| Id Trinity | FTRINITY_DN56441_c6_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_202268 |
| Sequence | CACCATTCACATTCACGGTAAGAAATAAAGAATGAAGGGAAAAAAAGGAATAAGAAAGTGGAAGACAAAGCCAGAGGGATGAGGACAAAATCGTCAATCT CATAATTGAATCGAAGCGCATTCATTTCTCTATTTGTCGTGTTCGAAAACCATCAAAAAACAGGTAACCTTAACCTTTACTTCACCTGCCCCATTATCTT TCCTTTTCCCCAAAACCTTAAGCATTTTCATTATAATAAATTAATAAAAACCACCGCAATTTAATCAAATTTCTTCTCTCACACAATCACATACAGACAC CGTTAACCATTTTGGCCTTTAGTTTCCTTTCTGATCTTCACTCACTCTATTTATTAACCCTTGGTTCACCTTCTCCACAACAACAACAACATCAAGACTC TAACTTTGTTGTTCCAGTAGAAAGACACGGCAAAAGGGTGTTGATTTCTGTCTTCATAATTTCAATTGGAGCAATATCGATGAAGCGTGCTCTCTCTGGC GAGGTTGAGGGTAGGAAAATGAAAAGGGTAAAAGTGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGAGTGGTTATGGGGTTGGGTATTTCGATG AGAATCTTCTCTTCGAGGTGTTAAAGCACGTGGATGCAAGGACGCTGGGTATGGCGGGGTGTGTGAACAAGCAGTGGCAGAAAACTGCGAATGATGAGAG GCTATGGGAGTTGATCTGCACAAAACAGTGGCCAAACACTGGCTGCGCCGAACAACAGTTACGATCTGTAGTCCTTGCTCTTGGTGGATTCCGTCGTCTT CACGCGCTTTATCTATGGCCTATTTCCAAACCCCAAAAACCATCTTCATCATCATCTTCTTCTTCTTCTCTCTTCCGCTTTCACCATGTCTACCCTTCAA CCTCACATCAATTCTATCCGTTCCTACGAGTTACGCCTCATCCGTTCTACTCTCTCCCCTCCACCGTCCGATCCTCTCCCTCAATCTCAACCCTCCGATC ACCATCTCCACAACCTAATCAACGCTATCCTCGCTTCAATCGAATCAGGCTCTTACCTTCAAGCCCTTACTTCTGAGTCTTCTTCTCTCGTCTTCCAACT CGGTCATGACTCGCCCCTCCCTCAACTCGACAACTCACTGGACTCTGCTGACCGAGTCTACTCCGAGTTGCTCGACCGCGCCGAGCTTTTCATACGATAC GATTCGACGGATAGTGAGGCTGATAAGGCTTCCAGGGTGGTGCTCGTGCTGTGCATTGCCGTTGCCGCGTTTCTAGGGTTTACACAATGTAACTTCACAG GGCCTTTGGAGGGATTACCAAGATGCCCTCTGCCATTGGAAGCAGGTGAATTTACAGAATGGGACAATTGGGCGCGCAATCAGCTTATGTCTGCTGGCTC CGACTTGCTTGGGAAGTTCTCAAATCTTCAGTATATAGTTTTTGCTAAGATGTTGCTTATGCGGATGAAAGATTTATTATTTCAAGGAACGACATCTTCT ACAATTGAGATTAGAAGCCTTTCATGGTGGCTTGCAAGGATTTTGCTTCTTCAACAGAGAATTTTGGATGGGCGGTCTTCTTCTTTGTGTGATATGTTGC ATGTCTATATCGGCCAAGCTTTACAGCACTTTAGCTCTTCAGAAGAAGTTAAAAGTTATTGGGTTTCTAATTTACGTGATGGAGAGAGCTTAGCTATTGT CTCCATGTTGCATTTAGAGGCTGGTATTATGGAATATGCCTATGGACGAGTCGACTCTTGCAAGAAACATTTTGAGTCTGCTGAGATGGCATCTGGGCTT CAGCTTTCAGTGACTGGGGCACTTGGTTTCCGTACTGTGCATCAGGTAGAACCAAAGGCTCAAAGGGTACTTGTTACAAACACAAGCCCATCAAACAATT TCAATGGAAATGACATCCAAAAGTGTGATTCCAGTACTCATGAAGCTAACTTGCATCAGCGTGAAAGCAGTGAAGTATCTGACATACTTATAATACCAAA GTTGTTAGAAAATGATGACAACTCTAAAACTAGGCCACAAGGCAGCGAAAATGGTGTTCATATTACTACTAGTTTGACAGCAACACAACAGGCTGTAATT CTTGCACATTGCCTTCTAATTGAGAAGAGCTCCCGACAAGATGAATTGCAAAGATGGGATATGGCTCCTTATATTGAGGCAATTGATTCACAGCGTTTGT CTTACTTCATTATACGATGTTTCTGCGATATCTTGCGTATTCGATGGGAGTCGTCCCGTAGTCGAACAAAGGAGCGTGCTTTACTGCTGATGGAAAACAT GGTGCAACGCATTTATGAGTCTTCTCCAGCAGTAGCAGAAAGAACTCCTCTCAGTTGTGGTGTTTATATGCCCAGTGTTCCTGCATTGAGAAAGGAATAT GGTGAACTCTTGGTGCGCTGTGGTTTGATAGGGGAGGCATTGAAAGTGTTTGAAGATTTGGAATTATGGGATAATCTCATACACTGCTATTGCCTATTGG AGAAGAAAGCAACAGCTGTTGAACTCATCAGGAAACGTCTTTCAGAAAGACCCAATGATCCCAGGTTATGGTGCTCCCTGGGTGACACTACAACTAATGA CGCATGCTATGAAAAAGCTTTGGAGGTTTCAAACAATCGGTCTGCTAGAGCTAAGCGTTCTCTGGCTCGCAGTGCATACAATAGGGGAGACTATGAGACA TCTAAAATTTTGTGGGAGTCCGCAATGTCCATGAACTCTATGTATCCAGATGGTTGGTTTGCATTTGGGGCCGCTGCACTGAAGGCACGGGATATTGAAA AGGCTCTGGATGCTTTTACTCGTGCTGTTCAACTTGATCCTGACAATGGGGAAGCTTGGAATAACATCGCTTGCTTGCACTCGATCAAGAAAAAGAGCAA GGAGGCCTTCATTGCATTTAAGGAAGCCTTGAAGTTCAAACGAAACAGCTGGCAACTCTGGGAGAACTACAGCCATGTTGCTGTTGAAGTTGGCAATATT AGTCAGGCATTAGAAGGTGCACAGATGGTTTTGGACCTGTCCAAGAATAAAAGAGTAGATGTTGAATTATTTGAAAAAATCACAAGGGAGGTGGAAAGCA GGCTTCCAACAACTAATTCTTTGGATCCTTTAACAACTGATAATGAGTGTAATACAGATCAATGTTGCATTGCTGATGCTGGATCAGAACATGCAAAGCA AGGATCTGGAGTATCTGTTTCTGGAAGATCACGTGAAACAGAGCAATTAATATCATTACTTGGAAAAGTTTTACAGCAGATAGTTAAACATGGGAATGGA TGTGGACCTGAAATATGGGGCTTATATGCCAAATGGCACAGAATTAATGATGACCTTGTGATGTGTTCTGAAGCTCTCTTAAAGCAAGTTAGATCACTCC AGGGATCTGACACATGGAAAGACCAAGATCGCTTCCAGAAGTTGGCAAAAGCATCCTTGGAACTTTGCAAGGTATACATGGAAATTTCCTCTTCTACTGG TAGTAAGAAAGAATTGTTTACTGCTGAGATGCACCTGAAGAACATCATCAAACAGGCTCAGAGCTTCTCTAATACAGAAGAGTTCAGGGATATTCAGGCT TGCCATGACGAAGTGAAAATCAAGCTCCAACCGAATTAAATGGCTTGCTAAAATTTTGTTGAAGGCATTATTCAATTTGTAATGTAAGTTCTAACTTACA AGTTTTGACATGGTGTCATTAGATTGAAGTTCAACCCAATGAAACCACAGAGGCATACATCAACAGAGGATGTCAAAAGCTTGCTCTCAGAATACATGGC TGAAAGTAATAAGAATGTGCTTTGTATCATACAGTTTATGTTGTAGCATATTATTTAACATTCTTTAAGGAAATCGCAGATTGTTATGTTGAAGGGAAAA AAGAGAAAAAGACTACTCAATTTATTATTGATACACTGATACCTTAAATATTTATTGTTTATTTTTGGATGGTAAGGGAAGTAATATTAAGACTTGAGTC ATGAACAGGACTCATCTGAAGTATTTGTTTCCCTTTCTTCTCTCTCAAAATTTAACTTACAAAAAAGATTGTAAGACTTTTAAAGTGATTTTAGTTTGAA TTAAAATGATTCGATCTTTAATTCAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_60186; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_202268
| Blastp | Tetratricopeptide repeat protein 27 homolog from Dictyostelium with 25.4% of identity |
|---|---|
| Blastx | Tetratricopeptide repeat protein 27 homolog from Dictyostelium with 26.88% of identity |
| Eggnog | Tetratricopeptide repeat domain 27(ENOG410XNXB) |
| Kegg | Link to kegg annotations (DDB_G0293372) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433908.1) |
| Pfam | Tetratricopeptide repeat (PF07719.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |