCTTAGTAATTAAAGTCGCTGAGGACGGTAACCATTTTGAAGACGGTCTTA ATATATATGCTGAGGCTTCCAATGGGCAGATGCCAAACCTTGACCTTATCAACATCGTAAATTATCTAGCAGTGCACAAACAAGGTTTAAGGATAAAAGT AAAGAAGATATTGTCTCTACTTGGATTGAGATGGCTCAATACCTTGGGTGTTATATTTGAATCAGTTGGACAAATTGCTAGAAGCTTAAATCCTGAGTGG AAATTTGGTATTCCTGCTAGTGAATATGTCGAGGGCACTGCTACACTGGCAAGTTCATTGTATTACCAGGGTTTGGGTGTTCCTACTGGTCCTCATGGTG CCTTTCGTGATTATCAAGTTGATGCAATTACTCTGGAAATTTCACCAAAAGTTTCGCTTACTAAAATGATCAGGCGCAATGATTTCATTCTCCGTGGTGG AAGGTTGATCGAAGGAGTTGTACGCTCAATAAACAACCTTCTCGAGAAGTTTCATCAGTCATTCTTTTTGTACCTCTTAACATCTCCTAGTAAGTTTGTT TCAGTTGGAGTTTACATGATTCCATTTGCATTACTCGTTGCACCACTTCCACTAGTTGCAGCATCTCTCCACGCTGATGCTAGTAAATCCACAACGCCCC AAAACACTGGAGATGATGTCAGCTGCAAATCTTGGAAATGGCTGAACTCAGCCCAAAAGGTTTTCGTCATTCATCTTTGGGGCATCACTGTCACACTACT CCCATATTTCCTATGTCGAATACCACATTCCACTCCAACAAACAACTTTACACTTTGGGGTTTGCTATCAGCTTTTAGCCTCTTTATTTTGTACTGGATT TTAGGTTCTTCGGTTTTTGAAGCTTCCACATCTAAACCTCAGAAAAGAGAATGGGCCAGCTTAAAATCAGTAACTATAACAGCTGCTTTCATTGGTTTGT CTCTCATGTCAGTCATTAACTTCGCTACAGCACAAATTGGTGCTTTATTTATCGTCCCGGTTTGTCTCATGGCTCGGCCGTTAAGGCATGATGCTCTAGC TAGGAGCCTGGGAACTTTACTAAGGGCCAGTTTAAACCTTGTTTTAGGTTTTATTGCATTTCCTCCTGTTGCATATGTTTTATTGAAAGTTGCATTTGAT GATGTTGATGGTTTTAATGTTGGTGAGTATTGGAACTGGATGGAATCTCTTTGGGCATGGAACAGTGCTACTTACCTCTATGTAGGCATTGTGCACCTAC CTTGCTGGGCACTGTGTATTCACATTTTATTTCATCCTTGTTGACTTTGTACCATTAGTTAGTTCGACAAGCAGTTTATTGTCTTGATGTTTATGCTTTC ATCTTTATAATGCATATCGTTTTTCTCTGCCA BLAST |
Tissue | flowers |
Gene name | LI_gene_59527; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_219409
Blastp | Putative RING-H2 finger protein ATL49 from Arabidopsis with 45.17% of identity |
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Blastx | RING-H2 finger protein ATL13 from Arabidopsis with 47.1% of identity |
Eggnog | zinc ion binding(ENOG41121N2) |
Kegg | Link to kegg annotations (AT2G18650) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453960.1) |
Pfam | Anaphase-promoting complex subunit 11 RING-H2 finger (PF12861.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |