| Id Trinity | FTRINITY_DN56453_c1_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_200159 |
| Sequence | CCGTCGTCGGCGGCCAGGTTAGTTCAATCTCTTCGTTTATCTTTTTTATTTCACTTCTAGAATGTTCTAATTCTTTCTAGAAGATAGAGAAGAATGTGCA ATTTGAAATGAGAAGTGTTGAAGAATGTAGCAATGTTATTTTGTTTTATTATTAGTGAATTGAATTTTGTTAGCTTTTAAGATGTTGTTATTTTGTGTTT CTAGAAGAAAGTGTTATTTGCATTGTGAATTTGTGTGGAATGCAGAGTTCTGGAAAATCATCGGTGTTAGAGAGCATTGTTGGACGCGATTTTCTTCCCA GGGGATCAGGGATTGTGACACGGAGGCCCTTGGTACTGCAACTGTACAAAGTAGAAGAGGGGATACAGGAGCATGCAGAATTTCTACACTTGCCAAAGAA ACGATTTACAGATTTCTCTTTGGTTCGAAAGGAAATTGAAGATGAAACTGATAGAGTGACTGGAAAATCAAATAAGATATCTCATGTTCCTATTCATCTC AGCATCTACTCCCCTTATGTTGTCAACCTAACACTGGTAGATCTGCCTGGTTTGACAAAGGTTGCTGTAGAGGGGCAGCCAGAAAGTATTGTCCAAGAGA TAGAAAGCATGATTTTCTCTTATGTTGAGAAGCCCAATTGCATAATTTTGGCCATTACTCCTGCAAATCAAGATGTAGCAACATCAGATGCGGTCAAGGT TGCGAGACAAGTTGACCCTTCAGGAGAAAGAACATTTGGAGTATTAACAAAGCTTGACTTGATGGATAAAGGAACAAATGCTTTGGATGTTCTTGAGGGA AGATCTTATCGACTTCAAAACCCTTGGGTGGGAATTGTAAACCGTTCTCAAGCAGACATCAATAGGAAAGTGGATATGACTTATGCTCGTCAAAGGGAGT CTGAGTTTTTTGCCACCAGTCCTGATTATGCACACATAGCCAATAGAATGGGCTCAGAATATCTAGCAAAGCTTCTCTCCAAGCATTTAGAGTCTGTGAT AAGATCTCGGATTCCAGGGATTGCATCTTTAATTAATAGAACCATTGAGGACCTTGAAGCAGAGATGAGACACCTTGGAAGACCAGTTGCTGTTGATGCT GGGGCACAACTTTACACTATTCTAGGATTATGCCGCAACTTTGAACGGGTATTTAAGGAGCATCTGGATGGAGGGCGACCAGGTGGCGACCAAATTTATT TAGTTTTCGATCACCAGCTTCCTACTGCATTCAGAAAGCTGCCAATGGACCGTCATTTATCGTTGCAAAATGTGAGAAAAGTGATTTCAGAGTCTGATGG GTACCAACCTCATCTAATTGCTCCAGAGCAAGGTTACCGACGACTCGTAGAGAGCTCTCTTAATTATTTCAAAGGTCCTGCACAAGCTTCTGTGGAGGCT GTTCACTTTGTACTCAAGGAACTCGTGAGAAAGTCAATTGCACAAACACAGGAATTGAAGCAATTTCCAACTCTTCAAGCTGAAATAGCAGCAGCTGCTA ATGAGGCATTAGAGAGATTTCGTGAAGACGGTAAGAAAACAACATTGCGGCTGGTGGAAATGGAGTCTGCTTACCTCACTGTTGATTTCTTCCGAAAACT GATACATGAAGCTGACAAGGGAGGGAAGAATCTAGCAGACGAATCTTCAGAGGGACACTTCCAAAGGATCGGTTCAAATGTTTTATCTTATGTAGGGATG GTGTCCAAAACACTGAGGAATACCATTCCAAAGGCCGTGGTTCACTGTCAAGTGAGGGAAGCTAAGCGATCTTTACTAGATCGTTTTTTCACACAACTGG GTGCAAAGGAGGTACAATAGAAAAATTATAAACCACCTGCCAATATAGCAAATTGTACTAATATCCACCCTATGGGAACATTTGGCATATATGAACTGGA CAAACAGTATATTTCTTCTCCTCGGTTTTCACCCCTTTCATCCAAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_60288; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_200159
| Blastp | Dynamin-related protein 1C from Arabidopsis with 73.58% of identity |
|---|---|
| Blastx | Dynamin-related protein 1E from Arabidopsis with 72.04% of identity |
| Eggnog | Dynamin family(COG0699) |
| Kegg | Link to kegg annotations (AT1G14830) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421781.1) |
| Pfam | Dynamin family (PF00350.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |