Id Trinity | FTRINITY_DN56450_c2_g3_i13 |
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Name Transcript | Ll_transcript_200410 |
Sequence | ACAAGGAACCCTCTTGTTCTTCTTTCTTCATATTTCTCATTGTTCACATTTTTTGCATCTCTTTCTCTTAGTTGTCACTTGTACTTCCTTATAAAGAACA TAGCATTAGCTAAGAAGTTTTCTATGTTCCACTTTGTAGAAACTGCATTATTATCATAGAACAAGAAAAAAGGCTTCTGGGTTTTGTTGGGTTTGAGCTC AAGTTTCAAAAGTTGTAATCTTTAATAGTAAGAGCAACAATGGAGGGAAATGATATATATAGAGCAAGCAATAGTTTAAGAGTTAATAGTTCTACAGTTT CACGTGAGGAAAATGATGAAGATGCTCTTAAATGGGCTGCACTTGAAAAACTTCCAACTTATAATCGTTTAAGGAAAGGGTTGTTGACCACATCATTTGG TGTTTCCAATGAGATTGATGTCACTGATATTGGATTTCTAGAAAGACAGAAGCTTCTAGATAGGTTGGTTAAGGTTGCTGAAGAGGACAATGAAAAGTTT TTGTTGAAGCTCAAGAAAAGAATTGATAGAGTTGGACTTGATATTCCAACCATTGAAGTTCGATTTCAGCATCTAAATGTTGAAGCAGAAGCTTATGTAG GAAGTAGATCTTTGCCTAGTTTCTTGAACTTTGCTACTAATATAGTGGAGAGTTTCTTTACTTCCCTCCATATTCTCAAAAGCAAAAAGAAACATATGAC TATTCTTAAAGATGTCAGTGGAATCATCAAACCTCGTAGGATGACACTGCTATTAGGTCCTCCAAGTTCAGGAAAGACCACACTCCTTTTAGCCTTGTCA GGAAAGCTTGATCCAAATCTTAAGGTGTCTGGGAGAGTGACTTATAATGGATATGGAATGAATGAGTTTGTACCTCAAAGAACTGCTGCCTACATAAGCC AACATGATGTTCACATAGGAGAAATGACTGTAAGAGAAACCTTGGCTTTCTCAGCAAGGTGCCAAGGCGTTGGAACGCGCTATGACTTATTATCCGAGTT GTCTAGACGAGAGATCGAAGCAAAGATTAAGCCGGATCCAGATATTGATGTCTATATGAAGGCAACTGCAGCTATAGGCCAGGAGGAAAGTTTGGTAACA GATTATGCACTAAAGATTCTAGGATTGGATATATGTGCTGATACTTTGGTAGGGGATGAAATGTTGCGCGGTATCTCTGGAGGGCAAAGGAAGAGGGTTA CTACAGGGGAGATGCTGGTTGGACCGGCAAATGCGTTATTCATGGATGAAATATCCACCGGCTTGGACAGTTCCACAACCTTTCAGATTGTGAGCTCTCT CAGACAATATGTTCACATTCTTAACGGAACCGCGGTTATCTCTTTGCTCCAGCCAGCACCAGAGACTTATGAGCTTTTTGATGACATCATTCTTATCTCT GATGGTAAAATTGTCTACCAAGGACCCTGCGAATATGTTCTCGACTTCTTTGAATCTATGGGGTTTAAATGTCCTGAAAGGAAAGGTGTTGCTGATTTCC TTCAAGAAGTAACTTCAGTAAAGGATCAAGAGCAGTATTGGGCAAACAGAGATATACCATACAGGTTTGTAACTGTTACTCAATTTTCTGAGGCATTTCA ATCTTTCCACATTGGTAGAAGAATGGGAGATGAGCTTGCAGTTCCGTTCGACAAGTCGAGGAACCACCCAGCTGCATTAACCACTAACAAGTATGGTGTC AACAAGAAGGAGTTGTTAAAGGCTAACTTCTCAAGAGAGTATTTGCTTATGAAAAGGAATTCATTTGTTTACATCTTCAAGATATGCCAACTTACTCTCA TGGCGTTAATCGCGATGACACTATTTCTACGAACCGAGATGCACCGAGATTCACTAAGTGATGGAGGAGTTTATGCTGGTGCTCTATTTTTCACAGTAGT GATGATTATGTTTAACGGAATGGCTGAGCTTTCAATGACCATTGCAAAGTTACCTATCTTCTACAAGCAAAGGGACCTTCTATTCTATCCCTCATGGGCA TATGCCATTCCTTCATGGATCCTTAAGATCCCTATTACACTTATTGAAGTTGCTGTTTGGGTATTTCTCACCTATTATGTGATTGGATTTGATCCAAATG TTGAGAGATTATTGAAGCAGTACTTTCTGCTAGTACTGATCAACCAGATGGCTTCCGGATTGTTCCGAGCTATTGCAGCACTGGGTAGGAACATAATTGT GGCTAACACATTTGGGTCCTTTGCACTTCTCGCATTCCTTACATTAGGTGGCTTCGTTCTGTCAAAAAAGGATATCAAGAGGTGGTGGATTTGGGGTTAC TGGATTTCACCTTTAATGTATGGCCAGAATGCTATAGTGGTGAATGAGTTCCTTGGGAATAGTTGGAACAAATTAACTCCAACTTCAAATAAGACTATTG GAATGCAAATTTTGGAGTCTCGCGGATTCTTCACACAAGCATATTGGTATTGGATTGGGATTGGGGCATTGATTGGATTTATGATCCTTTTCAACATTGT GTACACTTTGGCTCTCACTTACCTTAACCGTGAGCGTCTCGATATTTTGTTCTTCAATATTCTTATAGCGATTCGAAATTTTATCCAAAAATATGCATGA TTTTGCAGCATTTGATAAGCCACAGGCAATGATGACTGAAGAATCAGAAGGCCAAGAGGTTGAATTAGCACACATAGGAAATTCAGGAAGAGCTAATGCT GTTATGGATTCTAGCCATGGAAAGAAAAGAGGAATGGTTCTTCCTTTTGAACCGCATTCTCTCACCTTTGATCAAATTGTTTACTCAGTTGACATGCCAC AGGAAATGAAGGATCAGGGTGCAATAGAGGACAGGTTAGTGCTTCTGAAAGGTGTTAGTGGTGCATTTAGGCCCGGTGTTCTCACAGCTTTGATGGGTGT GAGTGGAGCTGGTAAAACTACTTTGATGGATGTTTTGGCTGGTAGAAAAACTGGTGGGTATATTGAAGGGAACATTAAAGTTTCTGGATACCGTAAAAAG CAAGAAACGTTTGCTCGAATTTCAGGTTACTGTGAGCAGAACGATATACATTCTCCTCATGTTACTGTCTATGAGTCCTTGGTCTACTCAGCATGGCTTC GTTTACCAGCAGAAGTTGATTCAAATGCAAGAAAGGTTAGCATCTGCAGATTAAGACACACTATACCTTTTCGTTTTTACTTGATGTAGTATGGTAAAAA ATAATGTAAGTTTTTTATTAATATAGAGTTGAGACATCTATATATGTAGTATTTTTGTAAATTTGGTTCTATATATGTAGTATTTCTACTATTATAAATG TACATGGCAAAAAATATTTGCTATTTATATGTTTGTGTTTTTTTTTATATTTGGTCGCCCTTTGATGTTTTCTGTTTGCATCCCTGTCTGTTCTCGCATT TGGATCTGGCAAATGATTGTTGTACTTGTAGATGTTTATTGAGGAAGTCATGGAACTTGTTGAGCTAAACCCATTGAGGAACTCATTGGTTGGTTTGCCT GGTGTGAGTGGTCTCTCAACCGAGCAACGCAAGAGGCTAACGATTGCAGTTGAGTTAGTTGCTAATCCGTCGATAATCTTCATGGATGAGCCTACTTCTG GTTTAGATGCTAGAGCTGCCGCAATTGTTATGAGAACGGTTAGGAACACAGTTGACACAGGAAGAACTGTTGTTTGCACCATCCATCAGCCAAGCATTGA CATATTTGAAGCTTTTGATGAGTTATTCCTGATGAAGCGCGGAGGACAAGAAATATATGTCGGGCCACTTGGTCGCCATTCTAGCCAACTGATCAACTAT TTTGAGAGCATCGGCGGGGTTAGTAAAATTAAAGATGGCTATAATCCAGCAACTTGGATGTTGGAAGTAACAACTTCAGCACAAGAACTTAACTTAGGTG TTGATTTTCATGAGATATACAAAAATTCTGAACTGTATAGGAGAAACAAGCAGGTTATAGCAGAACTGAGCAACCTTGCTCCGGGTTCAAAGGATCTTTA TTTTGCTACTCAATACTCACAGTCACTTTTGGTTCAATGCCTGGCTTGCCTGTGGAAACAACATTGGTCATATTGGCGCAATCCACCATATACTGCAGTG AGGTTTCTCTTCACCACTTTCATAGCCCTGATGTTTGGAACAATGTTCTGGAATCTCGGAGGGAAAACGTAAGAGAAAATTCAGTAACATAGAAAACATG ACACTAGATTTGGCTAATTTTTTGTTTTCCACTTAAAGTCTGATTTTTTCGGGTGACTTGCAGATCAAACAGACAAGACCTTTTTAATGCCATAGGCTCG ATGTACACCGCTGTTCTCTTCCTCGGGGTCCAGAATTCTGCCTCAGTACAGCCAGTGGTAGCAGTTGAAAGAACTGTCTTTTATAGAGAAAGAGCTGCTG GAATGTATTCCGCGTTACCTTACGCAATTGCACAGGTAACAAAATCACTGGAAAAATGAACAAAGTTATTGCAAGGGATAAGATTAGCCACAGGATAAAA CATAACTGAAGATAAAATATGATAAATTCAAACTAACTAAATCCCAGCATAAAATTTTGCTTTATTAGTACCATGGTCTGTATGAGTTACCTATGTTAAC ACATGTCACTCCTTTTTTGTTTGTCACAGGTTATAATAGAGCTACCTTATGTTTTTGCCCAAGCTGTATCATATGCTGTCATAGTTTATTCCATGATTGG ATTTGAGTGGACCTTAGAGAAATTCTTTTGGTACATATTTTTCATGTATTTCACATTGTGCTACTTCACTTTCTATGGCATGATGGCTGTGGCTGTGACA CCAAATCACCATGTTGCTTCTATTGTGGCTGCTGCATTTTATGCAATTTGGAACCTCTTTTCAGGATTCGTCGTTCCACGACCCGTAAGTGTAGTCAACT AATGAATGAATTCAACCACTGAGTTATTCAATGTATATATCTATGCTGATACTTTTCTTAACAGAGGATTCCTGTGTGGTGGAGGTG BLAST |
Tissue | flowers |
Gene name | LI_gene_60262; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_200410
Blastp | Pleiotropic drug resistance protein 1 from Nicotiana with 72.5% of identity |
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Blastx | Pleiotropic drug resistance protein 1 from Nicotiana with 72.5% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (107799533) |
CantataDB | Link to cantataDB annotations (CNT0002116) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425122.1) |
Pfam | ABC-transporter extracellular N-terminal (PF14510.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |