| Id Trinity | FTRINITY_DN56411_c1_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_200520 |
| Sequence | TTTATAACTTTTATATATTATTACTTTATTAGAATATGTAAATGAAAAAAAGAAAAGAAAAGAAGAAAACAAAATATTCATTTCAATGTGATAATTGAAT CAACCCTCTCAATAATATATCATCACTCAGATCAGATCCAACACCCTTTTCCTCTGATCATTGTTGGAAAAATTTTAAGCAATGTTGCAGAGGAGATTCT CGTTATTTGGAGGTAGAGATTCTTCTTCTTCTTCATCAAATTTGGTTGGTAACAATTTATCATCAAAGGGTATTGAAGAAGAAGTAGTAGTTCCAATTTT GAAACTTGAAACTGATAGAGAAGTTTATAGACCCGGTGATCCAGTTATTGTGACCATTCATATCTCAAATCCATCAAATGGGTATTCATTTTTGGTTCAA AGACTCAGTTTTGAGATCAAAGGGATTGAGAAATTGGATACTCAGTGGTTTGCTACACAGAAACCTTTGCCTGGTTCTAAACAAAGGAGAGGTGAACATG TATTTTTAGAGTGCTCAACACCAATCATGATTGCGAATCAGATCGTTAATGCTGGCAGCAGCAAATCATATGTGGTGCGAACTCTACTGCCTAACATCAT TCCACCATCTTACAAGGGTTCAAACATTCGCTATTTGTATTACGTTAAAAGTGCATTAACAGGAGGGTGGCTAATTATGGAAAACGGGCAATCTCGTCTG GAGAACATAAAGAATATAAATGATTTGGAAGTTCGTATTCCATTACAAATATGGGTAAACCAGAAAAGCACTGGCATTCTAATGGATGAAGATATTGTTC CCCCAACTACTGTCCAACTCGATATATTTTGGAAAGAGATGAATGGAGATGCCGATTGGGTTCGAGCAAATGATATGTACGATGGTGTTGATGAGGAATA TGACAGCTCAAGAGATGATGCCTCCTCTGTTTCCTCATATAACTTGAAAGAAAATCTACACATAGGCTTTGGAAGTTCACTATCATTGCGATCTTCTGCA AGATCATTGAACAGAGATAGTTCTGCTTTTGAAGGTCAACGAACAAGTTTATCATCAAATATGGCACTTCCCCGATTATCAGTTGCTGAAGTGTTATCTG ATTCAGGTCCTGATGCCTTATCAACCCAGAAGTCATTTGGCATTGTCTCCCCAAGTGAGCAACAGAAGTTCAGAAAGCCATATTCGCCAGTTGATGCAGG AGTATCGTCTTCTCCCGACGCAGGACCCGTTGAATCTTTAGCATCAGAAGGCTTCATTAGAGGAAGGTCTTATAACATCAGACTTGATGATCAAGTTTTG CTTAAATTTTCCCCGAAAAATTCGGATTCAACATATTACTTCAGTGATATGATCGGTGGGACTCTTACTTTCTTTCACGATGACGGAGCTAGGAGATGCC TTGAGATCTCAGTAACATTGGAAACTTCGGAAACTATAAATCGGCGATTTGTTCACCCTTCTAGGAGGAATTCCCCTACAATCACCAAGGTTCAGAGTGA TCATCACGAGGTTGTTGCAGATTTGGTGCAGACAAGCTTCCTTTTTTCTGTCCCCATGGATGGTCCAATGTCCTTCTCCACTGCACATGTATCTGTACAA TGGGTTCTCCGGTTTGAATTTTTCAACACTCCAAAGCATGTGGATTGGAGAAAATATGAGCATCCTCTTCTGATTGAGGGAAGGGACAAAACCGAATGGG TTCTTCCAATTACTGTGCATGCCCTGCCACCAAGAACTCCTGCTTCTGGCACAAGAAATGAGAAGCTCTTCTCTCTGGATCCTATGTGGGTGCACAATTG AAGGTTAGAGCAGATGATATGTATGATGGTGTTGATGAGGGATATGACAGCTCAAGAGATGATATCTCCTCTGTTTCTTCATATAATCACTTGAAAGGAA ACCTACTCAGAGGCTTTGGAAGTTCACCATCATTGCGATCTTCTTCCACAAGATCATTGAACAGGGATACTTCTGCTTTAGAAGGTCGTCGAACAAGTTT ATCTTCAAATATGGCGCTTCCCCGACTATCAGCTGCTGAGGTGTTATCTGATTCCGGTCCCGATATCTTATCAACCCAGAAGTCATTTGGCATTGTCTCC CCAAGTGAGCAACAGAAGCTCAGAAAACCGTTTTCTCCAGATGGTGCAGGAGGATCGTCTTCGCCAGAAGCTGGAGCCATTGAATCTTTAGCATCAGAAG GCTTCATTAGAGGAAGGTCTTATAACATCAGACTTGACGATCAAGTTTTGCTTAAATATTCCCCTAGAAATTCTGACTCAACTTATTACTTCAGTGATAT GATAGGAGGGACTCTTACATTTTTTCACGAAGAAGGAGCTAGGAGATGCCTTGAGATCTCAATAACATTGGAAACTTCGGAAACTATAAATCGGCGATTT GTCCACCCTTCTCGGAGGAATTCACCTACAATCACCAAGGTATATGGACTGTTCTTATAGCTCTCACTGTCACTGGTCAAGCTTCTTTTTCATTTTTGCT AAATGCTTGTATAAAAAACCGAAGTGTCATTTAATCCATTTAGATTAAGGTCTTTGTTAATGGCTCTCCTGAAGTTTTGTTTGGCGATCCTCAGCTCCTC TACCTCTTTTAATCAGACTATCTATCATTTTATTCACCTTTTCTCACTAGACTCCCCCTCTATTGTTCTACACCTCACATTATCCAACCTCCTTAGGTGA GTTTCTATCATTTTCTCTCAGTAGATGGTACTCCAACTTTCTATCAAGTGCATCATTCATCATTCATAATAATTTAGATCCTTATAGGTGTATTACATAT TAATTTGTCTCAAGATTCTCATTCACTAAAGTTATTTGTTTTTGCTAGTATTGGTACTTTACTTCCAATATTCATTACCATAGCTAAATGCAATGCTTCA AATAGTGGTTCAAAGCTATATGCACCATTTGCTATAGGCCTAAATGCCGATTGTCACTATGAGTGTGTTATTTGGTGTTAATTTGGTTTGGTTTGTTGGT GCCTTTTGATCGGACAAAATGCCAGGATTATTTAATTGTCCATTTAGTGTCTTTATCCAAGAAAAGGGCATGAATATTCGAAGGCCAATCTCTTGTTGAC TTTGAAAGAGTTATTCATTTATTTTCTGTCCGTATCATGTCATGTCCCGTGTCATTTTTGTCTCTGTATGTCCTTCCTTTTTTATGCAATATTCAAGAGT AAAAGCAATTGGGTCATGATTTAACTAATGAAAATCTGTTAACATGTCTATATTATTATAATGTGGTATGAGCTTCTGATTCTGACAGTTATGCTCTCAA TTTGCTTTTAGGTTCTGAGTGACCATCACGAGGTTGTTGCAGATTTGGTGCAGACAAGCTTTCTATTTTCTATCCCCATGGATGGCCCAATGTCCTTCTC CACTGCACATGTATCCGTGCAATGGGTTCTCCGCTTCGAATTTTTCACCACTCCGAAGCATGTGGATTGGAAAAAATATGAGCATCCTCTTCTGATTGAG GGAAGGGACAAAACCGAATGGGTTCTTCCAATTACTGTGCATGCCCTGCCACCAAGAACTCCTGCTTCTGGCACAAGAAATGAGAAGCTCTTCTCTCTGG ATCCTATGTGGGTGCACAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_59948; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_200520
| Blastp | RAB6A-GEF complex partner protein 2 from Homo with 29.05% of identity |
|---|---|
| Blastx | RAB6A-GEF complex partner protein 2 from Homo with 29.05% of identity |
| Eggnog | RGP1 retrograde golgi transport homolog (S. cerevisiae)(ENOG410YESN) |
| Kegg | Link to kegg annotations (9827) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019465438.1) |
| Pfam | Rgp1 (PF08737.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |