| Id Trinity | FTRINITY_DN56532_c0_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_155760 |
| Sequence | TTTCCCTTTCCTTTTTTCTTTTTCTTTTTATTTCTTTCTCTTCCCCTCTTTCCAAAATCCTCGCACTATTTATTATAAATTTCAAAAAATAGAACCACAG ATGAATCCAACGATAACCATCAAATCTCAGCATCCAAATTCTAAACCACCAAAACGATCGTTCCCTCCTTCACCTTCTCACTTTTCTTAACGACATTAAA CCAGATCTCACCTCACGCGCCTCCTAAACTACACCACGCGCCTATCACCGCCTCCTCCATCATGGTCATTAGCGGAGGGAAGACTCTGAAGCGAATGAAA AGGAGAGTCACCGCAGACTTCTACGACTTTCTCTCGTTCCCGTCTCCTACCCTCGTCACGACGGAGAACTTCGCCGGAGAACCGTTCCGTACCAACGTGC GATCATTCCTCACCAAACACGCGCTTCTCCCGCCACCATCGGCTCTATTCCCGCACCTGATGACGTGGCAGATCCTCTTCCGAATCGGTGATCTCACCGA CGGTTTCCCTGAGTCGGTTCCGGCGGTTGTGTGCCTGGACGTGGTGGAAGAAGACGTGGCCAGATCCAGATCCGTGTATTGTGACCAATGCCGAGTTTTC GGCTGGAGTGCTCACCCAGTGTGTGGAAAACGTTACCATTTTATAATTAAAGCTGATGGGAGCTCCATTGGTGGGTACCACAAGCCGTGTATGTGCTGTG GAGATATCCTGCATTTGTCAGAATCCAGGTGCAAGTCATGCAACCATGTTACAACTACTGATGATGTTGAAGACTGGGTTTATCACCAGTTAGAGAACAC AACTCATCTTTTACATGGTGTAGTCCATGCCAATGGTTATGGGCACCTTCTTCGGGTTAATGGCAGAGAAGGGGGCTCTAGATTTCTTTCTGGAAGCCAT ATTATGGATTTCTGGGATCGCCTCTGCAAGACACTTGGAGTTAGAAAAGTTAGCGTGATGGATGTTTCAAAGAAATATGGGCTAGAGTACCGCTTGCTCC ATGCCATTATGAAAGGAAATCCTTGGTATGGTGACTGGGGCTATGAATTTGTCTCTGGCAGCTATTGTCTAACACAGGAAGCATATAAATCTGCTGTTGA AAGCTTATCCAATCTACCCTTATCGATCTTCCTCTCCAAAGGACAGAATCCCCACTCTCGTGTGAAGGACATGATCTCTTATTACCATTCGTTGTCTGAG CATAAGCTTGTAAATATGAGGGACCTCTTTTGTTTTTTGATGTGCTTGATTAATGATGCTCGGAAGACTGTTCCTAAGGTAGATGACATAAACTGCAAGA AGCGCCGACTTAATACTTCTGGAATTTCTGGTTCTTGGGAGAAGAACGATATTGAACGTGTAAAGGAAGCCATGCTCAGAGTGTTGCGAGCGGTGTCCGG GTCCAATTGGGTGAGCTGGCGTGCTGTCAGGGGAGCTGTCTGCAAGGTGGCCTCTCCAGAGCTGCTTGATTATTGCCTTGGAGAATTAGAAGGAAAAGTT GTCCATGGTGGGATGGTTGTTAATACCCGATGCAATCCTCAAACTGGAGCTTTAGAATGCAGGTTAGACTTCAATCTGCTTCTTATAGGATGTCTTCCCT TGTTTTTCCCCTTTTTGCGTCATAATGACTTGGAAAGTGGACAAATTTTAATACGTAGTATGCCTCAGTTTTTATGATTTTGAAAACAAACTACTGCGCT GCTTACTTTTACATCTGATCTCAGGATTATAATGCACTAGGGTAGTGCAAAGGATAATTTTTATAATTAATTTACCAGTTGCTTGTTTTTCATGATGCAC ATATCCAATAACTTTCTTAGAGGTTGAACCATATTGATGCTCGTCAAACCATATTGATTAGTATTATTTGTAAGATTCTCTTCTGGTTGCTTTTAATCAT TTATCTAGTTTCTTGTCTGTCTTTATATTATGTAAATTGGTCCTGGTATTAATGTACTTTTTCGTTTCTATTTGCTGTAGACTTGAGGCTGCGAATGATT CTTTCTATGGAATAGTAGCAAACAACAATTCGTCAGGTCTTAAGTATCCATCCGAAGAGAATCTCCTACAATGCTTGAAATATTTATATGAGTCTTTGCT TCACCCTCAGGTGATGCTAAGTTATTTCGCAGAAGAGACGAGGATTCTTGCATTGAGCTCCGCTCAGAAACTTCTTGACTGCAAGCAGTTTGTAAAAGCT TATAGTCCTGAGATGTTGCCAGTGTCAGATTTGTATAAAATGCGCATCTCATGTCAGGTTGAACTTGTTGACGAATCAGAAGATCCTGCAGCTAAAACTC CACCAGAATTAGTTGTGCTGCCCATGAATGCCACAGTGCATGACCTCAAGATAGAAGCAGCAAATGCTTTTCAAGATGTATATCTTATGTTTAGAAGATT TCAAGTTGATGAGCTACTTGCTTTTCGTGGTGTAGATGATTCCACCCAGGTCAAGCTCTTGCTAGGATCGAAAGAAACAGTTTGTGTGCGAGGAAAATGC ATGGGGAAGAATGGATTGAGCAAGTTCCGAATGGAACGAGGACTTGAGAGGTGGACAGTAGATTGCAGCTGTGGGGCTAAAGATGATGATGGGGAAAGAA TGTTGGCTTGTGATATATGTGGCGTGTGGCGTCACACCAGGTGTTCCGACATTCGTGATATTGATCCTGTTCCAGCGCGTTTTGTTTGCCCAAAATGTCT GAACTCTGACTCAAAAACTAAATCTAGTGGACACTGCAAAGATGAGACTGTGACTAACGTTAGCACTGCTACTAGTTGCTTTGGAAAGGGCTTGCCTGTG CCTCATGATGTTCGTTAAGGTAAATTTACTAGATGTGCATAATAAAAAGCCCTTAGGTTACCAAAAAACAAAGCTCTTTGGTTTCTGTTTAGTTTGCTTT GGCCTGAGCAATGATCTTGTACATAACAACAGATAATCCTTAAAGATGACTTCAGGGACAGGGTATGTTTTGTTTATATTTTAGGTTCTAACTTCCTTCG TTTATTTTGTATATAATGACTGATGCAATCATGGGAAACGTGGGAGAAAATTCTCGAATGGTACTTGAAATAGTGTTGTATAGGAGAATCGAACATAATT ATACTTAACAACCTCTTTTGCCTCAATTACCTATATTGCTTACTTGATATCTTCCATGGGTGATTTTTGTTATACTTCTCTTATTTGGGTAAGCTGGTAT AGCTTTTGAAATAAGAGAAGTGTCTATTTTGATACTCTACCTCGTTAGTGTAACTATTCCTTTTGAAGAAAACAACATTTTGAAGAGAATTCTGGTAACG TGTTTTTTCTTAAAAGTATTATTATAGTTATACCTGTTTAATTTTTTATTTCATTATTATTTCAGATATATCAGATTTTGGATAGATTCATAATCTCTAT ACCTCAGTGGCTTTGGGCATGTTTGAAAAGCACATACCTTGTCACTTTGTAGTGGTTAGATTCCTATTATTACATATAAACAACACGTACCTTCTTGTTT TACTTCAGTGAACTATCAACTTTTTAAGTTGTAAGCTCTACTAATAAAGGAAAATACGTCAAGGCAACGTTTAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_60950; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_155760
| Blastp | PHD finger protein At1g33420 from Arabidopsis with 49.19% of identity |
|---|---|
| Blastx | PHD finger protein At1g33420 from Arabidopsis with 50.56% of identity |
| Eggnog | PHD-finger(ENOG410YQGC) |
| Kegg | Link to kegg annotations (AT1G33420) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441144.1) |
| Pfam | PHD-finger (PF00628.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |