| Id Trinity | FTRINITY_DN56524_c0_g5_i3 |
|---|---|
| Name Transcript | Ll_transcript_154248 |
| Sequence | TGACAGTGTCAACAAACACACACTGTTTGGTTTGTTAGACATTTTTCTTTTTCAACTACCCACTTTGCATGAATCATCTTCAACTCTAAATTTACAATTT TTCTTTCACATTTCCAATCCAATTCAATGCAATCCATGGCTTCCTCTCACTTTCTCTGCATTAACAATGTCTTCCCCATTTCTCCAAATCCCTACAGAAC CATCCATTTCCCTCAATTCACACCACTTGGGTCATCAAATTTTCACACTAAGCTTCACTTTCAGAGACCCAAGATTGTTAAAGCAATGATTTCTGATTCC AACCTTTCCAAGAAACAAGTAGAGGTTGTGTATAACCCTGATGAAAGGATAAACAAATTGGCTGATGAAGTGGATAAGGAAGCTCCCCTTTCAAGGCTTA CTTTGTTCTCTCCCTGCAAGATAAATGTTTTCTTGCGAATAACCGACAAGAGGGAAGATGGGTACCATGATTTGGCATCTCTATTTCATGTGATAAGTCT AGGTGACATAATTAAGTTCTCTTTGTCACCATCCAAGACCACCGATCGACTGTCAACCAATGTGTCCGGGGTGCCGCTTGATGATAGAAATTTGATTATT AAGGCGCTTAATCTTTACAGGAAGAAAACTGGCAGTGAAAACTTCTTCTGGATTCATCTCGATAAACGGGTGCCTACAGGGGCAGGGCTTGGTGGTGGAA GTAGCAATGCTGCAACTGCACTATGGGCAGCTAATCAATTCAGTGGCGGTCTTGCCACCGAGAAAGAACTCCAAGAGTGGTCAAGTGAGATTGGATCAGA TATTCCCTTCTTTTTCTCTCAGGGAGCAGCCTATTGCACTGGTCGAGGTGAGGTTGTTGAGAATATTCCTCCTCCAATATCTTTGGACCTTCCAATGGTT CTCATAAAGCCCCAACAAGCATGTTCAACTGCCGAAGTCTACAAGCGTCTAAAGTTGAACAAGGGCAGTAACATTGATCCTTTAACATTATTGGAGAAAA TCAAAAGGGATGGGATATCACAAGATGTCTGTATTAATGATTTAGGTATGTTTCTAGTTGAAAGTCCATAGCTTTTACTTTTTTTATTTTTCACTCTGGC TTTGATTTGATATTCCTTGATGCCCCATTATTAGTTTTGCAAATCAATCCTTCCTAACCTTGACAAAGACAAACTTTTTGTGATTTGATCCTGATTCACC TGTTCAACATTTGGCCCCTATCCACTTGGGCTTGACCATTAAAATGCATTAGTTTTTATATGATTTTTTCTGTGTTTTTCTTTTTTTTTCATCCACAGAA CCTCCAGCATTTGAAGTTCTTCCATCTCTCAAACGACTGAAGCAACGGATTACTGCAGCTGGTCGCGGAGAATATGATGCTGTTTTTATGTCAGGAAGTG GAAGCACTATTGTCGGAGTTGGTTCGCCTGATCCTCCTCAATTTGTTTACGATGATGCCGAATACCGAGATGTATTTCTGTCAGATGCCTATTTTCTTAC TCGAGAGGAGAATCAGTGGTACAAAGAACCTGCATCAACTCCTTCTGCCTCTTCTTTTGATTCTGAGTCTGCATAATTCATTGTCTTGTAATAAGATTAT ATGATATTTAATGCAATAATATATCTTTATTTTGTCTTTTTTTTGTCTCCATTATTATTGATACGAGAAGATGATGACTTTAGCGCAATGGTAAGTTTGT TACTTAGTGACTATGACGTCATATGTTCAAAACTCCTGACAATAGTCTATTTGCTTGAAGAGGTAAGGGTGTGTATATCTATCTTCTCCCAACTCTAATA AGTGGGAGCCTTATGCATTGGGCGGCCTTTTTTTATCTATTGACGGGAGAGGGTGAGCCTAATGCAACGGTAAGGTTGTTGTTGTAGGGTCCCGATCCTA TTACTTAGTAGATGATTGTATACTAGGTCATCCTTTATTGACATTAAAATTAAGTTTTTTTGCCGGTGATACTGGTGTGACTTCAAAATGTGAGTTTGCT AACAATTAGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_60862; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_154248
| Blastp | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic from Lycopersicon with 76.14% of identity |
|---|---|
| Blastx | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic from Lycopersicon with 76.14% of identity |
| Eggnog | Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol (By similarity)(COG1947) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440926.1) |
| Pfam | GHMP kinases N terminal domain (PF00288.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |