| Id Trinity | FTRINITY_DN56427_c3_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_202470 |
| Sequence | GAAAGTTCTGCCTTGATTGCTCAAACCAAGGGTAAGAAGGTTGGTCAATGGCAGTTCTCTCAACTTGGTCATGGAGCAAGAGGGATGGAGAAACTTAATG GGGAAAATAAAGCTTCATTATGGTGCACCCACTGTAAGAAGCCTCGACACACACAGGAAAATTGTTGGAGACTTCATGGTAAACCTCCTAATCCAAATCG AAATTGGGCAGCTTTGGGAAATCAAAGATGAGGGCAAGCACAAGCCCATATGGCACAAGTAGGTTCTATAGAGGGCAGCCCCTCACCCTCCATTGAATTT AACACAGAGGAAATAAAAAAACTAAGGGATTTCTTGTGTACACTAACAGGACCCACCGAACCAGGATCAGGGATCGGGGAAGATGATTAGACTTGCTAGA GAGGACAATGGACTCTACTTCCTAGAAGAAACTAACAGGATGTGCAACACTAAGAGTTCAACTCCTATGTCTATGCTATCAGAATTATCTCTATCCAATA AAGAAAAAATATGGTTGTATCACCTTCGTTTTGGTCACCCTTCATTTAGTACCCTAAAGATCATGTTCCCTAGCTTATTTCAAAAACTTGATATTGGATT GTTCCATTGTGATACTTGTGAATTTGCAAAACACAAACGTGCCAACTTTCCCATTAATAATACAAGAATGACAGTTCCTTTTGCCTTAATACACAGTGAT GTGTGGGGACCTTCTAATATTCCAAACATATCTGGGGCAAGATGGTTTGTCATATTTATTGATGATTGTACTCGAGTATCATGGGTGTTTCTCTTGAAAA ATAAAAGTGAGGTTAGCCAAGTCTTTAAACATTTTGTCCAAATGATAAAAACTCAGTTTGAGACAAACATTAAAAGAGTTCGTTCAGATAATGCCAAGGA TTATTTCAACCAGACACTATCCTCCTTCTTCATTGAAGAAGGAATCATTCATGAGTCCTCTTGTGTTAACACCCCACAACAAAATGGAGTGGCTGAACGA AAAATTGGGCATCTTGTAACTATTACCCGCGCATCTTTACTCCAAAAAAATGTTCCTAAACAGTTCTGGGGGGAAGCTATCCTTACCTCTACCTATTTGA TCAACTGATTACCCTAAAAAACATTGAACAATAGTAGCCCGTTCAGCTTCTATCTAATTTTTTTCCAGATTTCAAAACAACATCTCACCTTGTTCCTCGG GTCTTTGGGTGTGTGTCATTTGTCCATGTTCATCCCAATCATAGGAGGAAACTTGATTCCCGGGCGATTAAGTGCATCTTTATTGGTTACTCACAAACCC AAAAAGGATACAAGTGTTATCACCCTCCAACAAAACGGGTTTTTGTGTCATTTGATGTCACCTTTGATGAGAAATCATCATTCTTCCAACCTTATCTTCA GGGGGAGAACTCACACATAGAAGATAAGGATGATCATTTCTTATTGGATAACCCGTTTGTGGAAAGTCTCTCATTCCCTAAATCAAACTCGGTTCAAATC CCACCTATTTTGATCCCTGAATCAACTCCTGTTCAAATACCAGCCGCTGTAAGCACACAAGCAAATGGAAATCACACTCAGAATGCTACCCATCCATTAC AAGTATACTCTAGAAGGACAAAGGTCATTATCCAATCTCCACAAGTCCCGAATTCTGAACCAGTATCTGAAATACCAGAAACTAATGGTGTTGGACCAGG AGAACAAAATATACCTATTGAAGATGGGACCATTGAAGATGAAGATCTCCCAATTGCAAAAAGGAAAGGGGTTAGAATGTGCACTAAAAATCAAAGGTAC CCATTATCTAATTTTGTGTCATATGATAAATTCTCTAGCAACTAAAGAAGCTTCCTCACTCAACTACACACTATTACAATCCCAAAAACTGTTGACGAAG CATTACACAGTAAGGAATGGATAGATGCTATGAAGGTTGAGATGGTTGCACTAGAAAAGAACAAAACTTGGGAGTTGGTAGAACTACCTAAAGGAAAAAA GCTTGTTGGATGTAAGTGGGTCTTCACAGTTAAATACAAAGCTGACGGGACACTAGAAAGATATAAGGCAAGGTTAGTGGCTAAGGGGTATACTCAAACA TATGGAGTTGATTATCTTGAAACTTTTTCACCTGTTGTGAAAATGAATACTGTTAGAATTTTGTTATCTCTAGCAAGTAACTATGTGTGGAATTTACTGC AATTTGATGTTAAAAATGCTTTTTTACATGGTAATCTTGAAGAGGAAATATACATGGAGGTTCCCCCTGGGTTTGAATCTGTTAAAGGTAAAGTGTGTAA GCTTAAGAAGGCCCTCTATGGACTAAAACAGTCACCTAGGGCGTGGTTTGGTAGTTTTACGAAAGTTATGAAGAATATGGGATACAAGCAAAGTCAAGGT GATCATACCTTATTTATTAAATACTCACCCTCAGGGGGAGTTACTGGAGTTACTGCACTGATTGTATATGTAGATGATATAGTTGTTACAGGAAATGATC CAAAGGGAATGGAGACCTTAAGAAAGTGTTTGCTGCAAGAATTTGAGATCAAAGACCTAGGAAAGCTAAAATACTTTCTAGGGATTGAAGTAGCTCATTC TAATCATGGAATATTCATCTCTCAACACAAATATGTGCTGGACCTATTGGCAGAAACTGGGAAGCTTGGTTGTAAGCATGTAGAGACACCTATTGAACAA AATCACAAGTTGAGTGAAGCAACAGGAGGTGATGTGGTTAACAAAGAATCATACCAGAAATTGGTGGGAAAATTAATCTACTTGTCTCACACAAGACCTG ACATAGCCTATGCATTAGGGGTGGTAAGTCAATTTATGCATAATCCTAAAGAAGCACATCTTCGGGCTATTCACCGCATCCTGCAGTACTTGAAAGGAAC TCCTGGAAAAGGAGTTTTGTTTACAAGAGGGAAGGACATGTCATTGGAAGCATACACAGATGCTGACTACGCTGGATTTATAGATGATAGAAGATCTACA TCTGGATATTGCACATTTCTTGGAGGAAATTTGGTGACTTGGAGGAGTAAAAAACAAAATGTTGTTGCAAGGTCAAGTGCAGAGGCAGAGTTTAGAGCAA TGGCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_60067; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_202470
| Blastp | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 44.67% of identity |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 37.6% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_017415203.1) |
| Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |