| Id Trinity | FTRINITY_DN56371_c1_g2_i19 |
|---|---|
| Name Transcript | Ll_transcript_217491 |
| Sequence | GAAAATATCTGATAGATCTTATTCTTTCTCGACTCTGTCCCATAAAAGCTAAAACCCTAACATTTGAAGATCTCACCTCAACGCGAGGGAATCCCCGCCG AATCAAAGTGAAAATGAGTAGACGTTCCAGCAGAACTATCTACGTTGGGAATCTACCCGGTGATATTCGTGAAAGAGAAGTCGAAGATCTGTTTATTAAG TATGGACACATAGCTCACATTGACCTGAAGGTGCCACCAAGGCCCCCTGGTTACGCATTTGTGGAGTTTGAAGATTCTCAAGATGCTGAAGATGCAATTC GTGGGCGTGATGGCTATGATTTTGATGGGCACCGATTACGGGTGGAGCTTGCACATGGTGGGCGTGGTAATTCATCTTCAAGAGGAGACCGATATAATAG TCGCAGCAATGGACGAGGTGAAGGTGGACGTGGGGGTGGGATATCTAAGCGCTCTGATTACCGTGTTCTTGTCACAGGGTTGCCCTCTTCAGCTTCCTGG CAGGATCTTAAAGATCACATGCGAAAGGCAGGGGATGTTTGCTTCTCCCAAGTTTTTCGTGATGGAAGAGGTACAACTGGTATTGTGGACTACACCAACT ATGATGACATGAAATATGCTATCAAGAAGCTTGATGACTCTGAGTTTAAGAATGCCTTTTCCAGGGGTTATGTTCATGTGAGAGAATATGATTCAAGGAA GGACTCTAGAAGTCCTAGTCGTGATCGATCTTATTCCAGAGGAAGAAGCTATAGTCGCAGTCGTAGCCGTAGTTACAGTCCGGGCCACAGCCGAAGTAAA TCTCCAAAGGGCAAATCTTCACGCAGTAAATCTCCAAAGGGCAAATCTTCACGCAGTAAATCTCCAAAGAGCAAACCTTCACGGCTTTCACCAGCTAAAT CTCCTCCGCGGTCTGCTTCTCATTCTCGCTCAAGGTCAAGGTCCCGCTCTTTATCAAGGAATGTGCACTGTTCAATAGAGCTCACCCAGAAAAGGCATAT GGAATGGGGGAACACAGGGTACCATGGATATCCATAATGAGCTGAATATAAGTAATTGGGGTTTTAATTGACGGACCAATTGAATTCTTTTGTGTCATGT CTTAGCAAACATAATTTTAACACCTCAATTTCACCAACTACCAAGTCCTGTTGAAGTCAGTTATGTTTACCTTATGTCGCTTGTTTGATAAGTATAAAGA CTGTTACTTGTTACATTCAACACCTTCCCCCATCGACAATAAAAGAAAATGAGAATTTTGTATGTTAATACAACATTATTAATCTGTTATTCTCAATAAA AAAATCCTGACAAACTGTTGCTCTCTTCCCTTTCCCTCTGTCTGTTTTTCTTTCTTCCACACTTGGTTTGCGGGTTCCTGACAGAACATCCCTCCTAGCC ATCGTGTTCACTTTCACTCTCGTTTTACTTTTATTTTTTAAGAATTCTTTTTTATTTTTGTGGTTTTTTATCCTTAGACATGGATACTTCAAGCAATCTG GGAATTGAAAATTAGAAACTTGATTGGATATGGTTCCAGTTGACTGCAACTCAATTTGTTGTGGAGGTATGATATTTTTTTAGATGGGGGCTTTGGATCC CTTCAAAGTACATCTGTTCTAATGCTTTTAGCTTGTAAATGACCCTGGGTGCTAGATTGGGAACAAAGGAGATCATCAATTGCTATTTTATAGCTGCATG TATTGTGTATAAAGACAACTGGGATTTGGGAATCACCACCAATGAGCAATAGAAACACTTTCCATATGATGTTGGCTTCAGGATTCGCCAAACCAATAGG GTGCAGTATCTGGATTCTCTGGATTTTGTGGTGCAATAGGGAAGATTTCTTGTATCCAGATCTCTGTTTTAATATGTTAGTTTGTGATGCTCATGCATAG GATGTCTACAAATTTCCCCTTTTTGCTTTCTCTACCTCCCAGGTTGCTATCTAATTTACAATGTTTGTTTTTACCTCTTCTGGGCATGATATGTGACTTG GGAGAGGAATCAAGGCTGTTGGATTCTATTTGATAAGGGAACTTGTGGATTTTTAAATTCTGTTTGTGGAACTTTTGCAGATCACTATCAAGATCAAGGT CTCCTTTGCCATTGCGTAATAAGAGCCCAAAAGGACGCAGTGCTAGCAGAAGCCCAAGTGAGAGCCCAAAAAGGCGCAGTGCTAGCAGAAGCCCAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_59600; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_217491
| Blastp | Serine/arginine-rich-splicing factor SR34 from Arabidopsis with 74.51% of identity |
|---|---|
| Blastx | Serine/arginine-rich-splicing factor SR34 from Arabidopsis with 71.79% of identity |
| Eggnog | Rna-binding protein(COG0724) |
| Kegg | Link to kegg annotations (AT1G02840) |
| CantataDB | Link to cantataDB annotations (CNT0000194) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428256.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |