Ll_transcript_218272

• Id Trinity: FTRINITY_DN56380_c0_g2_i10
• Name Transcript: Ll_transcript_218272
• Sequence: TCCAAACAACTCATTTAAGAGAATATTTTTTCATGAAATAAAGTGGATAAAAAACTGAGATTATCCTCTTCCTCTGAAAAAAAACAACAACAACAAAATG GCGCTTCTGGTAAAGTTTATCATTTAAAGTTATCAATATTTTTTCGCGCCCGAGTTCTTTTTTCCTCATTCCACAAACCTAATTCTACATCATTCCAAAC TCACTTCCAATCAAAGATCGAAGATGTTGAAGACGAAAGCATTCATCGGTTCCAACGTCTTCATGTCACGAAACTTGGTTCCTCCTGAAATATTCGCCAC GCTCCACGACGCGCTCAACGATAACGGCGCTCAAATCCATCTCTGCTGTGATCCTTCTCGCAATGCCACCAACGATTATCACATCATTTCTTCCAATAAA CACGATAAATTTGAAGATCTTAAAGCCAAGGGATGCAAATTGATTGGTCCTAGATGTGTTCTGTCGTGTGCTAAAGAATGTAGGCCTCTACCTAAACAAG GCTTCACTTGTTGCCTTGCCATGGATGGTGTCAAACTACTTGCATCTGGCTTTGATATGGATGAGAAGGTTAAGATAGAAGAGTTAGTGACTGAAATGGG TGGAGTTCTACATGCTAAGGCATCACTGGATTTGAACTTCGTCATTGTGAAAAATGTTTTAGCTGCAAAATATAAGTGGGCTTTGAATACCCTGAAGAAA CCGATAGTGACTTATGAGTGGTTAAAGCAATGCTCAGATGAGCATCGCGTTGTTCCTCAAGAGTCATACAAGGTCCTTCCTTTCTCCGGGTTAACGATTT GTGTGACTGGAATTCCAGCAGATAAGCGCAGAGAGATGGAGAAACTTATTTTACAAAACGGTGGAAAATACTCTGCAGAACTGACAAAGAAGTGCACCCA TTTGATTTCTGATGCTCCTGAAGGTGACAAATATAAAGTGGCAAAACGTTGGGGCCACATTCATATTGTGACAAGTAAATGGTTTGAACAATCTATTGCT CGAAGAGCATGTCTGAATGAGGAGTCCTACCCTGTACAGAATGGATTTTTATCTTCACATAAAGTAACTAGGGACTCAACAGTGCAACATAGCCAAGAAA AAGAAATTAGTAAATTGCAATCTGTGGCATCAGCAGCAGCTGCAGATTCAAATGTGACAGTTTTTTCTCGTGCCGACTTTGTGGATAGAGATCTAGAAGT TACACAGTCAGAATGCATTTCTCCTTCAAATGTTCCTGTATTTGTTAAAGAGGCAGATGCTGACGCACCGCCGGAGAAGTCCAGCAATGAATTGGACTTT GATGGTGTTGTTGCCAATGATTCTGAATCTGATGATAATGATCTGTACTTATCAGAATGCAGAATAATACTTGTTGGCTTTGAAACATCTGAAATGCGGA GACTAGTTAATATGGTGCGTAAAGGTGGAGGCTCCCGATCTATGTCTTTCAATGACAAGTTGACACATATAGTAATTGGCTGCCCTTCAGAAATGGAGAA TAAGGATATAAGGCGTCTCGCTTCTTTAGGTGTCATTTATGTTGTTACGACATCTTGGCTTGAAGACTGTCACCGTCAAAAGAAAGAAGTCCCTGTTCTT AGGAGACACATTGCATCCGATCTATTTCTTCCTAAAGCAAACTCAGTAAAAGGAGGAGCAGCGAAAAGCATGATGTCCACTGATCAAGGTAAAAGCTCTG GCTTTCATCAAAGCTTGCAGACTGACCACATGGTGGGCATTATGGATTCCGGAGTTGTAATGCCGGTATCTTTGGAGAAAAGCAAAGAGAAGCCAGATAT GGGTATAAATGTTCAGACAGAGAGTAAAGCATTGGGCAGATCTATGTCAAAAAAGGAACTTCATGTCGATAAATTTAAGGTTCCAAAGAGGATGAAACAC GACTCTGGTGTTAAAAAAGTGAAGTCAGCAACTGTTTTCAGAGGGAAAATATTTTGCTTCTCAAATTTATTTCCTGAAGAAAGGAGAGCTGAGATTGTCC AATGGATAAGTCAAGGGAGTGGAGAGGTAATAAGCGAGCAAGCAAATCAGAATGTGCACTATACTATTGAGTGTCATGGTGTTACACCAAAGTTGATTGG CAATTCACAACGTACATGTATTTCCAGTCATTGGATACGATCTTGCTTGGAGGCTGGATCCTTGCTGGATGTTGAGGGTCACATTCTTTATTCCCCACTT CCTTGCCGTGTTCCATTACCTGGGTTTGAAAGCTTCCGATTTTGTGTTTCACAATATGATGAGAAAGACAGAATCCTACTTAGAAACTTGTGTTTCGTTC TGGGAGCTAAATTTGTGGAGAAGTTGACTAAGAAGGTCACCCATTTGTTGTGTAGATTCACCAATGGTCCTAAGTATGAGGCTGCTTGTAAGTGGGGGGT CCGATCAGTTACATCCGAATGGATATTGGAATGTGTCAAAAAGAATGAAGTTGTTTCAGTTGATCAATTTTTACCAAAAGAAGTCACTGATCAAGACCAA GAGGCAGGAGCTTGCATTACGAGTCAATTTCCTACTCAGGCTGCTCGAATGATAAGTGACATGCCATCCCAGTTTCCAAGTCAATCACAAGATTTGAGAA ACATCCCAAATATATACTTAAGTAGTGAAGTAGACAATCATCGCACTGATTCTAAAATATCAAGTATTTACCACAAAAAAGCAAGGCTTATGGAAGAGCA TGACCTATATGATAAAGTGCCTTTTGCAGTGGATTCAAGTATTCATGTGAATAATATGAGTTTGTCTGAAGACAGTGTACATAAATATGTTGGGGAGGTT TCACATGCTGTTCCTGATGTTGCTGATGCAATTGAGGACTTGTTAGAGCAGACAAGTAAGATCCATGATCAGGGATCCCCAGTGCAGGCAGTGTGGGAGA GAAGTATTTACTTGTCTGATTGTTCAGCCGTTGCTGAAGACAATTCAAATCTTCATACTGTCGTTGGGTTATCTAAAAACTGGTTAAACAGTGCCAGACA GGATGATAATGGCGAGGCTTCTCGAGATCGAAGAACGGGAATGTACGATGGTTTTACTGAAACACAAACAGAATCTCAGGTTGTCAGTTATGAAGAAGAT TTGTCGGGACGGCAAATGCTTATAGAAAGAGTCCGAACTCGAAGTAGCTTGCAATGAAATATGATGACCCCCTTGAAGGAAGATTTCAGTAGAGCATTAT TCTCATTTCATGATCTGATGGTAGATCTGAGCTACAAGCTAATGCTCAAGAATCCTTTGTCCTTCGCCATTAGCATTTGATAAAAGTAACTCAATCTTGG CCCTATAATGGAGGAGACATAAACATCAGGTTGGTATAGAATGGTAATATCTATTATATTTGTTGTATCTACTGAACACGTCACATATTTTGCTTTTGAG ATGCAGCACCCCTTTGTCCCTTGGAATTAGGCTGGAAAAGTATAAAGAAAATTGAGTGGTGTTCTAATCAAATCTTTGTACACTGTATCTAACAAAAATT GAGAGATTCAATTAGGCAAAGTAAAAATAAGAGGAAAAAACGTATGGTCTGACAACATAAAAGTTTTATACACTATTGATAC
• Tissue: flowers
• Gene name: LI_gene_59653;
• Additional information: details;

Expression of Ll_transcript_218272

FPKM

• FPAB: 0.8
• FPNAB: 0.3
• LF1: 0.2
• LF2: 0
• LF3: 0.1
• LF4: 0.3
• UF1: 0.1
• UF2: 0.2
• UF3: 0.1
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_218272

• Blastp: DNA topoisomerase 2-binding protein 1-A from Xenopus with 25% of identity
• Blastx: DNA topoisomerase 2-binding protein 1-A from Xenopus with 25.03% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (398573)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456412.1)
• Pfam: BRCA1 C Terminus (BRCT) domain (PF00533.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;