| Id Trinity | FTRINITY_DN56410_c5_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_201267 |
| Sequence | CCGGTTTCGCATTTTGTATTATCCCCGCGTTAGTCCGGTTTTACCAATATATGAAATACTTCGTATTGTCTATTTTGGCCATAACTGGGATTTAATGTTG ACTGTTGTCTTTGATATAAATGTCGTTTCATTCTGTCGTGTTATAATATTCATGTCCGGGTTTTCCTTTGCAACCATAAAGGTAGACGTGTAAAATGACG CGGCCCTTGCCTGGGTTTTTATGTGAAATCGACAAGGTAGGTGTGACCAGGGGGGCTTGGTCCTTGCCTGAGTTTCTCATTTTAACTTCTAAGGTAGGAG TGACTAGGGGGACTTGGTCTTTGCCTGAGTTATTTTCTTTTAAGGTAGGAGTGACCATGGGGACGTGGTCCCCGCCTGAGTTTTTAACTGAAACAGACAA GGTCGGTGACCAGGGGGACTTGGTCATCGCCTGAGTTTTTTCCTTTTAAGGTAGGAGTGACCAGGGGGCGTGGTCCTCGCCTGGGTGTTTAACTGAAACC GACATGGTTGGGTGACCAGGGGGCGTGGTCCTTTCCTGAGTTTTTATCTGCACATAATCATGAAAAAATAATACCTCGTTAACATTAATATTGATCTGTT ACACAGCGGTCCGCCCGTGTTGGGAATCAGACTTACAAGAATTTAAGCAAAAAATTGTCATAAATTGTGAGCATTCCATGTTCGGTGAGTTCTTTTGGTG GCGCTTTGTGCAGGTCGACAAATAGTTGGCATGGAACATAGTTGCTAGTTAGATCAGTGGCGTCCTTTTTCAAAGTCGGCCAAAAGTAACCGACACTTAG TGTCTTCTTCGCCAAAGCAGACGCCCTTAAATGATGCCCACAACTTCCTTTGTGTATTTCTCGGAGGACATAATTGGTTTGGGCAGGATCCAGACACTTC AACAAGGGAGTGGAGAACCCTCGACGGTATAACACTCCTTCAACGATGGTGAACCAAGAACTGAAGCGGAGTAATTGTTGTCTAGCCTTTCTGTCTTCCG GCAACTCGCCCCTTTGGATGTATCTGATAATTGGACCCGTCCAATCAGTTATGACCGGCGCCTGGTGCACCTGCATGATTGTGGGGCAGGAAATGGTTCC ATGAACTATTGATCGGTTGTTTCCCGGGCTCTTTGTGCTAGCCAATTTGGAGAGGATCTCGGCCCGTGCATTCTGTTCCCGGGGGACATGTTGGACGGTT GCTTCCTTGAAACCGGCCAGAAGTTCCCTTACTCTGGCGAGATATTTTCCCAACAATGGGTCCTTCACCTGGTATGCACCGTTGATATGGGATACGGCCA GCTGAGAATCACTACAAATGGAAACTTGCTCCACGCCAATCTCCTTGGCCAATTTTAAACCGGCGATGCATGCCTCGTACTCTGCCTGGTTGTTGGATGT TTGAAAGGATAATGTTAAAGAGTATTCTATGGCGACACCCTGTCCATTATCCAATATTATCCTTTCCCCGATGCCTCTCGGGTTGGAGGACCCATCAACA TAGATCGTCCATGTGCCTCCAGGTTCTGTCCCAGTCGTAGTTAGCTCGACTACAAAATCAGATAGGACTTGTCCCTTGATTACCACACTAGGCTCATACA GAATGTCAAACTGGGAGAGTTCAATGGACCAGGAGATCATTCTTTCGGCCAACTCAGGCTTAGAGAGTATCTGTCGAATGGGTTGGTTTGTCCGGACAAT CACCGGATGAGACTAGAAGTACTGTCTTAAAGGTCTTGTAGTTACCAACAAGGCGTAAGCCACCTTTTCCAACTTTTGATACTTCAACTATGGGCCTTGG AGTGCTTTGCCAGTAAAATACACTGGATGTTGGCCCGACTCATCTTCTCAAATTAACAACGCGACAACCGCCTCCTCAGTCACTGTTAGGTACAAGAATA GTGTTTCCCCCGGCTGGGGCTTCGTTAGAACCAGAGGGGTTGCCAACTGTTGCTTGAACCGGTTAAACGCTTGTTCACACTCCTTCGTCCATTCGAATTT CCGACTTTTCTTAAGGAGCTGGAAAAGTAGAAGCGAGTGTTTGACTGATGCTGGAAGGAATCGGGATAGTGCTGTCAACCGCCCGTTTAGCTGCTGAACT TCTTTTACCGATCGGGGGCTGCGCATGTCCATAACCGCTTGACATTTGACCGGGTTGGCCTCTATACCTCTGCTGGTAATCAAGAAACCCAAGAATTTGT CGGCCTCAACCCCGAACGTGCACTTTTCTGGGTTAAGACACATATTGTATTGTCATAGTCGGCGGAAGATAGTTGTCAGATTTTCCACATGCTCTTCCCC CGAGAAACTTTTGGCGACCATGTCATCCATATAAACCTCCATAATTTTGCCGATATCGTTCTTGAAGACCAGATTCTTCATCCTCTGGTAAGTGGCCCCG ACATTTTTTAACCCGAACGGCATGACGGTGTAACAGTAAGCAGTGTGTGGTGTGATGAATGAAGTTTTTTTCATGATCAGGGGGTTACATCGGAATTTGG TTGTAACCGGAGTAGGCGTCCATGAAAGATAGGTATTCATAGTCGGAGGAGTTGTCAACCAACGAATCAATATCTAGAAGGGGGTACGGGTCCTTAGGGC ATACCTTGTTCAAGTCCTTGTAGTCCACACACATCCTCAACTTTCCTGAAGGCTTTTTGACCAGGACTACGTTAGAAAGCCACGTAGTATAGGATATCTC TCGTATGAATCCAGCTTGTAACAGTTCTGCCACCTTCTTCGTTACCTCGTTTGCTCTATCCCCGCCCATTTTCCTTTTGCGTTGGGCCACAGGTTTTGCC CCAACCTTTGTAGTCAAGCGGTGTGAAATGATGGTTGAGTCAATTCTCGGCATATCCGCGACTGACCATGCAAATAGGTCACTGTTATCTTGAAGACATT TGACGAGCCTGACCTTCTGCCCTTATGGTAAATTGGAGCCAATGTGTACCACATTATCGTTAATTGGGCCGACTTGGAGAAGGATTGTTTCTCCAGCAGG CTGTGGCCGAAAATGTGTATCATCTGCCCGGGCGTCCAACTCTACCAAATGCACCGCCCTGTGCCTCTTCCTTGAGGGGTGGCTTGAAGAATCGGGCTGT GTGGACGGAGGCTCAACTGATAGTAGCTTCTGGCACTGTGTTGATCCCCCCGCACCTGGCATACCCTCAAGTCTGGTGAGAGGAATTTCATGTAGAGGTG GGGGGTAGAGACTATCGCCTCCAGTCTGTTCAAAGTTGGGCGTCCCAGAATGCTGTTGTATGCTGACGCGCAATCAATAACCAAGAATTTGGCTTGGATT GTGCAGGACAAGGGTCGGCCCCCCACCGTCAGCCAAATATAAACGTATCCCCTTGGCGTTATTCCTTGTCCGGTGAAACCCACCAACTGACCATCATACG GCAAAAGGTCCTGGTCACGGAGTTCCATCTTGTTGAAAAGGTCTGTGAACATAATGTCCGCCGAACTCCCCTGATCGACGAAAAGGCGCCCTACCTTTTT ATTGTTCATTTTTGTCGTGATGACTAGAGGGTCGTCATGTTCCCTTATGACGCCGTGAAAGTCCCGATCGTCAAAACTGATTGCCGGGGTGGACTATGTG TGCTGTCTGATGCCTGAATTGTGGAGGTTTGCTTGCATGACCTCTCTTACATACCGTTTATGGGCGGCCCGGGATGTACCTCCTGTTGTGAAGCCGCCTG ATATGGTATTGATATCAACTAGGTTGCAACCCCGGTAACTTTCATGCCGCCTTCTGTCCTGAGGACGCTCCCTTTGATTTCCTGGGGGGGATCGTCTTCG CGGAGGGTTTTTCCGACGAGGGGGAGATCGGGTTGTCCGGTTTTGGCCGGCGATGTAGTGCTTGAGGTGGCCCGCCCGAATCAAATCCTCTATCGTGTCC CGGAGTTGGGCGCATTCTTCTGTGACGTGCCCAAATACGCTGTGGAACTCGTAGTATTTGGACCTGTCTTGACCTGCCACTTTTCTGTTAGGATTTGGTT GGGGTAGTTGCACCAGGTGGGTGGCCATGACCTCCTGGAGAATTCTCGTTCTGCTAGCGTTAAGAGGTGTATACGCCATGTACTTAGGTTTTTTGAATCT TTGCTCCTCACGATGTGAATCATGGTATTTGGACTTTTTGTCCCGTGAGGGGGGTGATGATCTTGACGGTCCACCGGCGAGCGGTGTGGCCTGGTTTCTT CGATGTTGATGAATTGTTGTGCGATGACCCTGACTTCTTCCATAGTTAAGTCAGAGAATTTGGCCAATTCCTGATGGAAAGCTCCATCGTTTAGTCCGGA TACCAAAATATGGACGACGACTGCTGGCACCAGGTTTCGACTCTCATTGCTTATATGTTGAACCGGTCCAGATATGCTCGGAGCGATTCATTGGGACTCT TCCTCACAGCGGAGAGGGTGTAAGAAGAGGGGGGCTGCTCCCTACTGGATGTGAATCGGAGGTTGAATCCGTTGGCCAGTGCATCCCATTGACCAATGCC ATTGGCTGGTAGGCGAGTAAACCATTGCAAGGCCGCCTTTTTTAGTGTGAGGGGGAAAGCACGCCACATGATGGCATCGGACGCCCCATGAAAAAGCATG GATGCTTCGAATGCATCGAGGTGGTCCTGGGTCGGTTGTGCAATCGTATTGGTCGATGTTGCTAGGGCGGGTTGCATGCTTAGGGAGCGGTGTGTTCATT ATGTCCTGGGTAAAGGGGTGGCGGGCTCGAGAGGAACCTTCCACGGGTCGGCGAGAGGTTTGGTGGGTATAAGTTCGGGCGTGGGTTGTAGTGATTGTGA TGGGTCGTTGTTGGTTCTGGGAGTGGTGGTCGGATTCAGCACTTGGCTCGGGTTGGGGTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_59940; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_201267
| Blastp | Ribonuclease HI from Halobacterium with 33.33% of identity |
|---|---|
| Blastx | Transposon Ty3-G Gag-Pol polyprotein from Saccharomyces with 28.28% of identity |
| Eggnog | ribonuclease H activity(COG0328) |
| Kegg | Link to kegg annotations (VNG_0255C) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432977.1) |
| Pfam | RNase H (PF00075.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |