Ll_transcript_201041

Id TrinityFTRINITY_DN56462_c2_g3_i3
Name TranscriptLl_transcript_201041
SequenceTATTACTTCATTCCTTATTTATTTATTGCAAGTTGGAAAAGGCATGAGTATGAGAAGGCGGTAGAATTTGTGCGAAAGCCTCCAAAGCAGACTTTGACAG TGAAAGAAAGAGAAAATCAGAAGAAGAAGAAGATGAGTGATACTGTGTGGGAGGGTGTAATAGAGTTCACGAAGTGGGCCCAATCAAAAAACACAGACCC AGTGTTATGGGCGGTTGAACTGAGCTCAACCCTGACCTCCGCCGCCGTAAGTCTACCATCGACGGAGCTCTCACGGCGGCTGGTATCACACATATGTTGG GATAATCACGTGCCTATCACGTGGAAGTTTCTTGATGCAGCTATCTCTCTAAACATCGTTCCTCCTTTCCTCGTTCTCTCTCTCCTCTCCACGCGCGTGT TCCCCAAACGCCATCTTCACCCTTCCGCTTTCACTCTCTTCCTCTCTCTCCTTAAACGCCACCTCCTTTTCTCTCTCTCTTCTTCTTCTAACATCAATTC CCCGAATTACCCTCACATCATGGAATCTGTTCATCACGCGCTTCACCTTTCCGATCTCGATCCTGAACCTGGTGTTGTGCTTGTTTGGTTCTTGTTTACC ATTCTCTCTTGGCTTCTAGAAGCTTCCTTGGACGATGAAGGATTACTCGAACACAAGCCTACGTGGCTCCACCATGATGATGATGATGATGATGGTGATG ATGTCATTATGTCTGAGCCTGAGAACGAGGCTCTGTTGAGGAAGAATACAGGAATGACTATTGAGCTCATTGCATTGTTTCTTCAAAACAAACTCACATC AAGAATCCTTTCCTTGCTTCATAAAAACATGCCAACACATTGGGAAACTTTTGTTCACCAACTACAGCGACTTGCCGCAAATTCGTTAGTTTTGAGGAGT TTGAAAAATGTTACTCCCGAGTCTCTTTTGTCGTTTACTATCAAGTCCGATGGGCTGAAGCTGTTGTCTTCTCAATGGAAAACAACACATAAGCTGGAGC TTAATGCAGTCATGGCTGCCGGTGCTGCCTCTCAGATATCGTGTGCACTTCAAACTCATGATGATAGCTGGTCTTTGCTTTGGCTTCCCATTGATCTTAT CCTTGAAGATGCAATGAATGGTGATCATGTTGCCGAAACTAGTGCTGTTGAAGTTCTTACCGGGTTGGTGAAATCTTTACAAGCAGTTAATGGTACTGCA TGGCACAATGCATTTTTAGGCTTATGGATGGCAGCACTGAGACTAGTTCAAAGGGAGAGGGATCCAAGTGAAGGTCCTGTACCTCGCCTAGATACCTGCT TGTGTATGTTATTGTGCATTACAACCCTCGTGGTCGCTAATATTATCGAAGAAGAGGAAGGTGAATTGATCGTAGAAGCTGAGCGTAGCCCTACAAATCA AAGGAAGGACAAACCTGCCTTGGGAGAGCGTCGAGGGGAATTGGTTATCAGCTTACAGCTATTGGGTGATTATGAGGGCTTACTGAATCCGCCTCAACCT GTTACTTGGGTAGCCAATCAGGCTGCTGCCAAGGCTGTTATGTTCGTATCAGGTCATGCTGTTGGTAATGGATACTTGGAGAGTATGAATGTGAATGACT TACCCACGAACTACTCTGGTAACTTGTGGCATCTGATTGTTGAGGCTTGTATTGCAAGACATCTGCTTGATACTTCAGCTTATTTTTGGCCTGGTTATGT CAGTGCACCTTGCAATCAAATACCTCATAGCATTCCTAACCACCTGCCTAGCTGGTCATCATTGATGAAGGGATCACCACTAACTCCTCCATTGGTTAAT GTCTTAGCCGCAACTCCTGCTTCTAGCTTAGCAGAGATGGAGAAAATATTTGAATTTGCAATCAATGGCTCTGATGAAGAAAAGATATCTGCTGCTACCA TACTTTGTGGGGCATCTCTAGTACGTGGTTGGAATGTACAGGAACACATCATTTTTTTCATGATAAAGTTGCTCTCACCTCCGGTTCCTCCAAAATACTC TGGTACTGAAAGCCATTTGATTAGCTATGCTCCACTTTTGAATGTCCTTCTTGTTGGAATTTCACCTGTAGATTGTGTTCAGATATTCTCTCTACATGGT GCGGTTCCATTACTTGCAGCTGTGCTAATGCCAATATGTGAGGCTTTTGGATCATGTCTTCCTAACGTCTCATGGACTGCTGCAACAGGAGAAAAACTCT CTTGCCATGCAGTATTCTCTAATGCATTTATTCTCCTGCTGAGATTATGGCGGTTCAATCATCCACCTCTTGACCATGTGATGGGGGGTGCTGCAACTCC AGCATTAGGATCACAGTTAGGTCCTGAGTACCTTTTGTTGGTTCGGAATTGTATGTTAGCGTCCTTTGGGAAATTACCGAGATTCGTAGTAAGCAGTAGA AGATTTTCAAAAATGATTAGTTTTTCTACAGATCCCATATTTATGGATTCCTTTCCAAAATTGAACATTTGGTATCGCCAACATCAAGAATGTATTGCAT CAACTCGCTCTGCTCTTGCACCTGGAGGCTCTGTTCTTCAGATTGTTGATGCACTACTAAGCATGATGTGCAAGAAAATAAGTAGAAGTTCTCAGGCATT GACACCTACAACTTCAGGAAGCAGCACTTCTTCTGGTTCTTCATTGGATGATGCTATGATGAAACTCAAAGTGCCTGCATGGGATATCCTCGAAGCAGCT CCATTTGTTCTTGATGCTGCTCTTACAGCTTGTGCTCATGGAAGGCTCTCTCCCCGTGAATTGGCTACAGGTCTCAAAGATCTTGCTGATTTTCTTCCGG CAACTTTGGGTACCATCGTAAGCTACCTATCAGCTGAAGTAACACGTGGCATATGGAAGCCAGCTTTTATGAATGGAACTGATTGGCCTAGCCCTGCTGC AAATTTATCAACTGTTGAGCAACAAATCAAGAAAATTCTAGCAGCCACAGGTGTTGACGTCCCAAGCCTTGCTATAGATGGGAATGCGCCAGCCACACTT CCTTTGCCCTTGGCAGCTTTTCTAAGTCTCACAATAACGTATAAACTGGACAAATCTGCTGAGCGCTACCTTATCTTGACTGGCCCAAGTTTGATTACAC TTGCTGCTGGCTGTCCCTGGCCATGCATGCCGATTGTAGGTTCTTTGTGGGCTCAGAAGGTGAAGCGTTGGAGTGACTTTTTCGTATTCAAAGCTTCCGG AACAGTCTTCAACCACAGCAGGGATGCTGTAGTTCAGCTCCTAAATAGTTGCTTCACATCCACCCTTGGCCTTGGTTCTTCCTGCATTTATAACAATGGT GGTGTTGGTGCACTCCTTGGTCACGGGTTTGGTTCTCACTTCTCCGGTGGGATCTCTCCTGTAGCACCGGGGATTCTCTACTTAAGAGTTTACAGGTCTA TTAGAGATGTTATGTTCTTGACAGAAGAAATTGTATCCCTTTTAATGCTTTCAGTTAGAGATATAGCAAGTAGTGAGTTACCCAAGGCCAAAGGGGATGT AAAGAAAACTAAGCATGGTATGAAAAATGGACAATTTTCTCTTGCAAGATCCATGCAACATGTAAAGCATGCTGCTCTACTTGGGGCTTCATTACTTTGG ATATCTGGTGGACCAAAGTTGGTTCAATCATTGATGAAAGAGACTTTGCCTTCCTGGTTTTTATCAACTAATATGTTGGAGCTGGATGGTGGAGAATCTG GAGTTTTGGTTGCTATGCTTAGAGGTTATGCACTAGCATACTTTGCTATATTTAGTGGGACATTTGCATGGGGCATTGACCATTCTTTTATATGTTCGAA ACGACGGGCAAAGGTTCTCAGCAGGCATGTGAAATTTCTTGCAAGCACCCTGGACAAGGAGATATCACTTCGTTGTCATTGTGCTACTTGGAGAGCTTAC GTGACAGGTTTTGTGAGCTTGATGGTGGCTTGCACTCCATTGTGGGTCCCTGAAGTTGATGCTGATACATTGAAGAGACTTAGCAGGGGATTAATAAGGT TCAATGAATATCAGTTGGCTTTTCGCCTTTTGGAACTTGGAGGGATACCTGTCATGGCTGCTGCGGCTGAAATGATAATTGAACTTCAACACACATTTTA AATCTTTTTACAACTAGGAACTACTTACTATATTCATTTCTTTACCTTTTTTCTTTAAGTGTAAGGGATGAAGATATCCCATTCAAAAACGGATGATCAT GTTAGATAGATCTTTTCACTTGATTGAAACTTATATTAATGCTACTTTTAATATGTGTTGATAGGATATATAAGATAATGGATGAATATGAACTAATTAA CATGATAAGCACAAGAATCCTTCAAATTTAAGCACTTGATTTAGTGAATATGTGATGTTTCCAAAACTGTATTTTAATTTTTTTAGTAAATGAAATTGTG CTCTACCTACATATTAGAAGAATTCGTTACTTTTTTTTAATATCTACTTGCATCGTAGAGATAAAATGCACTCTAAAACTACAGCAGTCTTGTGCCACAT GATTAGAAAACCGTAGTTAGAATAATAGGAAGCGCTAGATTAATTGTTATGGTTGTTTTTAAGCATGTTAGGAAAAGAGGGGAATTGCTAAGATTCTGGA TTTTTGGTTAACATGTTAAGTTAAGATGATGACTTTTGTGGAATTTTTATCAGTGTTCATGTCCAAGTCCAACTCATATCGCTGAACCACAAATTCAAAA AATAATCAAATTAAAAAAAAGAGAGAGTCAGGGTAGTCTATATACAATGGGTTGAGTCTAAAATTAGAAAAAAAGAGTGAGAAAATAGGATCAAACAAGA GGTTTCACATCTTCAGAAGAACAAAAAAATGGGTGCTTCACAATCAGTCTCAACCCAATCCATTCATGAATTCACTGTCAAGGATGCAAAGGGCAAAGAC GTTAGCCTCAGGATCTATGAGGGGAAAATTCTCCTTGTTGTTAATGTTGCTTCAAAATGTGGATTTACGAATTCCAATTACACCCAATTGACTGATCTCT ACAACAAATACAAGGACAGAGGTTTTGAAATATTGGCATTTCCGTGCAACCAGTTTTTGAAGCAAGAGCCTGGGAGTAGCCAGCAGACACAGGAATTTGC CTGTACCAGATACAAGGCCGAGTATCCCATTTTTGGAAAGATACAAGTCAATGGGCAAGATGCAGCACCTGTCTACAAATTTCTTAAAGCACAGAAACCT GGATTTCTGGGGTCTAGTATA BLAST
Tissueflowers
Gene nameLI_gene_60366; 
Additional informationdetails; 

Expression of Ll_transcript_201041

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_201041

BlastpMediator of RNA polymerase II transcription subunit 33A from Arabidopsis with 55.84% of identity
BlastxMediator of RNA polymerase II transcription subunit 33A from Arabidopsis with 54.74% of identity
EggnogComponent of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the repression of phenylpropanoid biosynthesis. May compete with MED33B for common binding partners or for occupancy in Mediator(ENOG410XPER)
KeggLink to kegg annotations (AT3G23590)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019442503.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;