Id Trinity | FTRINITY_DN56455_c0_g1_i5 |
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Name Transcript | Ll_transcript_200456 |
Sequence | ACCAACCACTGACTTGGTACAAGGTAATCTTATTTTTGTTTTCTTGTACAGATTATAAGTCAGGGAAATCGCAACAATTATATCCGAAAGAGAAACCATA CTATAAATATTTTTTCGATTCGTAATTTAGTATAACAACTATAAAATGACCTTCTTATCACAAGGTCAGCAACTGTTGTTTGCTATGCTGGTAAAGCTTT TTGCTACTAACTGATTTATTACATGTCGGATTAGACAAACTTCGATGCTCCATCAGGCACTAATCCAGTTGCGATTGACTTCACCGGGATGGGAAAAGGC GAGGCTTGGGTAAATGGAAAAAGCATTGGAAGATACTGGCCTGCATATTTCTCTTCAAATTCTGGTTGCACAGGTTCATGCAATTATAGAGGGGCTTATA GTTCATCGAAATGTCTTAAGAATTGCGGAAAACCATCACAATCACTATACCATGTGCCTCGATCGTGGTTGAAACGGAGCGGAAACATTCTTGTACTGTT TGAAGAAAAAGGAGGAGATCCAACACAAATATCTTTTGCTACAAAACAGATAGGAAGTTTGTGTGCACATGTATCTCAATCTCATCCACCATCAATAGAC TTGTGGAATTCCGACACGAAATCTGTAAGCGAAGCCGCGCCTGCTCTGTCACTAAAGTGTCCGGAACATAATCAAGTAATCTCTTCCATCAAATTTGCAA GCTATGGAACCCCTCTTGGCACTTGTGGAAACTTCTACCATGGAAACTGCAGCAGCAATAATGCTATGTCCATTGTGCAGAAGGTTTTATCTAGCCTCCT CTTTAAATTTCAACTTTATAATGTCTTTTCCCTAGTTACATTGGATTTAATTTTCATACAGTCTCAATATCAGGGAATTTCAAGTTTACATGGTACACGA CGGAGTTGTCCGAAATTTATCGAATGCTGATTTCATAATAAACATTTAAAGATAAGTACACTTGGTAGGGAGAACTTCGTCGCCCAAACCACGGCTTGAA CCTAGATTAGTCGAAGCCGGTGTCCGAATTCCCAAGGATTTATACAAAAACAAAATGTTTGACAACTCGCCGAGATTACCTTGTACTAGAAGAAAAACAA ACCCCCCATGCAAATTGAATGACAGTTTAAATTGACATGAAACCTTGTCTTTTTTTTCTTAGGTTTATACTGACATGAATGATCTTTCTTAACAGGCATG CATTGGAACAAGTAGT BLAST |
Tissue | flowers |
Gene name | LI_gene_60294; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_200456
Blastp | Beta-galactosidase 8 from Arabidopsis with 69.05% of identity |
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Blastx | Beta-galactosidase 8 from Arabidopsis with 68.72% of identity |
Eggnog | beta-galactosidase(COG1874) |
Kegg | Link to kegg annotations (AT2G28470) |
CantataDB | Link to cantataDB annotations (CNT0001217) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447890.1) |
Pfam | Galactose binding lectin domain (PF02140.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |