Ll_transcript_202252

Id TrinityFTRINITY_DN56441_c3_g1_i5
Name TranscriptLl_transcript_202252
SequenceTTTCTCTTAACCTGGCTTCTTTTTCTGTGACATAAGTGTACAGATGAAACTGGGTTCAACATAAATACATCTTCACTTAGTTGACTGATGGAAATTTGTC TAGTGAGAGAACTTAAATAGGAATTAAAGACAGTCTTATTTCATTTTATTTGGCTGTCTATAAAGGTTTAATTCTTTGTAATTCCTGCAAGAGTGATCTT GTGTTGTAAAATAAATGTTTTTGGCTTTCAGATTCATGGTAAAACAGAGTTGGTAACATCATCAAAACGTCCAGTTCCACTAACTTGGCATTTTTCTATG AAGAATTCCTTATTACCACTTCTTGATGAGAAAGGAACACGTATGAACAGGAAGCTGTCACTCAATTATTTACAACTTCAAGCTGCAGGAGCTAAACAAT ACAAGGATGATGGGCCTAGAAAAAGGAATTCACGGAGACGAGGAACTCACACAAGCTATGATAGTGATGGTAGCATGTTTGAGCAACGTTCTCTTTCAAA GAATAACATAAATGCAATTCGTCGTTCCCAAGTTCCTCAAGTAGTTGATACGTTATGGCATCTTCAGTCTAGGGATATGCTGCCAGCTGTGTGGTTTATT TTTAGCAGAAAGGGTTGTGATGCAGCTGTGCAATACCTTGAAGATTGCAGACTATTAGACGATTGTGAAACAAGTGAGGTTGAGCTAGCCTTGAAGAGGT TCCGCATTCAGTATCCTGACGCTGTCAGAGAAACAGCTGTGAGAGGACTTCTGCAAGGGGTTGCTGCACATCATGCTGGTTGCCTACCTTTGTGGAAGGC ATTCATAGAAGAACTATTTCAAAGAGGACTTGTCAAGGTTGTTTTTGCTACAGAAACCTTGGCTGCTGGAATCAATATGCCTGCTAGAACAGCTGTCATT TCGTCACTTAGCAAAAGAAGTGACAGCGGACATGTCTATTTAAGCTCAAATGAACTGCTTCAGATGGCTGGGCGTGCTGGACGCAGAGGCATTGATGAGC GTGGTCATGTAGTCCTCATCCAAACACCTAATGATGGTGCTGAGGAGGGTTGCAAGGTCTTGTTTGCTGGACTTGAGCCTTTAGTGTCCCAGTTTACTGC CTCATATGGAATGGTATTGAATCTTCTTTCTGGTGTAAAAGCCATTCGGTCAAATGAACCAGATGAAGTGAGACCTTCATCAGGAAGAACTTTAGAAGAA GCTAGGAAGTTAGTTGAGCAGAGTTTTGGAAATTATGTTAGTAGCAACGTTATGCTGGCTGCCAAGGAAGAAATTAAAAAAATTAAGAAAGAAATTGAAT TGCTGATGTCAGAAATCACTGACGAAGCCATTGATAGAAAAAGCAGGAAGGCTTTATCACAGTGGGAATACAATGAGATCACGGAGTTACAGGAAAATTT AAGGGCAGAAAAACGTGTTCGGAGTGAATTGCGGAAACAGATGGAAGCAAAGAGAATTTCTGCCCTGAAACCTATACTGGAAGACCCTGAAAGGGAACAT CTACCATTTTTGTGCTTGCAGTATAGAGATTCTGAAGGAGTTCAACATTCAATTCCTGCAGCATATTTGGGGAAGGTTGACTCCCTAAATGCTTCAAAAC TCAAGATCATGATTTCTTCAGATGATTCTTTTGCGTTAAATTTTTTAGATGAAGAGCCAACAGGTGTTACTGATTCTTCATTAAATAAAAATCTTGAACT ATCATATCATGTGGCTCTTGGTTCAGATAACTCCTGGTATCTATTTACAGAAAACTGGATTAAAGCAGTATATGGGACAGGCTTTCCTAATGTTCCATTG GCTCAAGGGGATGCTCTACCTCGAGAAATTATGAGTACTCTCCTTGATAAGGAGGAAATGAAGTGGGATAAGGTTGCTCAATCCGAACATGGTGGTTTAT GGTTCGTGGATGGATCTCTAGAAACATGGTCTTGGAGTTTGAATGTTCCTGTTTTGAGTAGCTTATCTGAAAATGATGAGCTACTTTTAAAGTCTCAAGT CTACCAAGATGCCGTTGAACTTTACAAGAACCAAAGAACTAAAGTTGCACGCTTGAAGAAAAAGGTATCCCGTACTGGAGGGTACAAAGAATATAACAAA ATCATAGACGCTGTCAAGTTTACTGAGGAGAAAATCAAACGGCTGAAGACTAGATCAAAGCGCTTGTCTAATCGTATAGAACAAATTGAACCCGCAGGAT GGAAAGAGTTTATGCATGTTAGCAATGTCATACATGAAACCAGAGCTTTAGATATTAATACACATGCCATCTTTCCACTTGGCCAAACCGCGGCTGCAAT TCGAGGAGAAAATGAGCTTTGGCTTGCAATGGTTCTTCGCAATAAAAGTTTACTGGAACTAAAACCTGCACAACTTGCTGCAGTTTGTGCAAGTTTAGTG TCGGAGGGTATCAAAGTCCGACCTTGGAAAAACAACAGTTATATTTACGAGCCTTCTGCAACTGTAGTCAATTTCATAAGGTTGTTGGATGAGCAAAGAA AGGTCCTGATGTCAATTCAGGATAAACATGATGTAACAATATCTTGCTGTTTGGATAGCCAATTTTGTGGCATGGTTGAAGCCTGGGCTTCTGGTTTGAC ATGGAGAGAAATAATGATGGATTGTGCTATGGATGATGGTGATCTAGCTCGCCTCCTTCGTAGGACCATTGACCTTTTAGCCCAGATTCCGAAATTGACA GATATTGATCCTTTGTTGCAGCGCAATGCAAAAGTTGCATATGATTTCATGGATCGGCCTCCAATAAGTGAGCTTGCTGGGTAATAGTAGTGTCTTTGTT CTCCTGTCCTGTGCTCCATTTGTAAATATTATTGTTGTATGATTAATTTCCCTAAATTATTTTCTTCTTCACAAAACCCACTTTTCAGTTAACTTAATTG TTTTTATTATTTTGATCTCTCCTCTTCTTCTTTTTTGCGCATTTTGGTATGTTAACGCAATTTCTGTTAGTGTATTAGTCACTCTTGTCAAAAAAAAATT GTAACCCGGCTATTTTAGAGCTCCATGGTGTTCTTCTTAACAGAATAAGAACATTTTTACTCTATTTTCTATTGTGGGATTCTTATTTTTTAAGTTTTGT TTTTAAATAAGAATATTTTTTGTTGTAACTAAGAGAAGTAATGAGAGAGATGTTGTAAGGAAAATGTAGATATTGTTG BLAST
Tissueflowers
Gene nameLI_gene_60179; 
Additional informationdetails; 

Expression of Ll_transcript_202252

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_202252
BlastpDExH-box ATP-dependent RNA helicase DExH15 chloroplastic from Arabidopsis with 67.35% of identity
BlastxDExH-box ATP-dependent RNA helicase DExH15 chloroplastic from Arabidopsis with 67.68% of identity
Eggnoghelicase(COG4581)
KeggLink to kegg annotations (AT1G70070)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019445516.1)
PfamHelicase conserved C-terminal domain (PF00271.30)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;