| Id Trinity | FTRINITY_DN56421_c0_g3_i11 |
|---|---|
| Name Transcript | Ll_transcript_201519 |
| Sequence | ACATGGTCCTGGCCATGAATGGCTTATGGCTGGAGCAAGATCGCTCCGAATAGCATCTTTTCTATTGCAAATTATTATGCTTAGCAATGCTATTATGGCT GATTACTATGGGCCTTTTGCTGCTCTACATTCTTTGTTATGGGAAGGAGCTGAAATCAAGCAATTTCATGAGCATATATTGGGAGTGGAGCAGAATTTGA ACACAACTCCTGCGCTATTGCTGTCCTCATCCGTTTCTCCATAGACCTCATCAGTGCTCACTTGACTGAACTTCCTGATCTGGCCAGTTACCTTGCGGGC TTCTAATAGGACAGGAGTACCATATATGATGTTCTTCGTGAACTCGAAACTATTACCAAAAGAGTTGTCAACATGGGTTTGAGCAGCAAAGTGCATTATA TTGTCGATCGACTCCGTGATGAGAAGGTAGTTGACAAGATCAGCACTACCAATATCACCCTTCACAAACTTGAAGTTGGGAGATGATTTTGAAGGAATGA GATTCTTTATTAGAACAGTAATCAAGTTCGTCAAGGACAACAATTTTGTAGTCAGGGTAGCTCCGAACAAGCTTGTTCGCAACATGAGATGCAATAAATC CACCTGCCCCGGTAATGAGGATATTCTTTGGGGTATATGAACCCATATCTGGAACCTTCTAATTATGGATGCAGATCCAGAGAGAATAAGAGCGAGAATT TTGGAACAAGAAATTGAAAAATGTGAAGGTGGTAGATTATGGAGTGATCAATCATCTTCTATGTGTGTTATTCTTGTGAAGAGTGAAATGCAGATAATAT ATATATTATAATGATGATTATGTTTTTAGGATAGTGTTAACTATCTTGACTAAGGATACATTTTGAAAATTCTGTAATATAAGTGAATAATTGAAAATTG AATCCAAAGAGGGTTTCAAGGTTATCTTTACTTATTTATCAAAAAGATGATGGCTGCATTGATTTATATATATAATGCAATTAGTAAGGGGCTGAGGTAA GTAATAACACATTTGAAATTTTAATATAATAAAGTCCTAATCCCAGTAGCTGCATTCTCCCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_60022; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_201519
| Blastp | Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3 from Arabidopsis with 87.63% of identity |
|---|---|
| Blastx | Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 from Arabidopsis with 85.57% of identity |
| Eggnog | dTDP-glucose 4-6-dehydratase(COG1088) |
| Kegg | Link to kegg annotations (AT3G14790) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_013464513.1) |
| Pfam | NAD dependent epimerase/dehydratase family (PF01370.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |