Id Trinity | FTRINITY_DN56428_c2_g1_i4 |
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Name Transcript | Ll_transcript_202428 |
Sequence | TTTAAATGTTGTGTTATCACAGACACATATAAAAAGCTTCTCCTTTTTTTTGTTTTCCTATCGCTCAATTCAAATCGTTCCTTTTTCATAAAAATTCTCA CTCCGTTTTTTCTTCTTCCGTTTCTTGTTCTTCGTTCCGGAGATCGAAATCATCGTTTCAATCTCTCTTTGATTCTTTCCCTTCTTCTTAATTTTCCCTC TACATTCGCAAAAGAGAAAAATCCCTCAAAATCTTTACGTTTCAACCGTTAATTCCATCATTGTTCGATTCTGGGGGTTTTTGCTTCTAAATTCAACGTG GTTCGTGTTGATTTCGGGGTTCTCCAAACAGTGCGGGGTTCAAACGTTGTGGTAGGTATAGCGCGTGCCTTGAAGGTTCGGTCGTTAATTATTCAATTCG TATTGGCCACGATTCGAAATTAGGGTTTTAAGGTGATTCGTTTGAGGCACGATCTTAGTATTGGGATGGTTACAACATGATATTTAATCAGACAAGGACA ATTGAAATGCCGAAATTGAAACGTTGTGATCTGGATGGGGCGAACTGTGACGGGCATGAATATTCAGCGATTCAGAAGAAGCGTAAGGGGAATGGGTTTT ACTCTTTAGCTAAGCCATGTGATGATGAAGATTTCAGTAGCGGTTCTGGCTCTTGGTGCAGTGAAGGGTCCTACTGGGATGGTAGTGGTAGTGGTGCTGA GGTTCAGTCCAATTCAAACTCAATTTCAAAGCAGTTCCATGGTAAAACAGCTAGCCGACCTCCATTGCTGCGGTCTTCGCGTGGCCGTGTTCAGACGCTG CCATCAAGGTTCAGTGACTCGGTTCTTGATACATGGAGGGATCAAGGAAATAAAATGGAGGGCATAGGTTACTGCGATGAAGATGGTAATAACAATAGTT TAGTGGAAGATAGGGCGAGCATTAGTGACTGGGATAACTATGGTTTGGAAAATTTTCAATGTTGTTCTGGAGTGAAGGTTAGAATGGAAATAGATGACGA AAGGGAGCATGCTAATTCGTCTAGTATTGGTAAAAGGAGTAATACATCTGGACTTAGTTTTGAGGCTGTTGATCAAGTCCCTAATGGGAAAGGTGGAAAG GGGAAAGAGATTTACAAACCAGAGGATTTTGCACTAGGTGATATAGTTTGGGCAAAATGTGGGAAGAGATATCCGGCCTGGCCTGCTGTAGTGATTGATC CTCTCTCTCAGGCTCCCAAAGCTGTGCTCAGCTGTTGTGTTCCTGGTGCACTCTGTGTCATGTTTTTCGGTTACTCGAAAAATGGAAAGCAAAGGGATTA TGCGTGGGTAAAGCAGGGAATGATGTTCCCATTCTTGAAATTCATGGAAAGATTTCAGGGGCAGACCCAGTTGTACAAGAGCAAACCAAGTGATTTTCAC ATGGCATTGGAGGAGGCAATGTTGGCGCAAGATGGCCTTCTGGACTCACAATTGGGAGTAGAGGAAGTAACTAATGTAAAAGCTCATTCAGATGGACTTA AACAGGCCACAAGTTCATATGTTGATCATGAATGTTACTATCAGGGTCAGGATGCAAGATCTTGTGCTGGCTGTGGTTTGATGTCACCATGCAAAACAAT GAAGAAGCTTAAGGATTCAAGTTGTGAACCTCAACTTTATTGCAAACATTGTGCAAAGTTACGAAAATCAAAACAATATTGTGGTATTTGCAAAAGGATA TGGCACCATTCAGATGGTGGGAATTGGGTATGCTGTGATGGTTGTAACGTCTGGGTGCATGCTGAGTGTGCAAAAATTTCCAGCAAAAATTTCAAGGATT TGGAAAATATAGATTACTATTGCCCAGATTGCAAGGGAAAAATCAATTATAAATCACCGGCACCGCAGACATATAATTCAGAAATCAAATCAATGAAGAG TAGTCAAAAACCTGTGATACCTGAGAAGGTAATGGTGGTGTGCAATGGCATGGAAGGAACTTACATCCCAAAGCTTCATTTGGTTATGTGCAACTGTGGC TCTTGTGGTTCACGGAAGCAGACCCTGAGTGAATGGGAAAAGCATACAGGTTGCAGAGCCAAAAAATGGAAACATAGTGTGAAAGTAAAAAGCACAATGC TACCACTTGAAAAATGGATCACAGAACACATTTCAGAAGATGGAGTTCCCCCCCTGCAGCTAGATCAGCAGCAAGTGCTTGCCTTTTTGCAAGAGAAGTA TGAGCCAGTTCATGCAAAATGGACAACAGAAAGATGTGCCATTTGCAGATGGGTTGAAGATTGGGAGGACAACAAAATGATTATTTGTAACAGGTGCCAA ATAGCAGTCCACCAAGAATGCTATGGGGTAAAGAATGTTCAGGATTTTGCTTCTTGGGTTTGTAGAGTATGTGAAACTCCTGATGTTGAAAGAGAGTGTT GCCTCTGCCCAGTTAAAGGTGGTGCTTTAAAGCCAACTGATGTCGAGATGCTGTGGGTTCATGTTACTTGTGCTTGGTTTAAACCCGAGGTTGTTTTCCA AAACCATGAGACCATGGAACCTGCCTTAGGAATCCTTAGAATTCCTCCAAATACCTTTGTCAAGACTTGCGTGATCTGTAAACAAAACCATGGTTCCTGT GCAAGTTGTGTCAAGTGTGCTACTCATTTTCATGTGATATGTGCTGCAAGAGCAGGATATAGCATGGAATTGCATTCAATAGAGAAGAATGGGAGTCAAA TAATAAAGAAGCTAATATACTGTGCAGTTCACAGATTCAGTACTGGTTATGCATACACCCATGGGGGTTTTCTCTCCCAGGACTTCATTTCAAAATCATA AGGGATGCTTAAGGGGATCAAGGCTGGTTTCATCAAAGAATGCTGACCTTAATGAATTTCCAACCTCTGAAACTGACATGGTTGAGCAACTTTTCACTGC TCGTTGTCGTGTGTATCGAAGGTCTCCTAACAAGAGGGCTAATGTACCAATAATTCACTTGCTGAGGGGACCCAGTCTTCATTCCTTAAGTGCTGTAATT CAATTGAACAACTATAAGAGTGGTGAAGATTCCGAAGTATTTACTTTCAAAGAACGTCTTCATCATTTACAGAAGAAGGAAAAGCATATCATTTGCTTTG GAAAATCCGGTATTCATGGATGGGGTCTCTTTGCTCGAAGAGATATACAAGAAGGAGAGATGGTTGTTGAATATCGTGGTGAGCAGGTTAGGCGTAGTGT TGCTGATCTGAGGGAAGCAAAATACCGTTTAGAAGGCAAAGATTGCTATTTGTTCAAGATCAGCGAGGAAGTGGTAATCGACGCAACTCACAAGGGCAAC ATTGCTCGCTTGATAAACCATTCTTGCATGCCAAACTGCTATGCCAGGATCGTGACTTTGGGTGATCGGGAGAGCCGGATTGTTCTGATTGCCAAGATTA ACGTTTCTGCTGGGGAAGAACTCACGTATGATTATTTGTTTGATCCAGATGAGCGTGATGAATTGAAGGTTCCATGCCTTTGCAATGCTCCTAATTGTAA AAAATTTATGAACTAGGTTTTCACAGTTTTTTGTTCCTAGAGCAATAAGCAATTGTATTAACCTAACCATAGAGATCAAATTTGTCCATTGGAGCATATA TTCTTTTGTTGTTTCCAAAATATTGGCATAATTTGTATATCATTTTGCTATTATACAGTAAATATCTTAGTAATGGGTGTAACTTGCGACATGGTTTATA TATATATCCAAATTGTTTACATTTGAAAGCAATTTGCTTTAAAGTGTGTAGAAGCACAAATAATATTTAGTTTCAGG BLAST |
Tissue | flowers |
Gene name | LI_gene_60091; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_202428
Blastp | Histone-lysine N-methyltransferase ATX3 from Arabidopsis with 56.58% of identity |
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Blastx | Histone-lysine N-methyltransferase ATX5 from Arabidopsis with 49.49% of identity |
Eggnog | Histone-lysine N-methyltransferase(COG2940) |
Kegg | Link to kegg annotations (AT3G61740) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461947.1) |
Pfam | PWWP domain (PF00855.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |