| Id Trinity | FTRINITY_DN56380_c0_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_218268 |
| Sequence | CCAAGACTTATCCTATTAACTTATTAAGTGAGGCTGGCTGCATCGATCAGCGGATGTCAATAGACTCTATCAAAGTCAAAATTCCAATAAAACCAAGCTC CCAAATCATTGGTGGTCAGTGATGGCTAATATGGCTCTTAATAGTAATAGAGCTCACATGCTTTGTTTTGTGGCCTATCCAATTGAGTTGAGTTTGGCTA CATTTGAGCACTGCATTTAGATGGCCACATCGTTATCGGAGTATACAGATATAGAAAGACATCTGCTTTTTCCAAATGTCTTCAAGCTGGCAGTTCTGCC AGTGTAATAATTCAGCATACCAGTTCCACTCTCTTGTCCAATCTTTGTTGTGGTTTTAGCTTACATTGATGCTGTACAATCTAATATGGATGACTTTATG TCTGGCAGTGGGCTTTGAATACCCTGAAGAAACCGATAGTGACTTATGAGTGGTTAAAGCAATGCTCAGATGAGCATCGCGTTGTTCCTCAAGAGTCATA CAAGGTCCTTCCTTTCTCCGGGTTAACGATTTGTGTGACTGGAATTCCAGCAGATAAGCGCAGAGAGATGGAGAAACTTATTTTACAAAACGGTGGAAAA TACTCTGCAGAACTGACAAAGAAGTGCACCCATTTGATTTCTGATATATCCTTCCAATAGCTCTCTTAAATGATTGTGATTCTTTTAGACATTTATATAC ATCCTCCTTGCTTTTTAACAAAACTAACCATTTTGGTTTTATTTCCTTCGGGATTAGAGGCCCCATTTTGCATGCAATTTGTGTAAATGTTTTGAAGGTT TATTCTTTTCATTTGCTGTGCGCCTGGCATGTGATCCTCTATGACCAAATAATTCAGTACGTGAACTCAACTCTTTTATTGTGGTCTAAGGATTGAATAT TTGTTTCCTTTACTGTCCTTAAGCTCCTGAAGGTGACAAATATAAAGTGGCAAAACGTTGGGGCCACATTCATATTGTGACAAGTAAATGGTTTGAACAA TCTATTGCTCGAAGAGCATGTCTGAATGAGGAGTCCTACCCTGTACAGAATGGATTTTTATCTTCACATAAAGTAACTAGGGACTCAACAGTGCAACATA GCCAAGAAAAAGAAATTAGTAAATTGCAATCTGTGGCATCAGCAGCAGCTGCAGATTCAAATGTGACAGTTTTTTCTCGTGCCGACTTTGTGGATAGAGA TCTAGAAGTTACACAGTCAGAATGCATTTCTCCTTCAAATGTTCCTGTATTTGTTAAAGAGGCAGATGCTGACGCACCGCCGGAGAAGTCCAGCAATGAA TTGGACTTTGATGGTGTTGTTGCCAATGATTCTGAATCTGATGATAATGATCTGTACTTATCAGAATGCAGAATAATACTTGTTGGCTTTGAAACATCTG AAATGCGGAGACTAGTTAATATGGTGCGTAAAGGTGGAGGCTCCCGATCTATGTCTTTCAATGACAAGTTGACACATATAGTAATTGGCTGCCCTTCAGA AATGGAGAATAAGGATATAAGGCGTCTCGCTTCTTTAGGTGTCATTTATGTTGTTACGACATCTTGGCTTGAAGACTGTCACCGTCAAAAGAAAGAAGTC CCTGTTCTTAGGAGACACATTGCATCCGATCTATTTCTTCCTAAAGCAAACTCAGTAAAAGGAGGAGCAGCGAAAAGCATGATGTCCACTGATCAAGGTA AAAGCTCTGGCTTTCATCAAAGCTTGCAGACTGACCACATGGTGGGCATTATGGATTCCGGAGTTGTAATGCCGGTATCTTTGGAGAAAAGCAAAGAGAA GCCAGATATGGGTATAAATGTTCAGACAGAGAGTAAAGCATTGGGCAGATCTATGTCAAAAAAGGAACTTCATGTCGATAAATTTAAGGTTCCAAAGAGG ATGAAACACGACTCTGGTGTTAAAAAAGTGAAGTCAGCAACTGTTTTCAGAGGGAAAATATTTTGCTTCTCAAATTTATTTCCTGAAGAAAGGAGAGCTG AGATTGTCCAATGGATAAGTCAAGGGAGTGGAGAGGTAATAAGCGAGCAAGCAAATCAGAATGTGCACTATACTATTGAGTGTCATGGTGTTACACCAAA GTTGATTGGCAATTCACAACGTACATGTATTTCCAGTCATTGGATACGATCTTGCTTGGAGGCTGGATCCTTGCTGGATGTTGAGGGTCACATTCTTTAT TCCCCACTTCCTTGCCGTGTTCCATTACCTGGGTTTGAAAGCTTCCGATTTTGTGTTTCACAATATGATGAGAAAGACAGAATCCTACTTAGAAACTTGT GTTTCGTTCTGGGAGCTAAATTTGTGGAGAAGTTGACTAAGAAGGTCACCCATTTGTTGTGTAGATTCACCAATGGTCCTAAGTATGAGGCTGCTTGTAA GTGGGGGGTCCGATCAGTTACATCCGAATGGATATTGGAATGTGTCAAAAAGAATGAAGTTGTTTCAGTTGATCAATTTTTACCAAAAGAAGTCACTGAT CAAGACCAAGAGGCAGGAGCTTGCATTACGAGTCAATTTCCTACTCAGGCTGCTCGAATGATAAGTGACATGCCATCCCAGTTTCCAAGTCAATCACAAG ATTTGAGAAACATCCCAAATATATACTTAAGTAGTGAAGTAGACAATCATCGCACTGATTCTAAAATATCAAGTATTTACCACAAAAAAGCAAGGCTTAT GGAAGAGCATGACCTATATGATAAAGTGCCTTTTGCAGTGGATTCAAGTATTCATGTGAATAATATGAGTTTGTCTGAAGACAGTGTACATAAATATGTT GGGGAGGTTTCACATGCTGTTCCTGATGTTGCTGATGCAATTGAGGACTTGTTAGAGCAGACAAGTAAGATCCATGATCAGGGATCCCCAGTGCAGGCAG TGTGGGAGAGAAGTATTTACTTGTCTGATTGTTCAGCCGTTGCTGAAGACAATTCAAATCTTCATACTGTCGTTGGGTTATCTAAAAACTGGTTAAACAG TGCCAGACAGGATGATAATGGCGAGGCTTCTCGAGATCGAAGAACGGGAATGTACGATGGTTTTACTGAAACACAAACAGAATCTCAGGTTGTCAGTTAT GAAGAAGATTTGTCGGGACGGCAAATGCTTATAGAAAGAGTCCGAACTCGAAGTAGCTTGCAATGAAATATGATGACCCCCTTGAAGGAAGATTTCAGTA GAGCATTATTCTCATTTCATGATCTGATGGTAGATCTGAGCTACAAGCTAATGCTCAAGAATCCTTTGTCCTTCGCCATTAGCATTTGATAAAAGTAACT CAATCTTGGCCCTATAATGGAGGAGACATAAACATCAGAGTCACTCTTCTAGACCATTAACATTTTGGTAGCTTTTAGTAGTTGCTGCTTTCATTGACAT AGAGGGTGTTAAGAATCAATTTATCTCAAGGATTTGTTCTTCAATGTGGCAGCTCAAGAATGGTACAGTTTTGTAACATGGCAAAGGTCGAACTTGGATG CATTGTTGAAATCTATTTCTTTCAAATGCTTTGGTGTGTTTAGGTGGGAGCAGAGGAATAGTTTGTCATACACATGATATTAATATTAGTTAGATTCTGA ATGTAGTAATTTGTTTAGCTTTGATATAGAAGTTAAATGCAAAGAATGTTGCCTACACCATGTAATTTGTGCATGGGATAATACCCACTTAGGTTTTGGA TAAAGATCCTGGAGAGTGAAAACAAATTTAAATTTCTACCAAAGGTAATTGCAACACATAAGGTCAAGAATTGCCTAGGGTTAGAAACGCTATTAATTTT AGTTGTAACTTTTAAGAAGCAACTTCACACCTTTTTATTTGGTTCAAAAGTAATTCTGAAAATCCTTATTGCAACATTCAAGCATTGCTTTAAAATTCTA ACAACTTATAAAAGTTCTTGTTAAATATATCATTGTATTTGTAAGCATAAAACTCATTCTTGTATAGAATTATTTTAAAGTTAGGTTCATTCATTGTATA GGTAAAAAATTAACACTGTCATGAGTATTTACCATTTGAGACTCCCAATTAAATAAAATAGTAAGGCATAATCCTAGGCTGCTGGAGGGAGGTTAACTAG CTCAGGTAGGCCTCATTTGTCAACTTTTAATATTTGTTCTATAAATGCAGATTGATGGTGGTGGTATATTGCGCTTGCTTTTGCAACATGCATCCTCCAA TAGTCCTAACTGTGGGAGAACCCTTCTACACCATGCCATCCTCTGTGGCAATGTCGAGGCTGTCAGGACACTTTTAGAATTTGGTGCTGATCCAGAATCC CCAGTCAAAACAACCAGCAAGACCGAGTTCCTTCCTATACACATGGCATCTCGTCTTGGCTTACCATTAATTATTCAATGCCTTATTGATTTTGGTTGTG AGTTGAACTCTATAACAAACTCCGGTGACACTTCTGTGATGATCTGTGCAAAATATAAACAAGAGGAGTGCCTCAAAGTACTAGCAAAGGCTGGTGCTTA TTTTGGTTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_59653; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_218268
| Blastp | DNA topoisomerase 2-binding protein 1-A from Xenopus with 24.91% of identity |
|---|---|
| Blastx | DNA topoisomerase 2-binding protein 1-A from Xenopus with 24.28% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (398573) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456412.1) |
| Pfam | BRCT domain, a BRCA1 C-terminus domain (PF16589.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |