Id Trinity | FTRINITY_DN56458_c3_g2_i3 |
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Name Transcript | Ll_transcript_202741 |
Sequence | CTTCCTCTTCCTCTATTTTCTCTCTTCCATTCTTCTCCCTCCAAAACATTACCACACCAACTAATAATTCAACAAAATTAAAATCACACAACTTTCTCCG CCGCCATGGATCACCGGAGAATGCTAACAATGAACTGGGACGGCCTCGGCGATGACGACGAGGACGACCGTTTCTTCGACTCCTACAGTCGTCTCTCCAC GGCCGTTCCTCTTGACCTTGCCTCGTCGTCTGATGATGACGATGATGATGATGATTTTGATGACCCGCGAATGTCCTTTGTCTCTGCTGTTTCCTCTATG CCTTCTCGGAAACTAAGAGACAGGGCTGCTGTGGCTCCGGCTATGGCTATGACACCGGATTATGAGATATGGATGGCAGCCCCGGCTTCCATCACGGAAC GCCGAAAGAGATTGCTTCATGGTATGGGATTGGATGATAACAATGAATTCTTGAAAGCAAGTAGTGTTCAGCTTAGTCATGCGATTTCGAAGAAGTTTGA AGGCAATAACAATAACAAGAACAAGAACAAGAACAACAATCATGTTGTTGCATCCTCTGTTTCATCGGAGAGAAAAACAGAGCAAAAAACAGAGCATAAA ACAGAGTATAAAACAGAGCATAAGACACAGGATAAAACAGAGCATTCCTCTGTTCGGTTTGTTTTGGTTCGGTCGCGTTCCGAGGGTGACATTGATTTGT TCTCAATGGAAAAGACAAGGAAAGAGGATTTTATAGGGAAGGTGTCGAAGCAGCGCCTTACGAGGATGGCATCGGAGATAGCAGTGCCTCGGGCTAGGAT GACAGATGGGAGCAAAGTGGTTGTGAAGGATGGAAGAAATGAGGCAGGGGAGACAAAACAACATGACCGGAAGGTGTCTTCAACCGCGGGGGTGGATTCT GGAGTAGGAGCATTTGTTTTGATCAAGAATTTGGATACAGGGAAGGAATTTATTGTGAATGAGTATGGAGAAAATGGGACATGGAATAAGTTCAGTGATT TGCAGACCGGGAAAAAGTTAACAATGGAGGAGTTTGAGAAGACTGTTGGGCACTCACGCGTTGTTAATGAGCTTATGAGACGCACAAATGTCGCTGCAAG GAATGAAGGTTACTCGGGGAAACTCTCTTCGAGTTCTTACATTTCGAGGAGTTTGAGATTGAGCAAGAGAAGGGGTGCTGGATTGTTGAAGAACATAAAG GGTGTGGCAAGTGGGTTTATCGGTGATCGCGAAAGAGAGGCCCGGGTGCAGATGATGCAGCAGCAGCAGCAGCAGCAGCATGTGTTGGAGAATAAAGCTG GAAAGAATCAATGGGTAAGAGTAAGGCAAAGTGGAAAGTCGTATAAAGAGCTCTCGGCTTTGCATTTGTGTCAAGAGTTTCAGGCTCATGATGGATGCAT TTGGACCATGGAGTTTAGCTTGGATGGTCGTTATCTTGCAAGTGCAGGAGAGGATAAGGTGATTCATGTGTGGGAAGTGCAAGAATGTGAGGTTATGTCG TTGAGGCCGGAGGAAGGAAATCTTACTCCTATTCATCCCTCATTGCTTGCTTGCTCCGACCGGAACGGCCATGCTGAGGGTCCACCATTGTTTAGTGAGA AGAAGAAGAGAAGCAAATTTGGAAGCAAAAGAGGGAACACGGTTCCGGAATATGTTCATGTGCCTGAAACTGTGTTTTCCCTTTCTGAGAAACCATATTG CTCTTTCCAAGGTCATTTGAATGATGTTTTGGATTTGGCTTGGTCTAAATCTCAGCTACTTCTCTCTTCTTCAATGGACAAAATAGTGAGATTATGGGAC TTGGACACTAAGACTTGCTTGAAGATGTTTGCTCATAATGACTATGTGACTTGCATACAATTCAATCCTATTGATGATGATTATTTCATAAGTGGTTCCC TTGATGCTAAAGTCAGAATATGGAACATTCCGGAACGTCATGTCGTGGATTGGACTGATACACATGAAATGGTTACTGCAGTTTCTTATTCACCTGATGG TCAATGTGCCCTTGTTGGTACTCATAAAGGAGGTTGCAGGACCTATAGCACTGAAGATTGCAAATTAAGCCAAACGGGAACAATCGAGATTCGACACAAG AAAAAATCTCAACTAAGAAAAGTTACTGGTTTCCAGTTTGCCCCGGGAAATCCATCGGAAGTGCTTGTTACTTCAGCGGATTCGAGGATAAGAATTTTGA GTGGTTCAGAAGTTGTTCATAAGTTTAGAGGTTTTCGAAATGCAAACAGCCAAATTGCAGCTTCATTTAGTCCAGATGGAAGATATATTATTAGTGCAAG TGAAGATTCTCAAGTATATGTTTGGAAGCATGAAGAACATAGAAGTGCAGGATCCGGG BLAST |
Tissue | flowers |
Gene name | LI_gene_60323; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_202741
Blastp | WD repeat-containing protein 44 from Bos with 31.2% of identity |
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Blastx | WD repeat-containing protein 44 from Bos with 38.7% of identity |
Eggnog | WD repeatcontaining protein(ENOG410XQPJ) |
Kegg | Link to kegg annotations (286825) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448589.1) |
Pfam | WD domain, G-beta repeat (PF00400.31) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |