Id Trinity | FTRINITY_DN56484_c1_g1_i5 |
---|---|
Name Transcript | Ll_transcript_201821 |
Sequence | CTATAACACTCTGCAAACTTTCCAACTGTGGAATCTTGTCCTGTATTTTTCTTCCCAGTTGGCAACAAATGCAATAATTCTCTGTTTTTTTTTTCTTTCC AAAAGCAACACTTATTTTATTCACATCAAACTAAGGGAAGTAGAAAGAAAGAAGAGATAAAAAATCATAATAAGGTGCCACTCTTTTTTCTAACTTTATT TGTTTTCCTTCATAAGCTTCACAACTTGTTGCACTAAATAATCCTGAAATTTGATTCTATGTATTAAACAGATTCTGCAGAATGATAAATCAGAAGTTTG TACTTGAAACTGAAGCTAGCTTCAGCAATAATGATGCTAAATCTGAGAGTGTACAAGGCAAGAAGAAACTGAAGAAAGTGAGGTCAATAAGGCTTGTAAA GTGTTCAAGCATGAAGTCATCCATTAGAGAAAAAAATTCTCAACATGAGAATCTTTTCATATCAGATGCATCACCAAATTATATGAAGGGTACTAGTAGT TCTCATGCAAAGGAGAGTTTTCAGATTACACAACCACTTTCCACAAAGAAGAGTTTAACAAGAGTGTATACTTTGAAACTGAAGAAAAATGTGACCAGAA AGAGTGAAGTTAAGAAGAAACTTAAGTCTTCAAGATCAATAAAGATTGCAACTTTCAAAAGCCAAAACTCAACAAGTAAGAAATCTGAATATGAATCTGA TTCCAGTACTAGTTATATACAGCCACAATCAACATATGTTGGTAACAAATCTCAGAGAGTTATCACTAGAAGATTGAGCTTGAAGCCTGTGAGGTTCTTA GCAAAAATGCCTACTTTTAAATCAAAGAATGATTCAGTTTTGCATAAAGCTACTTGCTCTTCAACTCTCAAGGATTCTCATTTCCCTAATCACATTGAAA TTCCACAAGAGGAAAGTGGTTCTCAAGGAGTACCAGCTATAAGGGTTTGTCCATATACTTATTGTTCTCTTCATGGTAACCGACACGGTGATTTGCCTCC ACTGAAGCGCTTTGTTTCGATGAGGAGGCGTCAATCGAGGACACAAAAGAGTACCAAAATGGACGATTCTGATAGATCTGTTACTAGATCGAAGCAGACC GGTAATTCAAGGAAGGCCACTCAGCAAAGTCGATCTGTCCAGAATGGAAAAAAGCTGGCCAGCGACTCGGGTATTAGGCCTCATGACACTCCAAAGACTG CAGTTACTGACGGTGGCACTTTCGGGGGAGAGGATGAAGAAATGCACAAGTTCAGATGTGATACCGAGGTGTTTCCGAATATGACTAACTTTGAGCAGGA TCTCAGTAATTCTTTGGCAGTAAAAGGCTACATTTCGCCTGCTATCAAAGACACAAATATGAAAAGTTGCTGTGTTGCCACTGAAAAAGATAAATCCGAT TCCAAGGTCACTGAGTCAGCGAATGACAAGAATATAGCTGCAAGCAAGAAAAATGATGAAAATGCTATTGTGGAATCAACATCAGTAGATCTTCTCAAGT CTTCGGCTTCTGATATCGAGATATTGGAGGAAGAGGCAACTACCAAAGGCTATGAAGTAACGCAGACTAGTTCTGCGCTGAAAGAGCCTGAGCCTGTTCA CGATACTGATGTGACATACAAGACACAGGAAAGAGATCAGAAATATATAAAGAAGTGGCACTTGATGTATAAGCATGCAATATTAAGTATCACAGGGAAA GAAAATCACAAGCTTCCTTTTAATGGAAGGGACAATGAAGGAAGAGGGCAAGATTCTCACACACTTAATGTAGGAAACGGATCTTCTTGTCGTGATTATT GTGAAACAGATAAGGATGTGGATGATGAAAATGAGAATGTAATTGAACAGATGCAGAAAGCATTTGATGAAATTCTTCTCCAAGAACCTGAAGGCCTCTT TTATGATGACGATTCCAAATCTAGCGGCACCGGTTCGGATGAGGTATTCTTAGAAAAGAGTGAAGGTAATGGAGGGAAACTATACACTCCAGCATCCAGA GAATCTCCTAAAGAAGAAACATGGCCAAAATTTGACGATTTCGGAAGTCAAGTTGAAGAAATAACAGCACAGAAGATAGGAGCCAAAGCTGAACAAAAAA CACCAAAAAGATGGAGCAATCTGAAAAAGTTAATCCTGTTGAGAAGGTTTGTGAAGGCCTTAGAGAAGGTTAGAAACTTCAACCTACAAAGACCAAGGCA TTTGCCTTCAGAGGCTAGCTTCGAAGCAGAAAAAGTATTTCTCAAGCACCAAACAGCAGAGGAGAAAAAGAACGCTGAGGAATGGATGCTTGACTATGCA CTTCGAACGGTTATTTCTAGACTTGAACCTGCTCAAAGACAAAAAGTGGCACTTCTAGCAGAAGCTTTTGAAACAATTCTGCCATTTCAAGATGCTGAAA ATGGGCTGCAGTCTTTGGCAACAAAGAAAACTCGAGAAAATCCAACTCTATCGCTGGACGATTCCTCATATGATAGCAAGGAAGAAACAGACGAAGGAAA GGATTGTGGATATTCTTCTACTATATTGCTTAGAAAAGCATTATCTTCTCATAATACTGTTATGGAATTTGTGGATAATGCTAGTGATGATCCAATGCCT GAGCTGCACGATCCTACGGTGTTTAAAGAAAGATGTGTTGACAATACTGAGCCGGAGACGGTCAAGGATATGCCTGTATCTGAAGCTGTTGATGAAGATT TGACTGGAAATGATAACATTCATCTTGCAGAGATCAAAGATTCCAGGTCATGGTCCTTAAGTAGAGCGCCCGAAATTGTAGGCAGCTGCAATGAGGAGGC TACAATCAGTGAAATAGTCGATGAAGTCCCAGATGATTTGGAATCAACTTCGAATACGGAAATTCCAAATAGCAAACCTGAGTCACCTGGAAGAGATTTT GAAACCAAGAAGTTGATTGGTGCTGATACGGAACAACTTTCTTTGACAAAAAGTTTAATACTGAAAGGTCTTCCCAGATTGCTCGGATCTAATGTCGTTG GTTCAGGAGCACCTTCGGATCAATTAGATGAACCAACAGCAGACAGAAAAGAAAGGATTGAAAAGGCCAGGCTGGAAACTGAGACACTAGAAGGGTTCGC TAAACCTGGCCAATCAAGAGCTCCTAAGAGTGCAGATGTTGCAGAACCTGAGACTGATATAGAGAAACACAAGTTGTGGTACTTGGTTTATAAGCACATG GTATCAGATACTGCTGAAGATGATCCCGGAACGCTAGTTGATGGGGCAGAGGAGAAAGAATCCGGGAATGAAGGCGGTATAATAAGAGGAACTTCTGTCT CTTATGATAGTACACCTGTGAGGAATGAAAATTTGCAATCACAAGGTCATGGTGTAGCTAACCAAGAAGTTGAACTACAGCAGCTTGAAGCCATCAAGAT GGTAGAAGACGCGATTGATTCGATCCCTTCGGATGTTCAGGACGACTTAACAGACAGACAGTCACTTGATGACAACATAATTTCCGACGAATGCTCCAAA CAATCCAACAAAACTGAAAGAGTGTCTGGTGAAGGCCTGAACCAAAAAGAAGAGAAAATGGAATTAGAAAATGAAATAACCGAAGAACGAGAACAAGAAC AAGAAGAGACAGCATCAAAGGAGGGAAACAAATCAAACAAACAATTGTCTAAAAGCTGGAGCAATCTTAGAAAAGTTGTCCTGCTAAGGAGATTCATCAA GGCATTGGAAAAAGTAAGGAAATTCAATCCAAGAGGACCAAGATACCTACCAATAGAACCCGATTCGGAAGCTGAAAAAGTTAACTTAAGGAGTCAAGAC ATGTTAGAGAGAAAAGGCACAGAAGAATGGATGCTTGATTATGCGCTTCAACGGGTTGTTTCAAGATTAACTCCAGAAAGGAAAAGAAAAGTAGGGCTGC TAGTGGAAGCTTTTGAAACAGTCATGCCAAACTTCAAAAACTGAAACTGGAAAAATAGCATAATAGTTTTGTGTCCATACTCCAGAGTACATTCAAGCCA AACAAGCTGAAAGGTAAAAAAAATACCCTCTTCAAGTACAAAACTTCAATTCTTTTCAATTTACTCTTGCTTCTTTTTTCTTCTTAACAATGTAAAGCTT GTCAAAGTCTAACCATGTAAAATCAAGAAAATACTTGGGACACTTTTATACTCTTGTCATATGTTCAAAGAGAAAAACACTATACCAGTTTTATATAATG TCACTGCATCATCGAGTATTCATGTTCAATTACAGAAAAGGAAGAGTCCAATATGGATCAACATTCAACAGTGAATACATTTATGCATTTTGATTTGCAT TTTGGCACTGTCTTAAGAAATCTAATCCACCCGTTTTCATCTATATGTGCAGGTTAATAAGAACATGTATTTGATCACAGTCCTTTTGATTTGAGTTTGC AATTTTTAGTGTCACAACATTGCATGGGACCTTGGATTTTTCAATGTTTTATAGGGCAACTTTACAAGATAGGGAATGAATGTGATTCAGAAATAATAGA AGCTTGAAACATGGCACAGTTTCCTTTTCACTTTTTTCTTCCTTCCCATTCTTTTACATTCATATTATTACTGGTGTTAGGAGTTTGATGTTTTGTATGA AATTCCTATGTGCTACAAATAATGTATACAATTTTATATGTATCGTGATATTATATATTTTATTTGGGTACAAAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_60517; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_201821
Blastp | - |
---|---|
Blastx | - |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444018.1) |
Pfam | Plant calmodulin-binding domain (PF07839.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |