Ll_transcript_156489

• Id Trinity: FTRINITY_DN56555_c0_g1_i18
• Name Transcript: Ll_transcript_156489
• Sequence: GTTTTATTCAATTACAGTCCCATAACACCTACATTTTTTTGCATATTTTGTCTTATGTTTGTGGCAGACAGGGAGGCAATCTTCATCGTCTCAAATTAAT ACAAGCAAGGAGGTGATCCTTAGCCCTAAGACACCAGGATCTCGATCACAGAAAGTGCCAGTACATAAGTTGGTTAGAACAGATTCATTAGATCCTGCTG GAAGATTACATGCTTACGTACAAATGAAGCTTGATGGACATATTGAAAAGTGTTCTAGTTTGAACGCAGTAAGGTCCTCAGTTAGACAAAGAAGGAACCC AAAAGGTTCCTTAGATCTGACTAGTGTTCAAGAGCTTCTTGATGAGATCAATAACAAATGTGACCCAGGCATGATGGACATTGTAAGGCACTGCACGTAC ATTGGAATGGCAGATGATGTTTTTGCTGTCATTCAACACAATACCCATCTTTATCTTGCGAATGTTGTAAACCTGAGCAAAGAGCTTATATATCAGCAAG TTCTGAGCCGTTTTGCCCGTCTCAATGCCATAAGTATAAGTGATCCCCTCCCCTTGAAAGACTTGATTATATTAGCGTTGAAGGAGGAAGATTTAGATTC AGAATGTAATGATGTGGATCACCTCCAAGAGAAGATTGCTGAAATGAACTCAGAACTGCTGAAACAAAAGACTGAAATTATGGATGAGTTTTTTAGCATT TACATTGACAAACATGGAAATGTTGCTACCCTTCCTGTGATACTCGACCAGTATACTCCTGACATGGATCGCATCCCTGAGTTTGTGCTTTGTTTAGGCA ATGATGTTGATTGGGAAGATGAAAAGAATTGCATTCAAGGAGTTTCAGTTGCTCTGGGGAATTTCTATGCTATGCATCCACCAATGTTGCCAAATCCATC TGGTGAGGGCTTGCTTTTCTACAAGAAGAGAAAAGTGCTAGACAATTGTACCAAGGAAAATGCATGTGATAGTACTGGGAGCAATGTAGAGAATGATAAA GTTGATCACGAACTGCTTTCTGAAGCCACAACTGAATGGGCTCAGCGCGAGTGGACAATACAACATGTGCTTTTTCCTTCCATGAGACTCTTTTTCAAAC CACCTGTTTCTATGGCTACTAATGGAACCTTTGTTAAGGTAACTTCATTGGAGAGACTGTATAAGACATTTGAAAGATGTTAGGCAACCACATAGATTTT GAGACTGTATAACTCATGCTACTTAAATGTATATACCAGGTAGTGGTTACTTTTCCCAAAATTATCTTCACGCATTTCAAGTTTTCTTATTCAACTCTGA ATTCTGTACTCTGTACTCTTGTCCTTTTATATATTTCAAAACTGGTATTGTACAAATCTTACTAGTCCAATACAATATTAATTCAAAATAAA
• Tissue: flowers
• Gene name: LI_gene_61159;
• Additional information: details;

Expression of Ll_transcript_156489

FPKM

• FPAB: 0.1
• FPNAB: 0.5
• LF1: 0.7
• LF2: 0.2
• LF3: 0
• LF4: 0
• UF1: 0.8
• UF2: 0.3
• UF3: 0.2
• UF4: 0.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_156489

• Blastp: DNA mismatch repair protein MLH1 from Arabidopsis with 66.11% of identity
• Blastx: DNA mismatch repair protein MLH1 from Arabidopsis with 65.25% of identity
• Eggnog: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (By similarity)(COG0323)
• Kegg: Link to kegg annotations (AT4G09140)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441032.1)
• Pfam: DNA mismatch repair protein Mlh1 C-terminus (PF16413.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;