Id Trinity | FTRINITY_DN56558_c2_g1_i15 |
---|---|
Name Transcript | Ll_transcript_155724 |
Sequence | GGTGGATAGATTCTAAGGTGAAAAAACCCTGATTGAAAGGGAAAATTAGAACATTTTGAGAAAATAAGGGATCATTGAGCAATTATGAAACATCTGAGTT CCAAATTTCCAAAACTTTTCTGAGAATAAGAAACGTATTTTCATCGAACACAATCCATATCTCATGATCTTTCAATCTGTTCATCGAAACATGTTTGGGA TTATTAAATCGATTTTTGTGCCTACAAACACTTGATCTTGTTTCAATTCTCACTCTTCTCTAACATGCTCCTCGTGATTCTCTTATCTGATGCATTATAC CTTTAACTACCGATTCTTCTTTAATTTCTTTCCATTTTTCTATTAATCACTATAAAGCTCTACCTTTTATGCTTTTTTCTTATTACAGATCAATAATAGT CAGGATCTTTCTATGTGGATAGACATAGACACGGGAGAAGGCAGCACTCAACTTCCAAGCTTCCTTTTAGAATAAAAGGGAAAATTATTATATCATAAAA AGGTTGTAGATTTCTTGCAATGGGTGCTCCTAAGCAGAAATGGACTGCAGAAGAAGAAGCAGCGCTGAAAGCTGGAGTAGTCAAACACGGGGCCGGAAAA TGGCGCACTATACTTACAGACCCAGAATTCAGTTCTGTTTTGCGCATGCGTTCTAACGTAGATCTCAAGGACAAATGGAGGAATATAAATGTCACAGCAA TATGGGGATCCAGGCAGAAGGCAAAGCTTGCTCTTAAAAAGAACCTACCAGCCCCCAAAATCGACAATATCCATATGTCCTCGAGTATTGTAGTTTACCA TGCTGAAGAAGTTGCTGTTACTAAGACTTCAGCAGCTTCTGGTGGAACATCTTCTACTTCAAAAGAACAAATACCAAGGTTACAGAACTTCCACTTAAGT ATATCTTTCATGTGCTCTTTAGAGAAAATTAATGGTCTGCGGTGTTTGGTTGGTTTATCCTGTTCTTGAGTAGCACATGGACAAACATCACATGTTGTCG ATATTACATCCCTTTCAAGTAACTAGTTCTAAGATTGCGTAAATCAAAGTGCTGGCATACCAATCTCCTAAATGAGTAAATAACTAAACCAAATTGCTAG CATTTTTTGCTTTTTTTTGTGTAGCTTGGAGTATCTGATATCTTGATTCTTCATTATTTATTGATTTTCATGATGACTTTGCTCCAATCATGGGAAAAAT AAACTAAAAAAATATAACTCAGTTACATGTATATTGGTTCCAATTACATTTAAAACTAGTTATCTTCTTTTCTGCCGCTTCTGATACATCCCATCAAGTT TGTAAATTTTACGGCAACATGTGTTCTGGTTGTGGCTGCAAATGCTTTTTAATAATGGCAGGTTGGATACTCTTATATTAGAGTCTATTATCAAGTTGAA GGAGCCAAAGGGTTCTGATAGGGCTGCTATTACTGCTTATATAGAGGTATGATTACTTCAATTTCTTCACTCATGGTTCTAGAATCTAAATGTCTTGAGA AACAAATGGTTATCTTGGTGCATGTAATCTTCAATGATACAGCTATTACTTAATTTCTGCTTTTGCGAACCTCTTGTTTTTTCAGGTTATTTTGTCATGA ATTGATTTACATTCAAAATTAGACCGTAAGGATATTTTTTTACCCCTCCGTTATCAAATACTTTTCTCTTTTAAATATATAGATTTTATATTGATTGATG TATTACTATTAACTATCTGTGACAATATATGTGCCAATGTGCCAGTCTGCTTTGTGGTCAAGTTTATGATATTTAAAGTTTATTGAATTGCTTGGAAGTA TTTCTCTATTAGTTCCGTAGAGTTATATAGTTTATTAATTACCAGCAATTTCAGCTAGCTATTACATGTAATTATCATAATTCCTTTCCATATAGTGCCA AAAATTCATGCTATTTTTTATTTAAATATTTCTACTTGTCGAGTCTAAACAAGTCTTCTCACCTGGTAAGTAAGTAGCTGTTGATTTTTTGCCCTCCCAT GGTTCACCAAGGGTTACCATAATTCGAGCACTCATAATATGCTATGTAAAGTATATGTTGCTTTTCTTGTCAGATAACCTGATTAGCTTGCCACATTGGT AATATAGCCAATAATAGCACTATAATTTTCCTGTGATTGTCTGCACCACTCTATCCAAAGTAATTCTGGAACTTTTCACGTCATTAGGATCAATACTGCT CTCCGCCGAACCTCGAAAAGTTACTATCAACAAAACTGAAGCATATGGTGGCAAGCGGCAAATTAGTGAAGGTAAGTTTACTGTTAGTTAATGCCATAGG AGCTCGCATTAAGCTTGCCTTATATAAAAAAAACTATTTACCAAAGAAACAGCACCCCCACCTGCAGACCTCTGTAAGAAAGCATAGTGGACCTGGGTTA ATTTTTGGGTCATTTGTGACAAAAATAGACGTTTAATGACAGGTTAAGCGTAAGTATATGATTTCAACAAATCCATTAAGCTCTGAGAAAAGAAGATGCT CTTCCTCCTTACTCCTTGAAGGAAGGTCCAAAGATTCTCCTAAAGCAGAGAAGACTAGTGTCAACAACCTTTCAAAATCCCAAATTGATGCAGAGTTATC AAAAATTAAAGGGATGACCGCTCAAGAAGTGGCAAGCGCGGCTGCAAAAGCAGTTGCAGATGCAGAAGCTGCTATTGCTGAGGCTGAGGCAGCAGCTAGG GAGGCAGAGGCTGCAGAAGCTGAAGCGGAGGCTGCACAAGTTTTTGCAAAGGCAGTAAAGAGGGCATTTAAATGCAAAAATTAAGGGCATGACAGCTCAA GAAGTGGCAGCTGCGGCTGCAAAAGCAGTTGCAGAGGCAGAAGCTGCCATTGCTGAGGCAGAGGCAGCAGCTAGGGTGGCTGAGGCAGCAGAAGCTGAAG CAGAGGCTGCACAAGTTTTTGCAAAGGCAGTAAAGAGGGCATTTAAATGCAAAAAACGTTCTCCTTGATGGTGTTAGCTTCTGCAAAGCTGAAACAGTAT ATTGGCTTGAGACCATAGTTCTGCTGCTATGCTTCCTGCATGTACTCAATCTGTAGATAATTTAGGCTTTTAAATCTGGAATGTGCGGAATGATCGATGA AACATATTGTCTGGAGTCAGAAAGAGCTTATTGTTTATAATCGCCCCATATTTTTAAAGAAGACAGTCTATGTGAGGGTACAAAGTAGTAGAACCCATGA TCAACATCTTATAGTAACTGAAAAATACAACTTTTAGTTGTGTTCCCTTAGCAATATGTAGTGTCATTGTCTCCTGGATCCTTTTTTCCTAAGTTGATGA ATTACTTTGGTCATACCAAGTCTTTGGAACCTGTACACTATGGAGTCTTGATAGATTGTTCGGCGCGGACATTTTCAGTTGTAAGTTATGTTTTTGAGTT TCCTTCTCAAGAGAAACAACATAGACTTCTGTTTGTGGTGTAAGGATAAGTTCTTTTACCTTTGCATAGACTCCATCAAGTGAAAGCTTTCTGCATTTGG CTACCATTTTTATTATTAATGTGAAAGATGGATCCAGTTAAAAGTTTGGTCTTTGATGAGTGCAACATTGCATCCTCTTCTTAGGAGTACTGACTGGCCA ATCTTCTTTGTCAATTGAAGTTAAGATAATCTCTCATGTAATACATTTTTTTAGCTTTAAAATCAGTGTTCAGGTTGAGAACAAAAGTCCCATCAGTACC TATTTCCCAACâBLAST |
Tissue | flowers |
Gene name | LI_gene_61175; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_155724
Blastp | Telomere repeat-binding factor 2 from Arabidopsis with 55.14% of identity |
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Blastx | Telomere repeat-binding factor 2 from Arabidopsis with 81.82% of identity |
Eggnog | DNA binding double-stranded telomeric DNA binding protein homodimerization single-stranded telomeric DNA binding transcription factor(ENOG4111CH3) |
Kegg | Link to kegg annotations (AT5G67580) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421379.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |