| Id Trinity | FTRINITY_DN56461_c3_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_200476 |
| Sequence | ACTTTAAAAAGAACCATTTTTTTTAAGAAATCACTTTCTTAAAAATAGCTTTTTAATTTTTTAAGACATACTTTTAAAAAAATGGTTTTTGAACCTTAAA AAAATATGTTTTTCAACACTTTACAAGAATGCAATGTTTAAAGACTTTGTTTGTAAAGTTTTTAACAAATCTTTAAATATATTGTGTATGTAAGAACAAT TTTTATTATTAATTACATTTATATGTTCTATCATGGATCTCACCATCATCCAAACAAAAATATTACTAAACATATAGGTTTGTAGGAGAATTTAATTTAA TAAAAAATCAATGTGAGAGTGAGAATTAAAAATCAATAAAATGAGTAGTTTGACCAAACTACTAACATGTTTATTGATATACTTATGTGACTTATAGCCA CATCAACATTTAGCTCATATTCCTCAATGATGATAAATTAAACCAATTTTTTTTTCAACATTTAAGGACTAATCACAATTAAAGTAACTTCTATGAATTA AAAATTAAAATGCATTAAATTTTAAGAGACCAGATAAAATTGACATAATGCTAACTCACCCAACTTTAGATGAGTGGTAAGGTTGAAGTGGCATTCCTCT AATCACATCAAAGGAGAGACACAAAACCAAAACCAAAACCTTTCATTATAATAACTAAAACCAAAATTTCCCAACATTTAAGGACTACTCACGTCACTTC AGAATTCAGATGAGTGGCAAGGTTGATGTGGCATTCCTCTGATCAATCAACGCTTAGCCAAGATACACAAACGTGTGAGACCAATACCAAAATCTTTCAA TATTAAGGACTAGTCATCATTATAAGAAGTAAAACAAAAATATGTTGAATATAAAGAGATCCCACTTCTGCATGAAATTATCTTGAATCTAGATCTTTTG ACTTAACTTAATCCAATCCCTTATCACCTTGAATCGGTTAAAATAGGTAGAAGTTATTATTTTTGTGGAGGATTAGATCCAATATTACACACCGCTGTTT AGCTATTTCAATTGTTGATAGCGAAATTTATATGACTCTTTGTTGCATGGAGAAGGAGGATGATTTGATGTTAAGAAGATTCCTGCGTTTCCGTGATTTA GATATTGAGAAGGCTTCAACTATGTTTCTTAAGTACTTGAAATGGAGACATTCATTTGTTCCCAATGGTTCTATATCTCAGCAAGAGATTCTTAATGAAC TCGCACATGATAAGGTATTTGCACAAGGACATGATAAGAGTGGTCGACCTATAGCTATTTTCTGTGGTGCAAAACATTTTCAGAACAAAAATGGTCTGGA AGAATTCAAACGGTTTGTAGTATATGCTTTTGATAAATTATGTGCAAGCATGCCACCAGGGCAAGAAAAGTTCTTTGTTATAGGAGATCTTAAGGGATGG AAATATTCAAACTGTGACGTGCGAGGATACATTTGTGCTCTAAACATTTTGCAGTTGAGTGGATAGACAAAATGGGCGACCGAGTGAAGAGGAGCCTGTT GCGCGCTGCCGATAAATCGAAGAAGGACGGTGCTTCGTCGAAGCTCCAGAAGGTGGCGCCCACAGCTGCCCCCCACGGCGAGGGATCCCCCCAAGGCCAT GAGTGGGAATGGATCCACGCCTCGGGCGGTTGGATTTACCAGACAAGGGGGCGAAGACCGGCCCCTTGGGTAGTTTTTGAAGACCACGAGTGGGAATGGA TCCTCGATTTGGGCGGTTGGATTTACTAGTCAAGAGGGGCGAAGACCGACCCATTGGGTAATTTTTGAAGACCACGAGTGGGAATGGATCCACGCTTCGG ACGGTTGGATTTACTAGTCAAGAGGGGCGAAGACCGACCCATTGGGTAATTTTTGAAGACCACGAGTGGGAATGGATCCACGCTTCGGACGGTTGGATTT AACAGACAATGGAGGCGAAGATCGGCCCCTTGGGTGAGATTTAAAACCTTCAAAACAAAACATGAATAATACATCGTTATTATATATATAAATTGAAAAG ATTACAAGGGGGACGACCAACCGCGAATGGAGCTGACGTCTAGGTATAAAATAAACGAAGATTGGTGGCGTTCCACGTCATTGGGATTTCTCGTCCATCC ATGTCTTGAAGCTTGTATACTCCATTCCCAATCTTGCAGGCTACATGGTACGACCCTTCCCAGTTTGGCCCCAACTTGCCTTTCACCTTGCCTATATCTG CCCTCCTTAGGACTAAAGTCCATTCATTAAATTGGCGGGGGACAACTGAAGAATTGTATTTCGCCGTTGTTTTCTGCTTGATGGTTGCCTCCCTTAGTCG AGTCTTTTCTCTGACTTCTTCCACCTCATCAAGATTGTTCCTTAAAAGGGATTGATTACTTTCTTCATTGAATTGCACAGTCCGCCACGTGGGTTCTCCT ATCTCAACCAGGATCATAGCCTCAGAGCCATATGTTAAGTTGAAAGGTGACTCCCCGGTTGTGGAGTGTGGGGTGGTGCGATATGCCGATAGCACATGAT GAACGTGGTCTGGCCAGTTTCCTTTTGACTCATCGAGTCTCTTTTTGATCCCCTTCAAGATGACTTTGTTAGCTGCCTCAGCCTGACCCTTAGTTTGAGG ATGCTCCACTGATGTGAAACGTTGTTTGATGCGAAGACCTGATAACAACTCTTGGAAGCGTCGGTCGGTGAATTGCGTACCGTTATCAATGACTATGGTG GAAGGGATGCCAAAACGAGTTATTATATTCCGTCAAGTGAACTTCTGGATGTTTGTTGATGTGATGGTGACCAGTGCCTCTGCCTCAATCCACTTGGAGA AGTAGTCAATGGCGACAATTAGGAACTTCAGCTGTCCAGTTGCTTGGGGGAATGGTCCCAGGATGTCCTTGCCCCGCCCCGCCTGTAGAAAGGCCAGGGC GATTGTGTAGTTGTTAACTCTTCTGGGGGGCTTTGTGGAAGTCAGCAAAGAGTTGGCAACGGGTGTACTTCCGAGTGAGAGTTGTTGCGTCCTTTTCTAT AGTTGGTCAGTAATACCTGACGCTTAAGACCTTCTTGGCGAGAGATGTCGCGCCCAAATGGTGTCCACAACTCCCTTCATGAATTTCCCTGAGGACGTAG TCCGCCCGTTCTGGTCCAAGGCATTTGAGGAGGGGAGTTGAGAATCCTCGCCTGTACAGGGTTCCTTGTATCAATGTATACCCTGCACAACATCTAAGGA ACCTCTGCTTGTCCTTCGGGTCAGCTGGTAGGCTGCCATGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_60349; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_200476
| Blastp | CRAL-TRIO domain-containing protein C3H8.02 from Schizosaccharomyces with 27.13% of identity |
|---|---|
| Blastx | Pol polyprotein from Gammaretrovirus with 26.94% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (SPAC3H8.02) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432977.1) |
| Pfam | CRAL/TRIO domain (PF00650.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |