Ll_transcript_202371

Id TrinityFTRINITY_DN56488_c4_g1_i9
Name TranscriptLl_transcript_202371
SequenceAACTAAACTACATTTTCTGGTTTCATTCAAATAGGTTGCACCTGCGAACCACTCCATCTTTCTATGGAAGTTAATAAAATATAATCTTGTAATAAAAATG AACGTGAATGTTTAAAATTAAATTATTATTTTATGAAAAGTAAAATGTAAAGACATGAATTGAAAAAAAGGGTGTGGACAGAAAAGGGGAAACGAATTGG AGGGAAATCTCGGAGCGGAGGAAAGAGAGAGAACGATGCCGGTCGCGAGGCGAGAGACGTCAGATTGTAGAGTCATCGGTCATGTAGATATGGACTGCTT CTACGTTCAAGTGGAACAGAGAAAGGAACCAAAACTAAGGGGTGTACCCACTGCAGTAGTACAGTACAACTCATACAAAGGTGGTGGCTTGATTGCAGTT AGCTACGAGGCTCGTGCACATGGTGTTAAGCGCTCAATGCGGGGCGATGAAGCAAAGGAGGCATGCCCACAAATTCAACTCGTCCAAGTTCCGGTTGCAC GCGGTAAAGCTGATCTCAATACATACAGGAGTGCAGGTTCAGAGGTTGTTTCTATTCTTTCACGGAAGGGTCGTTGTGAGAGGGCTTCAATTGATGAGGT GTATCTTGACCTTACTGATGCTGCTGAAGCAATGTTTATGGAAACTCCTCCAGAAAGCATGGAAGATATTCAGGAGGAGGTTACCAAGTCTCATGTTTTG GGGCTTCAATTTGAGGATGGAAATGACCCCAAAGAAGAAGTTAGAAAGTGGCTTTGTAGGAGTGATGCTAGTTATCAAGACAAGCTATTAGCTTGTGCTG CTTTCATTATTGCTGACCTCAGGATGCAGGTGTTGAAAGAGACGGAATTCACATGTTCTGCTGGCATTGCTCATAATAAGATGCTGGCTAAACTTGCTAG TGCTATGAACAAACCTGCACAACAAACTGTTGTGCCACACTCATCTGTTGCAGGTTTGCTTGAGTCTTTGCCAATAAAGAAAATGAAACAGCTTGGGGGA AAATTGGGAAGTTCCTTACAAAGTGATCTTGGTGTGAATACTGTTGGTGATCTGCTTCAGTTTTCAGAAGAGAAGCTACAACAACGTTATGGGATCAATA CCGGTACTTGGTTGTGGAATATTGCGAGAGGAATCAGTGGGGAAGAAGTTGAGGGGCGACTACTTCCCAAGAGTCATGGTTCTGGCAAGACATTTCCTGG GCCTCAGACTTTGAAGACAATTGGTTCTGTTCAGCATTGGATAAATGAACTGTGTGAAGAGCTGAGTGAACGCCTTCATTCTGACTTAGAGCAAAACAAA CGGATTGCACACACACTCACTCTCCATGCTAGAGCATATAAGACGGGCGTTCCAAATTCAAATAGAAAGTTCCCTTCTAAATCATGTCCTCTAAGATATG GGACTATAAAGATTCAAGAGGATGCTTTAACTCTATTTCAAGCTGCATTACGTGAATTTATGGGCTTTTATAACAGTAAGACTAATTGGAACGAAAATAA CAAGTGGGGGATAACGTCACTTTCTGTTTCTGCAAGTAAGATTGTCCCCATACCATCTGGGACGCATTCTATTGTTAAATACTTTGGTGGGCAAACTCCA TCTGGTTCTTCATTGAATCAGCCACTAGATAATGTCATCGATGAAGCTGTGCCACCGTCATCTTCAGGTACCGAAAATTGTTTGGGATTGATTCTCTGTG AATTACCAGTCAGATATCCTGAAGAAGACACAGCAATGAAGCATTCACAGGATTGTGTGGATCAACAGGATCCATTGTGCAATTTGTCCTCGAAAGTAGA TGGCTTGACTGAAGAATCCTCACTCATCTCACCTACAGGAAGTGAAGACCGGAGAAAACAGAGTGAAGAACATAGAGATTTGCCTGCAAAAAAACCTAGG GTTGTTTTAAATACATCCAGTCTTAAAGCAGTTGAGAAGAGAAAGAGAGAAGGAAAGAAGCTTCAAGGGAATTGTTCAATTACAAAATTCTTCAATAATT ATCCAAACTCTCAGTCTTCATTGGAGCAAAAGAATGTTACAAATGCTCAAGGTACTAAAATATCATCATCACTTAGTAATTTTTTATTCCATTTCCTTTC ATTATACTTGTGCAATCCCATCTCTGTTATTCCTACATCATAAAAAGTGCAGGATCTCGGTCTGCTAGGGGTAGTTATTTAACTTCCGATGAAGTTGAAG TTGAGATGTCAGCTGCGAGCAGTCATGGCGATATTGTTAAAAACGTTGCTGGATGTAGTGCAGCTAATATTCCTCATGGAAGACAAGCTTGGAGTTATAA CATTGATGAGATCGACCCCTCTATTATTCGGGAATTGCCTCCAGAAATCCAGGAAGAGATACAAACCTGGCTTCAACCTCAAAAGCGGCCTAATGTGGTC AAACGAGGTTCTAGTATTACTAATTATTTCTTGCCTGACAATAGTAGATGATATGGTTAGTGACTTTGGTCTAATGTACATATTTTATGATGTTAACTTG ATTGAGATTGATATGGACTCAGCCTAAGGAACTTAGTTGTGTGTTATGATGTTCCTCGTGGAAGAGTTGTGTAAATATGCATGCTTATCATTATTTCCTA CAGAGTTCAGAATAATTTGCTATTTTCTTCTTTTTGGGATGTTCTAGAAGGATAGTTCTGTGATATCTTCTAATGAACTCTTTTGTCCCAAAAAGATTGT ATTAAATAACCATAAATGATGTCTCATTTGTTTTAGCTTGGAAAATTGTCTTTGATTTTGACTTAATACATAGCTTTGT BLAST
Tissueflowers
Gene nameLI_gene_60556; 
Additional informationdetails; 

Expression of Ll_transcript_202371

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_202371

BlastpDNA polymerase eta from Arabidopsis with 62.12% of identity
BlastxDNA polymerase eta from Arabidopsis with 62.52% of identity
EggnogPoorly processive error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by polIV. Exhibits no 3-5 exonuclease (proofreading) activity. May be involved in translesional synthesis in conjunction with the beta clamp from polIII (By similarity)(COG0389)
KeggLink to kegg annotations (AT5G44740)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019459921.1)
PfamimpB/mucB/samB family (PF00817.19)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;