| Id Trinity | FTRINITY_DN56441_c6_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_202267 |
| Sequence | CACCATTCACATTCACGGTAAGAAATAAAGAATGAAGGGAAAAAAAGGAATAAGAAAGTGGAAGACAAAGCCAGAGGGATGAGGACAAAATCGTCAATCT CATAATTGAATCGAAGCGCATTCATTTCTCTATTTGTCGTGTTCGAAAACCATCAAAAAACAGGTAACCTTAACCTTTACTTCACCTGCCCCATTATCTT TCCTTTTCCCCAAAACCTTAAGCATTTTCATTATAATAAATTAATAAAAACCACCGCAATTTAATCAAATTTCTTCTCTCACACAATCACATACAGACAC CGTTAACCATTTTGGCCTTTAGTTTCCTTTCTGATCTTCACTCACTCTATTTATTAACCCTTGGTTCACCTTCTCCACAACAACAACAACATCAAGACTC TAACTTTGTTGTTCCAGTAGAAAGACACGGCAAAAGGGTGTTGATTTCTGTCTTCATAATTTCAATTGGAGCAATATCGATGAAGCGTGCTCTCTCTGGC GAGGTTGAGGGTAGGAAAATGAAAAGGGTAAAAGTGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGAGTGGTTATGGGGTTGGGTATTTCG ATGAGAATCTTCTCTTCGAGGTGTTAAAGCACGTGGATGCAAGGACGCTGGGTATGGCGGGGTGTGTGAACAAGCAGTGGCAGAAAACTGCGAATGATGA GAGGCTATGGGAGTTGATCTGCACAAAACAGTGGCCAAACACTGGCTGCGCCGAACAACAGTTACGATCTGTAGTCCTTGCTCTTGGTGGATTCCGTCGT CTTCACGCGCTTTATCTATGGCCTATTTCCAAACCCCAAAAACCATCTTCATCATCATCTTCTTCTTCTTCTCTCTTCCGCTTTCACCATGTCTACCCTT CAACCTCACATCAATTCTATCCGTTCCTACGAGTTACGCCTCATCCGTTCTACTCTCTCCCCTCCACCGTCCGATCCTCTCCCTCAATCTCAACCCTCCG ATCACCATCTCCACAACCTAATCAACGCTATCCTCGCTTCAATCGAATCAGGCTCTTACCTTCAAGCCCTTACTTCTGAGTCTTCTTCTCTCGTCTTCCA ACTCGGTCATGACTCGCCCCTCCCTCAACTCGACAACTCACTGGACTCTGCTGACCGAGTCTACTCCGAGTTGCTCGACCGCGCCGAGCTTTTCATACGA TACGATTCGACGGATAGTGAGGCTGATAAGGCTTCCAGGGTGGTGCTCGTGCTGTGCATTGCCGTTGCCGCGTTTCTAGGGTTTACACAATGTAACTTCA CAGGGCCTTTGGAGGGATTACCAAGATGCCCTCTGCCATTGGAAGCAGGTGAATTTACAGAATGGGACAATTGGGCGCGCAATCAGCTTATGTCTGCTGG CTCCGACTTGCTTGGGAAGTTCTCAAATCTTCAGTATATAGTTTTTGCTAAGATGTTGCTTATGCGGATGAAAGATTTATTATTTCAAGGAACGACATCT TCTACAATTGAGATTAGAAGCCTTTCATGGTGGCTTGCAAGGATTTTGCTTCTTCAACAGAGAATTTTGGATGGGCGGTCTTCTTCTTTGTGTGATATGT TGCATGTCTATATCGGCCAAGCTTTACAGCACTTTAGCTCTTCAGAAGAAGTTAAAAGTTATTGGGTTTCTAATTTACGTGATGGAGAGAGCTTAGCTAT TGTCTCCATGTTGCATTTAGAGGCTGGTATTATGGAATATGCCTATGGACGAGTCGACTCTTGCAAGAAACATTTTGAGTCTGCTGAGATGGCATCTGGG CTTCAGCTTTCAGTGACTGGGGCACTTGGTTTCCGTACTGTGCATCAGGTAAGCATAGTGAATTGCATGATAAGCATTTATCATGGAACTTACCTTTTAA TATGTAATTATTCTTGGACATAGGTAGAACCAAAGGCTCAAAGGGTACTTGTTACAAACACAAGCCCATCAAACAATTTCAATGGAAATGACATCCAAAA GTGTGATTCCAGTACTCATGAAGCTAACTTGCATCAGCGTGAAAGCAGTGAAGTATCTGACATACTTATAATACCAAAGTTGTTAGAAAATGATGACAAC TCTAAAACTAGGCCACAAGGCAGCGAAAATGGTGTTCATATTACTACTAGTTTGACAGCAACACAACAGGCTGTAATTCTTGCACATTGCCTTCTAATTG AGAAGAGCTCCCGACAAGATGAATTGCAAAGATGGGATATGGCTCCTTATATTGAGGCAATTGATTCACAGCGTTTGTCTTACTTCATTATACGATGTTT CTGCGATATCTTGCGTATTCGATGGGAGTCGTCCCGTAGTCGAACAAAGGAGCGTGCTTTACTGCTGATGGAAAACATGGTGCAACGCATTTATGAGTCT TCTCCAGCAGTAGCAGAAAGAACTCCTCTCAGTTGTGGTGTTTATATGCCCAGTGTTCCTGCATTGAGAAAGGAATATGGTGAACTCTTGGTGCGCTGTG GTTTGATAGGGGAGGCATTGAAAGTGTTTGAAGATTTGGAATTATGGGATAATCTCATACACTGCTATTGCCTATTGGAGAAGAAAGCAACAGCTGTTGA ACTCATCAGGAAACGTCTTTCAGAAAGACCCAATGATCCCAGGTTATGGTGCTCCCTGGGTGACACTACAACTAATGACGCATGCTATGAAAAAGCTTTG GAGGTTTCAAACAATCGGTCTGCTAGAGCTAAGCGTTCTCTGGCTCGCAGTGCATACAATAGGGGAGACTATGAGACATCTAAAATTTTGTGGGAGTCCG CAATGTCCATGAACTCTATGTATCCAGATGGTTGGTTTGCATTTGGGGCCGCTGCACTGAAGGCACGGGATATTGAAAAGGCTCTGGATGCTTTTACTCG TGCTGTTCAACTTGATCCTGACAATGGGGAAGCTTGGAATAACATCGCTTGCTTGCACTCGATCAAGAAAAAGAGCAAGGAGGCCTTCATTGCATTTAAG GAAGCCTTGAAGTTCAAACGAAACAGCTGGCAACTCTGGGAGAACTACAGCCATGTTGCTGTTGAAGTTGGCAATATTAGTCAGGCATTAGAAGGTGCAC AGATGGTTTTGGACCTGTCCAAGAATAAAAGAGTAGATGTTGAATTATTTGAAAAAATCACAAGGGAGGTGGAAAGCAGGCTTCCAACAACTAATTCTTT GGATCCTTTAACAACTGATAATGAGTGTAATACAGATCAATGTTGCATTGCTGATGCTGGATCAGAACATGCAAAGCAAGGATCTGGAGTATCTGTTTCT GGAAGATCACGTGAAACAGAGCAATTAATATCATTACTTGGAAAAGTTTTACAGCAGATAGTTAAACATGGGAATGGATGTGGACCTGAAATATGGGGCT TATATGCCAAATGGCACAGAATTAATGATGACCTTGTGATGTGTTCTGAAGCTCTCTTAAAGCAAGTTAGATCACTCCAGGGATCTGACACATGGAAAGA CCAAGATCGCTTCCAGAAGTTGGCAAAAGCATCCTTGGAACTTTGCAAGGTATACATGGAAATTTCCTCTTCTACTGGTAGTAAGAAAGAATTGTTTACT GCTGAGATGCACCTGAAGAACATCATCAAACAGGCTCAGAGCTTCTCTAATACAGAAGAGTTCAGGGATATTCAGGCTTGCCATGACGAAGTGAAAATCA AGCTCCAACCGAATTAAATGGCTTGCTAAAATTTTGTTGAAGGCATTATTCAATTTGTAATGTAAGTTCTAACTTACAAGTTTTGACATGGTGTCATTAG ATTGAAGTTCAACCCAATGAAACCACAGAGGCATACATCAACAGAGGATGTCAAAAGCTTGCTCTCAGAATACATGGCTGAAAGTAATAAGAATGTGCTT TGTATCATACAGTTTATGTTGTAGCATATTATTTAACATTCTTTAAGGAAATCGCAGATTGTTATGTTGAAGGGAAAAAAGAGAAAAAGACTACTCAATT TATTATTGATACACTGATACCTTAAATATTTATTGTTTATTTTTGGATGGTAAGGGAAGTAATATTAAGACTTGAGTCATGAACAGGACTCATCTGAAGT ATTTGTTTCCCTTTCTTCTCTCTCAAAATTTAACTTACAAAAAAGATTGTAAGACTTTTAAAGTGATTTTAGTTTGAATTAAAATGATTCGATCTTTAAT TCAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_60186; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_202267
| Blastp | Tetratricopeptide repeat protein 27 homolog from Dictyostelium with 27.74% of identity |
|---|---|
| Blastx | Tetratricopeptide repeat protein 27 homolog from Dictyostelium with 25.67% of identity |
| Eggnog | Tetratricopeptide repeat domain 27(ENOG410XNXB) |
| Kegg | Link to kegg annotations (DDB_G0293372) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433908.1) |
| Pfam | Tetratricopeptide repeat (PF07719.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |