Id Trinity | FTRINITY_DN56374_c0_g1_i13 |
---|---|
Name Transcript | Ll_transcript_218155 |
Sequence | ATTTGTGATCCGCTGGAGTTGTACACAACAAAACCTTACCCCAATTGCGGCGACCCTTCATTCCCTATTTTCTCTTTGTCTTTTCTTTGATGTGGAATTT TACTATTGGAATAATAAGAGAAAGAAAAATAAATAAATAGTTATAAAAAAAGACTCTATTCTGGTTTTTAATCTTCCTTTCATATCTATGTTTATTATAA AGCACAGATCCTTCTTCTCTTCTTCTTCTTCCTCCTGACCCTTTTTTCCTTTCCTTCACAGGGAAGGAGGAACAAAGAAGAATTTAGTATAAATAAATAA ATAATTATTTTATTTATTTAATATTTTTCTCTGAATTGAAACATGGATACGTTGTCTCTATCAAACGATGCCGTTTCTGTTTTGAAGGAGAAGGAGTCAA TGGTTGACCCCTTCTTGGTCGAGGCTCTTCAGAATCCTCGTCACCGTCTTACTATTTTGCGGATGGAGCTGGATATCCAGAGGTTTCTGAATAATGCTGA TCAGCAGCATTTCGAGTTCCAACATTTTCCTTCTTCCTATCTCCGACTGGCTGCACATCGTGTTGCTCAATACTATGGTATGCAAACCATGGTTCAAGAT AATAGCTTAGACGGTCAGGGAAGTAAAATTCTGGTGAGAAAGCTAGCAGAAAGCAAGTATCCAATGGTTCGCTTATCTGAAATACCTGTGAAACAGTTGG AAAATGATAAATCGGAGCCGAAAAAAATTGTCCTCAAACCCAGGCCTAATAAAAATAGTTTCAATGGAGCCAATGAAGCCAGTAAAAAAGGAAATCATTG GAGAAGTGTGGAAGAGAGGATGGAAGAATATGATCGGGCACGGGCACGCATCTTTAGTGGCTCTAGAAGCTCTGATTCAGGTGAAGTGCAATCCCTGATT CCAGTGGATGGGTCTTTGATGAGCAAGGATGAGAATGAAACAAGCAAGAACCCTGTGGCTGATTCAGAAAGAAGCTTAAGTGTCAGGGATATTAATTCTA CTCGAGTTGCCATTTTCAGAGATAGGGAAAAGGACCGTATCGATCCTGATTATGATCGAAGCTATGGAAGGTATGTTAGGAGTATTCCAGCCCCTGCTGT TAACTTGGTGCCTATGAATTTTCAAAATGCTCAACCATCATTTGCTCAATATGATACTACTTTTAATCAGTTGGCTCAGATGCCACAATCTCAACCTTCA CTTGGTTATGTACCTCATGCAAGCCCGATAATGACTCCTTTTTGTGCCACGGGATTGAACCAGACACCTAGGGAGGGTGCTTACCTACAGTGGCCAAGTC CTGCAATGATGTATGCACATTCATATGACCAATTTAGACATGCTGTTTTCCGGCCTCCATTTGGTCAACAACCCTTGAGCTTTGACTCTTCACAGAACTA CTAGATGACATTTAAAGGGGACTTTCAATTTGAATGCATAAGTTATTTTAGATCTTTAGACTTTCATAGTAGGGTTATTTTTTCAGTATTCTGTTATAGA CTCCTTCCTGTTATAGTAGAGTGTATGTTTATGAGTTTCAGTTTTGATGGTTATAGTATTATCATTTGATATTTGGTACCTTCTAGTGAGACAGATTATA AAGTAGTAATTATAGTGGATTATGGTTTCTGTGTTGGTTATAAATATATACATTGTTTGTTGTTGGAAAGTACACAAAGAATTTGGATTTAATGACTTCA GGTGATTTTGGTAACTTAAGGGAATCCTGGCTGCTGTTGGAAGACTTAACAGTTGGGATGAATAGATGAAGAATGAGTGTAATATCTATGCATTGTCAGT GTATAAAACTTATGCACAATTTATTTATATTACTTTTTTGAAGAACCAACAATGATAAAACATGAATAATACATAATCCAATAACAGTGTATAAAACTCA TGAG BLAST |
Tissue | flowers |
Gene name | LI_gene_59623; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_218155
Blastp | R3H domain-containing protein 2 from Mus with 34.84% of identity |
---|---|
Blastx | R3H domain-containing protein 2 from Mus with 34.84% of identity |
Eggnog | R3H domain containing 2(ENOG41106PI) |
Kegg | Link to kegg annotations (71750) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458719.1) |
Pfam | R3H domain (PF01424.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |