| Id Trinity | FTRINITY_DN56453_c1_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_200162 |
| Sequence | CTCGCTCAGTCGATGACCCATCACCTCCAACATTCTGCACTTTTTCAGTTCAGCAGTTTCCCCGCTCTCTCTCTTTTTTCTTCTCAAAATCAAATTAAAA AAAAAAACACAGAAACAGAAATATCATAAAACTCAAATAAAACCTATAAAAAACAAAACTATCTTCTATTTTTCTTTCTTCTTCCTTTCTCTCACAGCCT ATTTTCTCTCCTAGCTCTTTCCCTCTGCTTCGGTTTCGAATTCTCAACCGCAATAATGGATACGTTGATTGCACTCATCAATCGAATTCAACGCGCGTGT ACTGTACTCGGCGATCACGGCGGTGACGCTGTCCCTACTCTATGGGAATCTCTTCCCTCCGTCGCCGTCGTCGGCGGCCAGAGTTCTGGAAAATCATCGG TGTTAGAGAGCATTGTTGGACGCGATTTTCTTCCCAGGGGATCAGGGATTGTGACACGGAGGCCCTTGGTACTGCAACTGTACAAAGTAGAAGAGGGGAT ACAGGAGCATGCAGAATTTCTACACTTGCCAAAGAAACGATTTACAGATTTCTCTTTGGTTCGAAAGGAAATTGAAGATGAAACTGATAGAGTGACTGGA AAATCAAATAAGATATCTCATGTTCCTATTCATCTCAGCATCTACTCCCCTTATGTTGTCAACCTAACACTGGTAGATCTGCCTGGTTTGACAAAGGTTG CTGTAGAGGGGCAGCCAGAAAGTATTGTCCAAGAGATAGAAAGCATGATTTTCTCTTATGTTGAGAAGCCCAATTGCATAATTTTGGCCATTACTCCTGC AAATCAAGATGTAGCAACATCAGATGCGGTCAAGGTTGCGAGACAAGTTGACCCTTCAGGAGAAAGAACATTTGGAGTATTAACAAAGCTTGACTTGATG GATAAAGGAACAAATGCTTTGGATGTTCTTGAGGGAAGATCTTATCGACTTCAAAACCCTTGGGTGGGAATTGTAAACCGTTCTCAAGCAGACATCAATA GGAAAGTGGATATGACTTATGCTCGTCAAAGGGAGTCTGAGTTTTTTGCCACCAGTCCTGATTATGCACACATAGCCAATAGAATGGGCTCAGAATATCT AGCAAAGCTTCTCTCCAAGCATTTAGAGTCTGTGATAAGATCTCGGATTCCAGGGATTGCATCTTTAATTAATAGAACCATTGAGGACCTTGAAGCAGAG ATGAGACACCTTGGAAGACCAGTTGCTGTTGATGCTGGGGCACAACTTTACACTATTCTAGGATTATGCCGCAACTTTGAACGGGTATTTAAGGAGCATC TGGATGGAGGGCGACCAGGTGGCGACCAAATTTATTTAGTTTTCGATCACCAGCTTCCTACTGCATTCAGAAAGCTGCCAATGGACCGTCATTTATCGTT GCAAAATGTGAGAAAAGTGATTTCAGAGTCTGATGGGTACCAACCTCATCTAATTGCTCCAGAGCAAGGTTACCGACGACTCGTAGAGAGCTCTCTTAAT TATTTCAAAGGTCCTGCACAAGCTTCTGTGGAGGCTGTAAGTGCTTCTGCTTTAACTACATTATTTATCTTGTTTACTTCTGTTTCATTTGATCCAATAA GATGTAGGTGACCTCATTGGGAAATAGCTTGGTTATTGTATGGTTGACCTTGTTTTATGCTGTCTTTGAGACTAACTTAAATGCTGACTATGGACTTGGC TAACTATTGAACTTTCCTGTGCTATATGCTAATTTTGGTAGGTTCACTTTGTACTCAAGGAACTCGTGAGAAAGTCAATTGCACAAACACAGGAATTGAA GCAATTTCCAACTCTTCAAGCTGAAATAGCAGCAGCTGCTAATGAGGCATTAGAGAGATTTCGTGAAGACGGTAAGAAAACAACATTGCGGCTGGTGGAA ATGGAGTCTGCTTACCTCACTGTTGATTTCTTCCGAAAACTGATACATGAAGCTGACAAGGGAGGGAAGAATCTAGCAGACGAATCTTCAGAGGGACACT TCCAAAGGATCGGTTCAAATGTTTTATCTTATGTAGGGATGGTGTCCAAAACACTGAGGAATACCATTCCAAAGGCCGTGGTTCACTGTCAAGTGAGGGA AGCTAAGCGATCTTTACTAGATCGTTTTTTCACACAACTGGGTGCAAAGGAGACAAGGGAACTGGCACGTTTGTTAGATGAAGATTCCTCGGTGATGGAA AGAAGACAGCAATGTGCCAGGAAGCTGGAGTTATATAAGTCTGCAAGGGATGAGATTGATGCAGTTCGTTGGTCAGCATGAGAAGAAAATTGAGTGAATA TGAAGAAATTTTGGTATAAGAAGTATATATATTACAACGATAGGGTTGGTCAACATGACAATGCTACACTTATTTATATCAGTTTTCTTTGCTAACTCTG ATTTCTGATTCAGATCTCCTGTTATGTGCTGTTTTTGCCCATAACAGAGTTGGTTTTGCGTTTAAGGTTTAACTGATGCACCAGAGACCCAAAAGAAAGA CCATTTGCTACTTATTTTTAGTTTTTTGGGCACTACATACCCTACACTACCCACGCATTTAGGCTATATGTGGGTTGATTGAAAGGGGTGAAATAAGATG CATGGGAATAAATGACGTTAATTATTATATTGTTTAGATTTTTTAAATTGTGATAAAATGAAATTGGTTTTGATGGAATTTATTTCATCCAATTTCTCTT TTTCATTCTCCCAATTTGAGGGATGCAAACTGAAAATTTTATTCAGTTTAGTATTTTAAATAATAGAAGTTGTAATAGGGATGACAATAGGTACCCGGTA ATATGAGCACTTCTAATAAGTTGAGTCTAGGTTCATGTTTTTGTGTTAAGCTTGCGTAATTCTGAAGTTTCTCAAGCCCAACATCCTCATCCTCTTGCTA GCCCAAGTCCTTTTTAAGTGTTTTTCGTTTATTTCTTTTTATAGTCCTTTTTTGCAATTCTGTTAAGTTAGTTTTTGTCCAGTTTCCTTTTTTGGCAACT TTCTGTTTTTGTTGCCTTTTAGCTTCTAAGCTTTCTTTTCTTTATCTGTATATAAATTTTGGTTGCTTAGATTGTTGAACATTTATTCAATAAAGAAAGT ATCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_60288; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_200162
| Blastp | Dynamin-related protein 1E from Arabidopsis with 77.08% of identity |
|---|---|
| Blastx | Dynamin-related protein 1E from Arabidopsis with 77.12% of identity |
| Eggnog | Dynamin family(COG0699) |
| Kegg | Link to kegg annotations (AT3G60190) |
| CantataDB | Link to cantataDB annotations (CNT0000439) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421781.1) |
| Pfam | Dynamin family (PF00350.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |