| Id Trinity | FTRINITY_DN56468_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_201433 |
| Sequence | ATCTTCTTCTCTTTCTCTCTTCTATCTTTCTCTTCTTCACCTTTTCTCTTTCTTCTCAAAATCGCCGATGATAGAATCAGATCTTCACGATTTATCCGAC GACGCCGATTACGCTGCGTCTCTTCAACAAGGGTCTGCGAGCGTGATGGTGAGTAGCGACAGTACTAAGCAGGATTCGTTCAGTGAGCTTGATGCCGATG AGATTGTATTTTTGAAGGATAATGTAGCAATTCATCCTACTCAGTTTGCTTCTGAAAGAATCAGTGGCAGAATGAAGTTGACTAAGCAAAGTTCTTCCTT GTTTATGACTTGGATACCTTACAAATCACATAGCTATGATGGGAAGCTCTCTGACAAAGATAGAAGCCTTTACACTATAAAGGCAGTGCCATTTAATGAT ATCAGGTCCATCCGGAGGCATACTCCAGCACTTGGGTGGCAATATATCATCGTTGTTCTGTCAACAGGACTTGCTTATCCTCCATTATACTTCTATAGTG GAGGAGTCAAAGAATTCCTTGCTACAATAAAGCAACATGTTCTTCTTGTGAGATCTTCAGAAGATGCAAATGTATTCCTTGTGAATGATTTTCAGAATAC TCTGCAGAGAACTTTGTCTTCTTTGGAGCTACCCAGGGCTGTTACTGTGGCATGTGAACCTTCAAACTTGTCAGGCGATGAATCCACTATGAACGAGAAT GAAGAGCAAGCTGATGGTGGTGTCAATAATGGAATTGTTAGTGCTTCTCCGTTTCACGGTAGGCCAAGACATAAAGGTCATGATCCAGCTCGGGACATTT CTATTCAAGTTTTAGAGAAGTTCTCTCTTGTGACAAAATTTGCCCGTGAAACAACTTCACAACTCTTTGGAGAAAACCAGAGTAATGGATTTAGTTCCAG TAAGAGGAGAACCCAAGTCCAGACTAACCTTGATCATCCTATTGTTGAAGGAAATGTTCCTGAAGAAGGTCATGTCATCGCAGATCCTCTGGAGGTAGTT CCTTCTACTTTGGTGCCAATATTGTAAATGTTAGTATTATTATCTGCAAGAAAACTGTTTTTATTGACAGAGTTGTTTTGATTCGAAACATTTGATGCTT ACTTTTTTGGCATCTTTTACCCTGAAGGCTGGACTATATATTATATATGTATTTATGTATGTATATTAGAGAGAGATAGAAGTGTTTGCACTGACAGGGT AAAGTATGTGTGGGTCCTTTGCATGTGTGTGTGTATATATAATACTCTGAAGATAGTTAACATCAGTTTTACCACCAATGATGAGTATGGTAGTGAGTTT GGTGAAGATCTTTAGTTTATTTTCATTTATGGATGGTGGGTGCTTAGGTAATATTATTTTCGTACCGTAGTTGTTTTCAGAATTTGTCCTGCTGTGATGC ACAGCATGAACACAATCAGCTCTCCTAAAGTTTATTCTTCTATCATCTCTGCATTTATGCTGTAAGCCTGTAAAAGTGTAAAGTCAGTATTGGGTACTGA TCTTTATGCTAATTGCATAGATGTGGATGGACAATTAAGTATACAGGAAGTCTAGTTGGTTATACTTCTGATACTTAATTTGATGTGTGTTGGATGCCCT TATTAAGCTTCTGGATTATTTTATTGCTACTAGGTCTTCATCTGCTGATGTAGGAGAAGAAAAGAGCAAGGTACACAAAGGTGGGAAAGGCTCCCTCTTA AATAGCAAGGGGGTTGTATTTCCTTGAGGGGAGAGGCACTGATAAGCGCATACTTCACTGAAGAAAAAAGTGATGAGATATTTCATATTTGGGATTTTTG CATTAATTTTCATATAAATTAACTACTCATATTTAACATACATCAGTAAAAAGAAAATAAGTTAAAACATCGATTTACAAAATCCAGTCTCCTAGATTGA CAAATAGGTTTTTAATTTTCTGACTCTTTTACCCTCTTTAGCTTCTCAATTAGCAAGCTTGTGACATGCTGTGCTGAACATTCATTTTTGTATATAAAAT GTGTGCATAATGCAATTGTGGAAAGTACTAGATTTGTTCAAGGTACACTGATTGCATAGAAAATAGCCTGATACGCCATTTGGCTTGTACGCATTGTGCC TTGGTGACATCTACCAAATTGCGTTACTATGATCATTCAACTTGTGTATGAAAGGGTGTTAGCTAGAAGATAATATATTAGCCAGGTAATGTCATCCAGT CAATTAGCACTTGTTGAAGACCAGGATAGAGTAGAAGATTTGTAATGAAAAGTTTCTCTGTACTTGCTCTTTAATTATTACAACCCTTTTTTTACTTCGA CTTTGGGCTGGCTTTGTAAGCCTAGTAGTCATGAATAATCTGGCTGTTATGGATGGAGGCAATAACATATTTGCTGTGTATAATCTGCTCATATTTTCAA AATTGTTAAAGTGACTTGTTTCTTCTCTCAGTCCCTTTTACAACGTACATGATAAATTATTAATGATATCCTCTTTCATTTCTCCTCTCGCAGTTTGATA AATTATCACTTGTGTGGGGAAAACTGCGGCAGCCCCCTTTAGGTTTTAGAGAGTGGATTACCTTCTTGGATTCTGAAGGGCGAGTCACTAATTCAGAAGC TTTGCGACAGAGAATATTTTATGGTGGACTGGACCACAATTTACGAAAAGAGGTTTGGGGTTTGCTTTTGGGGTACTATTCATATGAATCTACATATGCT GGGAGAGAACTCCTGAAGTCAGTTAAAAAGTCAGAGTATGAGACCATAAAGAACCAGTGGCAGAGTATCTCCTTGTCACAAGCTAAAAGATTCACAAAAT TCAGGGAAAGGAAATGCCTTATTGAGAAAGACGTGGTTCGAACTGATAGATCGCTCGCTTTCTATGTTGGGGATGATAATCCAAATGTAAATGTTTTGCG AGATATCCTGTTGACCTATTCATTCTACAACTTTGATCTTGGTTATTGTCAGGGAGGAGTATCTTGATAACTATTATTTTTCTGAACCAAACTACAGTCT GAAATGATGAATCATCCTCTCCATTAATTGTTTTCATATACCGTCTTCTCTCCTTCATCCTATCCAAAAAATGGGTAACAGCTGTGCATTGTTGTCTCAT GGTTAGGGAATTTATATGCTGCTGTTTTACAGGGAATGAGTGATCTTCTGTCTCCAATATTGTTTGTGATGGGTGACGAGTCAGAGGCATTTTGGTGTTT TGTTGCTCTGATGGAACGTCTTGGACCCAATTTTAATCGTGACCAAAATGGCATGCACTCTCAGCTTTTTGCATTATCGAAGTTGGTGGAGCTTCTGGAT AGTCCATTGCATAACTATTTCAAGGAGGGTGACTGCTTAAATTATTTCTTTTGTTTCCGCTGGATTTTGATTCAATTTAAAAGGTTAGATTCCTTCAAAA GCTACAATTGACATAGTTCAATTTGAGTTGTTATGAATGTAGGATGACATAATATCAATATTGTGGTGTTTGTATGCTGTTTAATGTTTGGCTGTGCCAT CAAATTGGTTCTGTTAGAGATGATATGTTTGGAGGTTCCATTTTATGTTTGTCTCAAAATCTGGCAGTGTTAGCCTCAATTGGAGTTATATTTATATACT TATTTAGACAAGTAATGGAAATTTCAGGGAGTTTGAGTACGAAGATACAATGCGGTTGTGGGAAGTATTATGGACGTATTATCTGTCAGAACATATGCAC CTGTATATATGTGTAGCAATCTTGAAACGGCACCGTAACAAAATAATGGGAGAGGAAATGGACTTCGACACTCTTTTGAAGTTCATAAATGAGCTAAGCG GTCACATTGAACTTAATGCAACTCTCAGGGATGCAGAGGCTCTATGCATTTGTGCTGGTGAAAACGGAGCAGCTACTATACCACCTGGTACCCCACCTTC TTTACCTGTTGATGATGGTTCCTTTTACGTGCAACAAGATGAAGTTTTGTAAATAATTTCACTCCTCTCATAATTTAGCACTATGCTATTCTGTATTTTT ATATTTCATGTTCTCACTAAAATCCCTTGTTAGCATATTAAATGCATTACTTAAACATATACCATGTTATTTATTATTTTTTGTTAACTTCCTACATTTT ATTGTTTTTCGTATAAAAAAGAGATATTAGTTTTATA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_60416; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_201433
| Blastp | TBC1 domain family member 17 from Homo with 34.33% of identity |
|---|---|
| Blastx | TBC1 domain family member 15 from Mus with 49.65% of identity |
| Eggnog | TBC1 domain family member(COG5210) |
| Kegg | Link to kegg annotations (79735) |
| CantataDB | Link to cantataDB annotations (CNT0000874) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452646.1) |
| Pfam | Domain of unknown function (DUF3548) (PF12068.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |