| Id Trinity | FTRINITY_DN56454_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_201272 |
| Sequence | AAAACATTTTCCATACTAGAAAGCCCATTCCAGCCCATTTTCCTAAGAGAGAAGGACTCTTGAGCCAGCAAATTAGAGTTTGTAGCTGTCAGATTTCTCT TTCTCTCTCTCTTAAACACCTGTTCCAAACCACAACCATCAAATAATAACGATACCACATCATCATAAACCATACCCACTTCTCTTTCTCTGACCCTCTT CAAATTCAATGATTCTCCTGTTGTGAGAAAAAAGAGAGTTAGAGTTGTTGTTGAATGTTTGGGGCTTAAAGGCACACATATAGTATAGCAGAGAATAGAA GAAACTAGAAACTATAATAGAATGGCAGAAGTAGAGAGAAAAGAGGACTGAATGAGTTACATTCATGCATAAACTACAAGTACACTCATTTCTTCTTCAT TTGATTCCATGGCTTACCCACATTATCGATCACAGTTTGGAGACACAACGTTCACCAAAGTCTTTGTTGGAGGACTAGCTTGGGAGACTCCAACTGAAGA ACTTCGCAAATATTTCGAGCAGTTTGGAGACATTCTTGAAGCTGTCATTATTACTGATAAGAACACAGGAAAATCTAAAGGCTACGGATTCGTAACATTC CGTGATCCCGAATCAGCTAGAAGGGCTTGTTCTGATCCAAACCCAGTAATAGATGGAAGAAGAGCAAATTGTAACATTGCTTCTCTAGGAAGACCTAGAC CATCACCACCAAGAGGAAGAGGGACATTTCAAGGTGCAGCATCATATAGTGGTGTTCCGGCAGCAGGACCACCGCCAATGGCACCACCACCACCACCACT AATGTACCCACAACCATATGGCTACCCTACCTACACTCCTGATTATGGGTACCACCAAGCCACCATGTACAACCCACAGATTCAGCAAGCACAATACTAT CAAAACCTTTATGCACCATCATCTTCAACCATGGCTTCTCCATATTACTATGGTTATTCTGTGCAAGCACCTAGGGGTACATTTTCTACACCCCAAGCAA ATCGTTTACCAGCTGGGTTATCCTATATATACTACCCTACTTCACCTATTGAAGGCTCTTCTGCATTTCGAGCACCTTATCAACCAGCAACAAGGCAAAT CCCTCCTTCAACTAGTGGTAATTTAATTTAGTTTACCCTTTAATTTGCTTTTATTTTTCTTAATGATCCTATACTTTATGTTATATAGATTTTTATATAT CTTATATTTTAAACACCAACACATGGCTGCACAGAGAAAGGGAGTGAAAGAGAGAGGTGCAGAGAGGGATTTATGGATTATGATGCACTTACTGACACAC AATATATATTATGATTTGGCTGTAAAACATGTGGCCATGGGGTCCACAAGGGCAACCCAGCCCCCATGTGAATGAGCTGTCTTGGTTTTGCCATGGACCG TATAATGGGTCAATGTGTAAGAAAGTCATGACAGAGAGGGAGAGAGGGTCATCATTTAAAGTAACAGTGAATGCATGTGGTTTTCAGTAGGAATTGTTGG TGGTTAATTCTTTAACAGGTTCGGTCAAATGGTCTTGCATTCATGCATTGGCCCACATTTCTTGTTATGTTAGAGCATCCACACGCATTCAGACACTTCA ATCATGATCCTAATAGGAATGAGGTCTTAATAGGAATACCTCCCACACAATAATAAGCTAAGTGACATGATAAAAGGTCTTAAAATTTTCAGAAACTCCT AATGTGGGTACTCTTAGATACTACCATTGCTCTAGGTTTTAATTTTTGAACACGTGACTATGTGAGTGCAACTTCAGCTAGATCAATACTCATTTCTAAA CTAATATGAGAAAAAGAAAAGATTTGAATGTGAACTATTTGTTGTTGATGTTATACTACTTTATAACACGGTTGAAAATAGATTACACCTCACATGTACT TCACTCTACAAGTTTTGTATACTACTGCCTTATGAAACTGAATTTAAAGTTGTATTTATATTTTATCAAATAATGAGTCAAAGTCAAAAGTTTACTGCCC ATATATCTATTTTCACATAGCTACTGATTTCTGTCATTTCATTTTTCATTGTGTATGATAGAATCGTAAAATAATAGAGCTTGAAATTATCATTCAACAG TAATTCATAAGTATTATAAAATGTAAGCATTTAATGATGTTCGTTCGAGCTAGCACTGTTAAATGTTCACATTCTACGATGCTCGTTTCATGTGCATGGT AGAAAGTAGAATTGAAGCTAAGTGCTGTTGATTTACTTTCACATTTCATGTAAAGCGTTCTATATACGGGCACTATTGGTTCACATGAGCTTAATGCATG AGATTTGTTATGATCAATATGCACTTTATGATTTGAATGTCTAACACAATGTGATTATTATTCCTTATGGTTTGTCCTGATCAGATTCACAGACTCAGCA GCGTACCTCTTCTGAGACAGCATCTGGAGTAGTTATAACTTCAGAAAGTTCAAATACCCAAGGGAAGAGCTAAAGCTAATAAATATATATACCTGCTAAG TTTCAATTGTATAATCTTCAAATTATATTTCATCATCGCATAAATTCTTGATCTTTTTTCCACATTTATATCTTCATTTTTTGGTCCACATGCTGTAGCT TTAGCCAATAATGGTTTGCAGCAGTTTACTTGTGTTCTCCACTACTATGGCATTCAAATGTTGGACTAATCAACTTTTTTTCTTGAGGGATATTTTCTTC AATCTACTTTCCTTGTCTTCAGCGATTTTCTCTTTAATATTTTTTTAATAATTAATTATATTCCCTTTTCCTGTAAGAGGTTAAAATGCTTAATCAGTCT ATAACCGAGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_60293; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_201272
| Blastp | Probable RNA-binding protein ARP1 from Arabidopsis with 66.3% of identity |
|---|---|
| Blastx | Probable RNA-binding protein ARP1 from Arabidopsis with 66.67% of identity |
| Eggnog | RNA binding motif protein(ENOG4111PGT) |
| Kegg | Link to kegg annotations (AT3G54770) |
| CantataDB | Link to cantataDB annotations (CNT0001828) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456915.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |