| Id Trinity | FTRINITY_DN56488_c4_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_202360 |
| Sequence | AACTAAACTACATTTTCTGGTTTCATTCAAATAGGTTGCACCTGCGAACCACTCCATCTTTCTATGGAAGTTAATAAAATATAATCTTGTAATAAAAATG AACGTGAATGTTTAAAATTAAATTATTATTTTATGAAAAGTAAAATGTAAAGACATGAATTGAAAAAAAGGGTGTGGACAGAAAAGGGGAAACGAATTGG AGGGAAATCTCGGAGCGGAGGAAAGAGAGAGAACGATGCCGGTCGCGAGGCGAGAGACGTCAGATTGTAGAGTCATCGGTCATGTAGATATGGACTGCTT CTACGTTCAAGTGGAACAGAGAAAGGAACCAAAACTAAGGGGTGTACCCACTGCAGTAGTACAGTACAACTCATACAAAGGTGGTGGCTTGATTGCAGTT AGCTACGAGGCTCGTGCACATGGTGTTAAGCGCTCAATGCGGGGCGATGAAGCAAAGGAGGCATGCCCACAAATTCAACTCGTCCAAGTTCCGGTTGCAC GCGGTAAAGCTGATCTCAATACATACAGGAGTGCAGGTTCAGAGGTTGTTTCTATTCTTTCACGGAAGGGTCGTTGTGAGAGGGCTTCAATTGATGAGGT GTATCTTGACCTTACTGATGCTGCTGAAGCAATGTTTATGGAAACTCCTCCAGAAAGCATGGAAGATATTCAGGAGGAGGTTACCAAGTCTCATGTTTTG GGGCTTCAATTTGAGGATGGAAATGACCCCAAAGAAGAAGTTAGAAAGTGGCTTTGTAGGAGTGATGCTAGTTATCAAGACAAGCTATTAGCTTGTGCTG CTTTCATTATTGCTGACCTCAGGATGCAGGTGTTGAAAGAGACGGAATTCACATGTTCTGCTGGCATTGCTCATAATAAGATGCTGGCTAAACTTGCTAG TGCTATGAACAAACCTGCACAACAAACTGTTGTGCCACACTCATCTGTTGCAGGTTTGCTTGAGTCTTTGCCAATAAAGAAAATGAAACAGCTTGGGGGA AAATTGGGAAGTTCCTTACAAAGTGATCTTGGTGTGAATACTGTTGGTGATCTGCTTCAGTTTTCAGAAGAGAAGCTACAACAACGTTATGGGATCAATA CCGGTACTTGGTTGTGGAATATTGCGAGAGGAATCAGTGGGGAAGAAGTTGAGGGGCGACTACTTCCCAAGAGTCATGGTTCTGGCAAGACATTTCCTGG GCCTCAGACTTTGAAGACAATTGGTTCTGTTCAGCATTGGATAAATGAACTGTGTGAAGAGCTGAGTGAACGCCTTCATTCTGACTTAGAGCAAAACAAA CGGATTGCACACACACTCACTCTCCATGCTAGAGCATATAAGACGGGCGTTCCAAATTCAAATAGAAAGTTCCCTTCTAAATCATGTCCTCTAAGATATG GGACTATAAAGATTCAAGAGGATGCTTTAACTCTATTTCAAGCTGCATTACGTGAATTTATGGGCTTTTATAACAGTAAGACTAATTGGAACGAAAATAA CAAGTGGGGGATAACGTCACTTTCTGTTTCTGCAAGTAAGATTGTCCCCATACCATCTGGGACGCATTCTATTGTTAAATACTTTGGTGGGCAAACTCCA TCTGGTTCTTCATTGAATCAGCCACTAGATAATGTCATCGATGAAGCTGTGCCACCGTCATCTTCAGGTACCGAAAATTGTTTGGGATTGATTCTCTGTG AATTACCAGTCAGATATCCTGAAGAAGACACAGCAATGAAGCATTCACAGGATTGTGTGGATCAACAGGATCCATTGTGCAATTTGTCCTCGAAAGTAGA TGGCTTGACTGAAGAATCCTCACTCATCTCACCTACAGGAAGTGAAGACCGGAGAAAACAGAGTGAAGAACATAGAGATTTGCCTGCAAAAAAACCTAGG GTTGTTTTAAATACATCCAGTCTTAAAGCAGTTGAGAAGAGAAAGAGAGAAGGAAAGAAGCTTCAAGGGAATTGTTCAATTACAAAATTCTTCAATAATT ATCCAAACTCTCAGTCTTCATTGGAGCAAAAGAATGTTACAAATGCTCAAGGATCTCGGTCTGCTAGGGGTAGTTATTTAACTTCCGATGAAGTTGAAGT TGAGATGTCAGCTGCGAGCAGTCATGGCGATATTGTTAAAAACGTTGCTGGATGTAGTGCAGCTAATATTCCTCATGGAAGACAAGCTTGGAGTTATAAC ATTGATGAGATCGACCCCTCTATTATTCGGGAATTGCCTCCAGAAATCCAGGAAGAGATACAAACCTGGCTTCAACCTCAAAAGCGGCCTAATGTGGTCA AACGAGGTTCTAGTATTACTAATTATTTCTTGCCTGACAATAGTAGATGATATGGTTAGTGACTTTGGTCTAATGTACATATTTTATGATGTTAACTTGA TTGAGATTGATATGGACTCAGCCTAAGGAACTTAGTTGTGTGTTATGATGTTCCTCGTGGAAGAGTTGTGTAAATATGCATGCTTATCATTATTTCCTAC AGAGTTCAGAATAATTTGCTATTTTCTTCTTTTTGGGATGTTCTAGAAGGATAGTTCTGTGATATCTTCTAATGAACTCTTTTGTCCCAAAAAGATTGTA TTAAATAACCATAAATGATGTCTCATTTGTTTTAGCTTGGAAAATTGTCTTTGATTTTGACTTAATACATAGCTTTGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_60556; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_202360
| Blastp | DNA polymerase eta from Arabidopsis with 58.18% of identity |
|---|---|
| Blastx | DNA polymerase eta from Arabidopsis with 58.18% of identity |
| Eggnog | Poorly processive error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by polIV. Exhibits no 3-5 exonuclease (proofreading) activity. May be involved in translesional synthesis in conjunction with the beta clamp from polIII (By similarity)(COG0389) |
| Kegg | Link to kegg annotations (AT5G44740) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459921.1) |
| Pfam | impB/mucB/samB family (PF00817.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |