Id Trinity | FTRINITY_DN56463_c2_g1_i2 |
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Name Transcript | Ll_transcript_202698 |
Sequence | GTTAAATCTCTGAATTTGTTCAATTTTTATGTTTACATTCTCTGCATATTTGTTTCTTCTTCCCACAGTTTTGTAATCCATGTTTTTGACCTATCTCTTT CTCTGTCTTCATTTTCCTGTCTATGCTTATGGCCCTCACACACTTTGGCTCTCTCTACAATGTAAAGGTTTCATTGTTCTAATGAGTTGGTTTTGTTCTG TGATTCCTTCTTTTTAGAATATTAACAGCTAAGCATACCCAACCACTTTTTATTGTTCTGGCCTTTCTTCAAAACTCAGTTATTCTTGTGTTTTCTATCT TCTTTACCATTGGCCACTTCTCTTTTCACCACCTCATTTTGTCTCTTAGCTTTCTCTCTCTCACACTCTCTTCTGTGTTTTTTATTATTAGCATTAAAAA AACTTCCCAAAGAGGTTTTCCCCCTATCATTAACATATATATCTTTATGAATAATGATTTAATGGAGACTTTTATGTCTGAGGTCAACATGAGTAGCTTC TCTCATTACATGGATGATGAATATGAGAAACTCTTCCGGAGAGTGAACCCTCCCAGAGTTGTAATTGATAATGAATCCTGCAAGAATGCCACTGTTATAA GGGTTGATAGTGCAAACAAGTATGGGATACTTCTTGAAGTTGTACAAATTCTCACTGATCTAAATCTCACCATAACTAAGGCTTATATTTCTTCAGATGG TGGATGGTTCATGGATGTTTTTAATGTTACTGGCCAAGATGGAAACAAAGTTACAGATGAGGCTATTCTGGATTACATTGCAAAGTCTCTTGGTCCTGAA TCTTGTGTGACATCTCCAATGAGATCTATTGGGATGAAACAAACAATGGACTACACTGCAATAGAGCTATTAGGGAGTGATAGGCCAGGGCTTCTTTCAG AAGTGAGTGCTGTTCTAACAAACCTCAAGTGCAACATATTGAATGCCGAGGTGTGGACTCACAATGCGCGTGCCGCGGCTGTGATGCATGTAAGTGAAGA AACAGGATCTGCTATCATTGACCCTCAGAAGCTATCTTTAATAAAGGAGCTTCTATGCAATGTGCTTGGTGGTGGGAACAAGAATAGGGGTGCAAAAACT GTTGTCACTGATGAAGTCACACACACTGAGAGAAGGCTTCATCAAATGTTGTTTGCCGATAGGGATTACGACAGAGTTAATGATGATGACTTTGATGAGA AGCAAAGACCAAATGTGAATGTTGTGAATTGGTTTGACAAGGATTACTCTGTGGTTACTATCCAATCTAAGGATAGACCAAAGCTTTTATTCGATACAGT TTGTACTTTGACAGACATGCAGTATGTAGTTTTTCATGCAAATATCGATGCCGAGGGGCCTGAAGCATATCAGGAATATTACATCAGACATATAGATGGT TCTCCTGTAAAATCAGATGCAGAAAGACAAAGAGTGATTCAATGTCTTGAAGCTGCAATTGAAAGAAGAGTTTCTGAGGGATTGAAGCTAGAACTCTGCA CTACAGACAGAGTTGGACTACTATCCGATGTCACGCGAATCTTTAGAGAAAACAGCCTTGCAGTTACGAGAGCAGAAGTGACCACTAAAGCCGAGAAAGC GATTAATACGTTCTATGTTCGAGGAGCTTCGGGTTGCATTGTCGATTCGAAGACCATAGAAACGATTCGCCAAGCAATAGGCAACACTATACTTCAAGTA AAGGGTTGTACTAATGAATCAAAATCTGTTCCTCGGGATTCTCCAACAAGATCCCTCTTTAGTGGTATTTTCAAGTCAAGATCATTTGTTAATTTCGGAT TGGTTAAGTCTTATTCTTGAAAAAGGGCATCATATATGATGTTACTTGCTCTCTTTAGTATACAAAAACCTTACTAGAGGAATTATTATGACTTTAGTTT AGGGAGTGTAGGAACACACTTAGCCAGCATATTTTAGCTTGATGAAGTGTAGGGAAAGTTAATTTGTAAATTCTCAATTCCTTCTGCTTTAGCTTTAGTT TGCTTCTCCATGGTTTCAATCATGAGATGGAGTGATGTAACCAAATTAGAATCTTAATTGATTAGCCTTGTAACTAATGTTTCAAGGGTCATCATTTGTA TATAAAATTTCTCAAGTACACGTTTAATTTTCTAGGAGCATTTATATCATTCTAATATGCTCACATTACAATTATGTTTCTAATTATACACATTATATGT ATAAAGAATTATACCCATTATCTATTTGTATTATTTTTGTTTAAGAGTCAATGTTTAAATAATAATGGC BLAST |
Tissue | flowers |
Gene name | LI_gene_60374; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_202698
Blastp | ACT domain-containing protein ACR4 from Arabidopsis with 73.33% of identity |
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Blastx | ACT domain-containing protein ACR4 from Arabidopsis with 71.56% of identity |
Eggnog | ACT domain(ENOG410Y95G) |
Kegg | Link to kegg annotations (AT1G69040) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019433429.1) |
Pfam | ACT domain (PF01842.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |