| Id Trinity | FTRINITY_DN56471_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_200062 |
| Sequence | CATTAATTGACCTTACACAGCTGTCTCTTAACCCATTCTCAACTTAATTTAGTGGTCACGCATATTCCACATCAAAAATACCTTCAATATTCTCATGCAT TCGCTTCCACACTAAACTCTCATTCTAGCTTCTAAAATCACACACGTCATCGTTTTCCTCAAATCTGATTTACGCAGAACACAAAACGACCGTGCAACCT ACCGCAACATATAAATCCACTTTCCACGTGAACTAACTCTACTTAATACGACATCGTTTCGAAACCGCCGAGTTTTAAAAACGACGTCGCTGAAACGTGA CAGAAAGAAAACCCCTTGTTTGAAACGTGGGAGAAGATATTCTATATACCCATTTAGATTCCTTCTTCTTCTGATAGTAAAGTTTCGTGCTTTGGAAACG TTTCATTGTTATAAGAGGTTCAATTTTGTTGTTGAGAAAGTGGTGAAAGGGAAGGTGGAAATGCAAACAGAGGCTAGGGTTGGTGTGGCGGTGGACGGAG GAGTAAGGAAGTTGGTGCAGCCGCAGAAGAAGCAGGTTGGTACTGTTTCTCAGCTTCTCGCCGGCGGTGTTGCCGGCGCTCTTAGCAAAACCTGTACGGC GCCGCTTGCTAGGCTCACTATCCTCTTTCAGATTCAAGGTATGCATTCAAATGTTGCAACTTTGAGAAAAGCCAGCATGTGGAATGAGGCTTCGCGAATT ATCCATGAAGAGGGGTTTAGAGCTTTCTGGAAAGGGAATCTGGTTACTATTGCTCACCGCCTGCCTTATTCTTCTGTTAATTTTTATTCATACGAGCACT ACAAGAAGGTTAGTGGCATTACTACTCGGGATATATTTATTTCTGTTAAACTATCTTACCGGGAAAGCTGCATTTGAAGGCAGTCAAGGCACTATTGTTC TCAGATTGATTTATATTTAATAGCAGTTTATCTGTTGTGTAGTTATTAAAGATGGTTCCAGGATTGAAAAGTCATAGGGATAAGGCCAGTTCAGACCTTT GCGTACATTTTGTTGGTGGTGGCTTGGCTGGAATAACTGCTTCTACATCTACTTATCCCTTGGATCTTGTAAGAACGAGGCTTGCTGCCCAGGTGAGATT TTTTTTGTCATCCTTTTCTCTTTTTGACTCCATGCATTTGGCATCCGTTTTGTTCTAGCTTTGGTGAGCACTGTTATCTGAGATTTTGTGCTTGCACTGA CTTCCAGGTTAACTTAATTTTGCCCCTCCTGATTATAATTAGTTGCATAATTAGTCTTTTATGTGTTTTTAGTTTCTTAGAGGCTTGGACCCTTCCATGA CTCTCCCACCTTGAATATGTCTTCTTTTGAAATCTTATCCACGAGAATGTTTGCTTAAATTTGGTGAACTGTTTATGCACAGTTGTGGTTACTGGTTATA TATATTCTCGCATTCATATTCTGCCTATTAACAATTAGCTATGTTAATATTTTCCAGGGAAATGTTATCTACTATAGAGGTATCTGGCATGCTCTACAAA CAATTGTCAGGGAAGAGGGAGTGCTTGGCCTTTATAAGGGTCTCGGAACTACACTATTGGTATGCTGTTATTATCAATTTAAAATTACATGAAAAGTAGA TGATTTCTTTATTGTGTAATTAGCTGCAACTATGGTGCTAGTGCAGACTGTCGGGCCAAGTATAGCAATCAGCTTCTCGGTATATGAAACATTAAGATCC TTTTGGCAGTCTCATAGGTGACCAGTCCCCAAGTTATTTCAGCACTCTATTACGTCTAAATTTTCCTTATATCATGTACTTCATAGCTAGCATCAGATTG ATATTATTATCTGTATATATCAGATCCGACGATTCAACAGTTGTTGTCAGTCTAGCCTGCGGCAGCCTTTCAGGCATTGCATCATCAACAAGTGAGTGGT TGTAAGGCGTATAGAGAACTTGCATTTTTTATGTTCCTTGTCTCAAATATTCTCGATAATTTTAACTTTGATGTGCCTTGTCAGGTAAGTAAGTATTCTT GATATGTTGGACATGTGATTTACTTGCCATACAAATGTTTTTTTTTGGCAATTCACAGTTTCACACTTATGGTGTTTCTTGCAATTGTTGTTATGAATAT TCTGTTGGTAATTTTACCCTGTTCCTGCATCTGTGGCATCGGAGCACTCAATTTAGGGCTGTCGTATCAAATGTTTACTAAATGTGCAAATTACAGTTTG GAATCCTTCAGACAAACTATTGAATTTGCTGAACCCAACAACACTAATGAAGTCAATGTCTGTAGTGCTTCACTATGCTTTTTGATGCAGAGAAAGAGGG TTTGGTGCAGGTACTGTACCAACTATCTAACCAGACTGACCTCTAGAATCAGAGGCGAGGTTGGAGTTGTTATTTTATCTGGCATTGAGAGCTTAGTAAG GAAGACAAGAAAAAAAAGTCCTTCACCTGTTGTTTCTGTAACTATTATTTTCTAAAGATCTTGCACAGATTTTCTCGAGTTTTATACTATGACACGTCTC CCCAAGCTATGCAGTGGATTACCTCACGAGGTAGCATTACTTGGATGAACCTGTGTCATTCTCTCAGTTACCAAATGTGAGAGGTGCCCTCTTTGAGGTA TGCTTCTCACTTAGGCGACCTTCACCTGTTGTTTCGATCGGTATCCAAATCCTTTGGCCCTTGTTGATCTGTTTACAGGGAATCTATTCTTTATTGCTTT CATCATATTCCTAAATGATGGAAAATGCGGTAGCAAAATAGTAGTATGCTGAGGATAGAAGTAAAGAATAATTCTAAATTCTCCTAGCCAGTCCTCATAC AAATCTTTCTACTTACTAAATAAAAAAAGTATGGAATACTTCTTTATTCGCAAAACATTGGATTCGTTACCTTTTCGTTAAATACTTTATTTAGTATTGG GAGAAATTTTAGGATATAGCAAAACACATTATAAATGGGTAGATGAAATCGCCAATTTATAACAAAGGAAAGAGCTGGAGATATTTTCATGGGAGAAAAA CCAAATATTATTGATCAGGGGGATTGATCTTTCTTGTATCAAAACTTTATTATATAGACACTAACTACCTTTCTCTAAAGTATTCATGCGTGCAAAACCC TAGTAGCCCATTCATCAATTGCTTCATGCAACTTTTGTACCACCATGCTACAGCAATTACATGTTCAAGTAAGGTTGTTATTGCTTTGCATCTTTCCAGT GCCAATTTTTTTAATGCTTCCATGAGAAGATCCCCCCATAGTTCCTATAATATGTTTGCTGGGGCTATTCTTTAGAGTAGCTTATATAATGTTGCAGGCT TGCAATTTTGTCTGAGACACAGAATCGGCACTATAAGAAACTCTTCTTTTGGTTGCATGGCTTACTTGTTTCAAATGTGGTTACTTTTTTATTTCAACAT TGATTTTGGAATTGGTTTGACTTTAGTTGATTTTTCACTATTAGAATTTATGATAGGTAATGAAGACTTATGAACTGTTGTGTAATAAAATCCCATGTCA AAGTGAATCTCTTTTGACTGTTCAACTGATCTGCTATCCTTTATGCAGCAACATTTCCCTTGGATCTTGTGAGGCGGCGAAAGCAATTGGAAGGGGCTTG TGGGCGAGCCCATGTGTATAACATGGGTCTCTTCGGTGTGTTTAGGCAAATAATTCGGACAGAAGGTGTACGTGGCCTATACAGAGGAATTTTGCCTGAA TACTACAAAGTGGTGCCAGGTGTTGGTATTTGTTTTATGACTTATGAGACACTGAAGATGCTTTTAGCAGATATTGGTTCTGCATAATTACACCCATCAA CTTTGGAGTATGATCTACAACTTCAAGTAATTTGGATTAAGTTATTTACCCATGCAAATGGGTTAGAGTTACATTTACCAATTGGTTTCAATTTTGCAAT GCTACAAGAGGATTGCATTTTTCACTTGTACAGAGTCTTACACATACAACATTTAATATTAGGCTGTAGTGGGTCTTGTACTCGTGATCTGGTCTATCTT TTGCTATCAGTCTGAGAAAGAAAACAAGGAAGTGTTAATCTGCAACTGAGCCTCAAGGAAAAAGCTTTTCAGAGGGAATCGTTCAATATATCTATGTCTG ATCTTCATCAGCAAGTGGAGCTAAAGGCTTTGTGGTTGTAGTGCTGTCCAGCACTGCTGTGTTTCTCTTAAGAGAAGTTATCTTTTGAGAAGTGACTTGT ATTAATGACAGTTACATGAGTACTTTAGATACCTTGTTTTTGTCATTTTAGATGTGGATTGATTTTCCATTGTCCAAGATTTAGAACTTGGCATTTTATA ATTTCATTATCAAAAACTCTTGATTTGTTATGCAGTCTTACCACGAGTTTTTATTAAAAAGGGAATTTCCATTCTTTAGAGAATATTTTCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_60431; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_200062
| Blastp | Calcium-binding mitochondrial carrier protein SCaMC-1 from Homo with 37.62% of identity |
|---|---|
| Blastx | Mitochondrial substrate carrier family protein B from Dictyostelium with 51.39% of identity |
| Eggnog | Solute carrier family 25 (Mitochondrial carrier(ENOG410XQ4P) |
| Kegg | Link to kegg annotations (29957) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433219.1) |
| Pfam | Mitochondrial carrier protein (PF00153.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |