| Id Trinity | FTRINITY_DN56405_c1_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_202110 |
| Sequence | GGACTGCTCATAAATATAAAAAAACTTGGACAAAATTAAAATAAAATTTAGATGAATAATTTGCCAAATTATTTTTCTTCATATATAAAGCAGGTGCCCC AAATTGTAATTGTTTTTCTTGGCTCTAGCGATTCATCCTTAACCTATCTGGTTCCTTCTTTCGTGGTTGCTAATCAATCATAAATCCTCAATTGATTTAT CACCTTTTCTTTTCGATTACATCTAATTCATCCATCAGCATCGCTAGTGAGTTGCTGTAAACTACATAACTCCTTTTGGCTGTTAGCTATGGACAAGGGA CCACCACCTAGCCTCTTTGTTAATGATGGTTCGTTCTTGGAGAGGTTCAAGCGACTTCAACAAGAACAAGAGAAGGGGAAGAATGCCAAATTAGAGGAGT CTAAGCCTGTTAAAGTTGCGTCAGGGTCCTTGGCTTCTAATCCCTCCATCCGTAAGGCTAATGACACACCGAAAACCCCCCAGGCTGGTTCTGGTGGCAA ACTTGCTTTCAGTTTAAAACAAAAGTCAAAGCTAGTGCCACCCCCTGTTAATTTAGCTGATGACGATGAAGAAGAAACAGGTGCTGGGGATGCTTCAAAT GATGCGCCACCAAAACGTCAAAAATTGGGTCAGGCAGATGGCACTGAGCAATCATTGAGACAACTTGATGTTGGTAATTACTTCTCTCATAAACTTTCTA CAGATAGTAGGTTTGTTGTTGGTATTCTCAAATCCAGCTGAATGCTTGATTTTGGTAGGATTTATCAAGTAACATAATGACATGATAGTTTTATATTTTG AATGTGGTTTATTATGATAAGCCTATCCTTAATGGGTGTTATGAATCGTCTTATAAATTTTATGCCCCTTTCAAATGATTGTGGGTGTCATCTTTTTATG TCTTTAGTTGCAATTGTTTCCTCTTTTTTTTTTCATTGTTGATCTTGTGTCTATAGTCTACCTGTCACTTTTTGTGTTGCTTTTTTCCATCTCAGTTCAT GGAAATTATATTTTTCTTTCCCTTGAATGAGATTTTGATTCTTCTTTTATTTGCATCTTGAAAAGCTTCTAGTGAAAGCGTTCCTTCCACGAATTTATCC TTTTATGAATGTGTTTTTACCTGAGGATGGACTGAAGGTGGAGATAACTGTATATCAATCTAATAGAAATTAAAGGGGCCCTTCCACAAATTTATCTTTT TAGAATGATGCGTTTTCACTTGAGGATCGACTGAAGGAGGAGATAACTGTCTGGCAATCTAAAAGAAACTTGTCATTCATTTGACTTATCCTTTGTATCA TATAAATGAAGTAGAGGAAAAGTTAAATGGGTGTCAGCTTAGGTGCATATGTATATGTGAAGTATGTTCTGATCTCCACTTTAGGTATTTAGTTGAAGGA AGATCAAGTTTGCTGTCTTCTCACAAGTAGGCATGAAGTTGCTTTTCAAAATTTTTTGCTTTGTTTTTTTGTTTCTTGTAAAAAAACATTGTCCTATACG TTAAGTTCAGTTTCATAACTGAAGAGGAATTCTCTATTTCTCGGTATATTCCTTCTTTTCTCATTGGGGTGGCGTTCAGCAAAGAGTAGAAAACGTCTTG AATATCTGTGTCATGAATGCAGCTTATTCCACAAGTACCTATCAAGAGTGGTGTATTGGCACGCCTGCTACAAGAGTAATTTGCATTCCCTTGTTCATGC TCTTGGTATTAATCAGTTTTATAAGTGATATGCAGCACCTTCTTCTCCAAGTGATCCTACAGTGAAGAAAGTTGCTGACAAGCTAGCAAGTTTTGTGGCA AAAAATGGAAGGCAGTTTGAGGATGTTACACGTCAAAAAAATCCTGGGGATACACCTTTCAAATTTTTATTTGATGAAAAATGTGCTGATTACAAATATT ATGAATACCGGCTTGCTCAAGAGGAAAAGGCTCTTGCACAGTCCAAGGAACCACAGGCATATGGGATTGGTTTATCTGCAGGGGGTACAAGCATTTCATC TTCCAGACCATCAAATGGTCCTCAGAAATCATCTCATCAACATTCAACCTACCAAATTCCTGCTTCTGTTTTATATGAACGTACTGAAGAACCATGGTCT TCTGGATCTTCAGTTCAAGCATCATCAGCAGGAAGTACTAATGAACCCAGTGGATCATCTAATGCTGATTCTTTAGCACTAATGGAATTCTACATGAAGA GAGCTGCACAGGAAGAGAGGTCGAGGCGACCTAAGTATTCAAAAGATGAGATGCCCCCTCCAGCTTCTCTTCAAGCAGCTTCTGGGAAAAAAGGCCATCA CATGGGTGATTACATTCCCCTAGAAGAACTAGAGAAGTTCATGGCTACCTGTAATGATGCAGAAGCTCAGAAAGCTGCAAAGGAGGCTGCAGAGAGGGCT AAAATTCAGGCTGATAATGTTGGCCACAAGCTTTTATCAAAAATGGGTTGGAAAGAAGGTGAGGGTCTTGGAAGCTCCAGGAAGGGTATTGCAGATCCAA TTATGGCAGGTAGTGTTAAGAAAGATAACTTGGGGGTTGGTGCTGTCCAACCTGGAGAGGTGACTCCTGAAGATGACATATATGAGCAGTACAAAAAACG GATGATGCTTGGCTACCGTCACAGGCCCAATCCTCTGGTAACTATAAAACATTATTTTCTTAGTTCTCAAGATTGTTTTTAGAAGGAAAGAGAAGACTCG AGAGTCATATTGTAATTGTATTTTATAGCTTCCAAACCTTTACTTTCATTTCATTATCCTCGAAAAAACAACTCACAAACGGGCCCTAAGGGTCGGTATG TGAGTTGGTTTTTTAGAGGAAAGGAAAGAGAAGATAGAGAGTCATTTCACAAATGTATTTTATGGCTCCCAAGTATTATGTTTCTCTTCGTTTCATTCCA GACCCGGTTAGAGGTGGACCCTTACTATAACCAGTTTTTAACATTTCATATTGTAAATGTTTGTTTTTACAGAACAATCCTCGTAAGGCTTATTACTGAA CATCATGGAGGAGGCCTTCATGTTCGGTTTATCGTGGGAAGGCTATTTACCATAGATGAATGGGCGTAGTGATTATAAGATTTTGTGAACGTTTGTTTAA ATAGTTTGAACGTTTGTTTAATTAGTTTGTGTTTTTTGAACACAATATGTTTCTTTTTTTTGCTGGGGAGTGAGGGAATTGTGGGTAGTGTTTACTATGG TCACATTTTATCCAAGAAAGAATTATTTTTCTACTGTTATATCATTGGAGGTTGCTATCTATTGTACTTGTTATTTTGCAAAACCCAAGATTGCGGTCTG TTTCCATGTCTGGGGTATGAGGATGGTAGATGTTGTAAGTAGATAATCTGTTTTCGAGATTTGAGCCTGACTCCTTTAACACTAAACAACAACCTTATTG TTGTGTTGAGATTCATCCTCTTTCTTGTTCATTGGTTAGTTAAGAAATATGAAGGAATGGAGAAGAGTAAATAGTAGACCTAGGATATAGGTTATTTTGA TAGGCAATGGTTATCACTTATATTGTATAAAGGCACTATAAAATCTGAAGTATCAACCTATGTTGTCTATATTAATATAGTTTAAATTGCCAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_59882; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_202110
| Blastp | SURP and G-patch domain-containing protein 1-like protein from Arabidopsis with 80.5% of identity |
|---|---|
| Blastx | SURP and G-patch domain-containing protein 1-like protein from Arabidopsis with 68.17% of identity |
| Eggnog | RNA splicing(ENOG410ZSH4) |
| Kegg | Link to kegg annotations (AT3G52120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413451.1) |
| Pfam | G-patch domain (PF12656.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |