Id Trinity | FTRINITY_DN56406_c5_g2_i1 |
---|---|
Name Transcript | Ll_transcript_202500 |
Sequence | ACCAAATTGAAAAGTTCTACCAATAGCCTCTAGCCATACACAATATTCCTGACATAAGCTTTCTCTTTACAAAGGAGAAAGTAGAAAAAGAAACATATAT ATTCCATTTTAGCTTTTCACAGCCCTCCAAATATGCCTAAGGAATTTGTTCTATACTTTATCATATAGCTTCTCTATCACACTATAAGAGAAAGGCCACA AAACTCTCTCCACCAAACACTTCCAATTGTTTGGTTTTTCTTAGTAGCAATGGCTAGTTCTAAGAAGCTAGTTGATGTTGAAACAGATGATGAAAGTCCT CATAAATGGTGTGTTTCATTGGGAGAAGAGGTTTTCAAAAGATTCTTCAGCCAGGCTAGTCCAATAGTGGTTAAGGTTTTTGGCGATGGTTCACTTTTCA GTCCAATGTTGTTTGGGAAGTTCTTTGATCCTTCTGATGCTTTCCCTCTATGGGAGTTTGAGTCAGATATCTTTTTATCTCATCTTAGGAGCACTGGCCA AAGCACTGTGGATTGGTCTCAAACAGATGAAGGATATATGTTAAAGGCAGAAATACCAGGAAGTGGGAAAAATGACAACATTGAAGTCCATGTTGATAAT GGGAAAGTTGTGGAAATTAGTGGACAGTGGAAGCAGCAAAGGGACTCAAAAGCAAATGAATGGAAGTGTGGCCAATGGTGGGAATATGGATATGTAAGAA GGCTTGAAATGCCAGAAGATGCAGATTGGAAACACATAGAAGCACATATATATAGTGACATATTTTTAGAAATAAAAATACCAAAGTGTGATGTAGCTTA AAGAAATGCAGAATCATATCTTTTCTCCCACAAATTATGTCACTTCGTAATAAGTAGCATATGAAATGACACACTTTTTGGGATAACAGATATACACCCA ATAATAATGTGTAGAGTGCTAGAATGTGTTACAATCTACTAGCAACTTCTATGCAAGTTGATACTTGACTTTTAACAGACTTATAACTATTAGTATGCAT GGGTAGAATTTCTGAAAATGTAAAATATATATACAAAATTGGGGAATAAAAAAGAAATTATTGTGTAAATATTAGCGTTTTTTATTAATTGTTATCTGAT TGCTAGTGATTTGGTGGAAAAAACAAAGCAAAGGCCTATCTATATAGTAAAGTGAGAGAGATAAGGAATAAGCAATGGAGTATTATGTTTTTAAATATTA ATAGTTCCAAAATAATACTGTTAAGTTCAGGATTTGTTGGATTCATGATATAGGTCTCATCAGCCAG BLAST |
Tissue | flowers |
Gene name | LI_gene_59891; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_202500
Blastp | 21.7 kDa class VI heat shock protein from Arabidopsis with 56.42% of identity |
---|---|
Blastx | 21.7 kDa class VI heat shock protein from Arabidopsis with 55.03% of identity |
Eggnog | kDa class VI heat shock(ENOG410YHRU) |
Kegg | Link to kegg annotations (AT5G54660) |
CantataDB | Link to cantataDB annotations (CNT0000798) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019437133.1) |
Pfam | Hsp20/alpha crystallin family (PF00011.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |