Id Trinity | FTRINITY_DN56533_c0_g1_i10 |
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Name Transcript | Ll_transcript_156305 |
Sequence | GTTCAATTATGAATGTAATAAACAAAGCTATTAATTCATTGACATTAGCAATATCATTGTCCTTATATTATTGATTGGTAGCAACAATATTTTATGATCA AAAAAATGTGACATGAGAGAACCTTATCTAAAATACTATGGACTTAAGCTTCTCTTGGTGATCTTTAAGGGACCAAAATTTATTTTCATCCACTCATAAC ATACCCCTATCAGTTATACAAAAGCCAAGATATACATTCTTTGGTCATCAATCCTTTCATATTTTACACTTTGTCTTACAAGGTTCATTGGTGGTTGAGC CTAGTTTTCAACTTTGCAGCTTTACAAAATTTTCCATTGTGTTCTTTAAGGAGCAGAACATGGCACAGATTTTGGCACCCCCTACACAATGGCGGATTAG AGGCACAAAAACCTCTCCGAATGCAAGCCCGATCACGTCAAACATGTGGAGTTCCTTGCTGTTGAGGCAAAATAAGAAAGTCGCGCCGATTAGTTCTACT AAATTTAGAGTGATGGCAATCAAATCTGAAGGTGGCACCATCAACAGGCTAGAGGGTCTGCTTAATTTGGATGTTAGTCCATACACTGACAAGACAATTG CTGAGTACATTTGGATTGGAGGAACAGGAGTTGATGTCCGCAGTAAATCAAGAACAATATCAAAGCCTGTTGAACATCCTTCTGAACTCCCTAAATGGAA CTACGATGGATCTAGCACCGGACAAGCACCGGGTGAAGATAGTGAAGTAATCCTATATCCTCAAGCAATTTTCAGAGATCCTTTCCGCGGTGGCAACCAT ATTTTGGTAATGTGTGATGCCTACACACCAGCAGGTGAACCTATCCCTACAAACAAGCGACACAGAGCGGCCGAAATCTTCAGTAACCCAAAGGTCCAAG CTGAAATTCCATGGTATGGAATAGAACAAGAGTACACTTTACTTCAAACACATGTGAACTGGCCTTTGGGTTGGCCTGTGGGTGGCTATCCCGGTCCTCA GGGTCCTTATTACTGTAGTGCCGGGGCAGATAAGTCATTCGGACGTGACATATCTGATGCTCATTACAAGGCTTGTTTATATGCTGGAATTAACATCAGT GGCACCAATGGGGAGGTTATGCCTGGGCAGTGGGAGTATCAAGTTGGTCCTAGTGTAGGTATTGAAGCTGGTGATCATATCTGGGCTTCAAGATACATCC TTGAGAGAATTACTGAACAAGCTGGAGTTGTTCTCACACTAGATCCAAAACCAATACCGGGTGACTGGAATGGTGCCGGAGCACACACCAACTACAGTAC AAAGAGCATGCGAGAAGATGGAGGCTTCGAGGTAATAAAGAAGGCGATTTTGAATCTTTCGCTTCGCCACAAGGATCATATCAGTGCATATGGAGAAGGA AATGAGAGAAGGTTGACAGGAAAGCATGAGACAGCCAGCATTAACTCATTTTCTTGGGGAGTGGCTAACCGTGGTTGCTCGATCCGTGTCGGAAGAGACA CAGAGAAGAATGGCAAAGGTTACTTGGAGGACAGGCGACCGGCTTCAAACATGGATCCATATGTAGTGACTGCATTACTGGCAGAGACTACACTATTGTG GGAACCAACTCTTGAAGCTGAGGCTCTTGCAGCTCAGAAGCTAGCATTGAAGGTCTAAAACTATTGATGATGCTGCAATTCTTGAAGGAAACACTACCTT CAATGTCCTTTTTCGATTATTTACATTGTATATCAGATATTTGGGTTGTTATATTTGCATGTGGATCAATTTAAATTGATGCTTGGTTAATATTCAGTGT GTACTCTTTCCTAGAAGTACTTGCTATATGTACTTGAGACATAGCAGGCATTCAGATTTTCTTGTATGGGCTTTAGACTAAAAGCTCAAGTTAATAAAAA TGACAACCTTAAAAGCAATATAAAGAACATTGATTGCTTTGTTCTTTTGTTTGTTTGACCAGATAAAAGCAATGCTGTGATGATTAATGGTG BLAST |
Tissue | flowers |
Gene name | LI_gene_60954; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_156305
Blastp | Glutamine synthetase leaf isozyme, chloroplastic from Phaseolus with 90.51% of identity |
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Blastx | Glutamine synthetase leaf isozyme, chloroplastic from Phaseolus with 90.32% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (PHAVU_006G155800g) |
CantataDB | Link to cantataDB annotations (CNT0002361) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425876.1) |
Pfam | Glutamine synthetase, beta-Grasp domain (PF03951.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |