| Id Trinity | FTRINITY_DN56559_c0_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_154830 |
| Sequence | CCCCGCTCCTCAAATCAATTTCACTGCTACTGCACCTGCACCTGCACCTGCACCTGCACCTGCACCCGTACCAGCTCCGGCACCCACACCCACATCAGCA CCAGCACCCGCACCCCCACCAGCACCCACATCAGCACCAGCACCAGCACCCACATCAGCACCAGCACCAGCACCCACACCCACACCCACACCCACACCCG CCCCAGCATCCACACCTGCACCCGCACCCGCACCCATTACTCCTCCTGGACCAAGGCCCCCACTTGTATCTGTAGCACCCGCATCTACCGTATCTGTAGC ACCTGGTCAAGGAGTCCCTGTTGGTGGAGCTCGCCCTCAAATCTCAACTGGAGCAGGTACAGGAGTTACTCAGGTAGGGCCTGGACTGCCACCAACATCT GGATCAAATGCTTCTGTGCCTCCATCAGATCAAGTGGTTAAGGATTCCAAATCAGTCAATAATAATGTTTTTGCTTCTGGTTCATTTTTTGGAGGGGATA TGTTCTCTACTTCTACCTCATTTCAACCTAACCAAGTTTCTTCTCCACAACCATTTTCGTCATCAGCCGTTGTTCCACTATCCGGAGGGAACCAACATTC TACTGCGACAAGCACCAGTACCCGTGATTCTTTGCAGACCCAGCCTGTTGGTGCACAGCATCTTCAACAAAACCAGCAAGCTGCCTCAGTCTCCCAGACA CGTAATATGCTGAATCCATCTGTTCTACTTCCAGTGAGATCGCATGATTCTGCTTCTACTCAGCCCCAACCTCCTTGGCCAACGATGACTCAGACTGATA TTCAGAAATATACCAAAGTGTTTGTTGAAGTAGACACCGATAGAGATGGAAAAATCACTGGGGAACAAGCACGGAACTTGTTTCTTAGTTGGAGATTACC AAGAGAGGTTCTAAAGCAGGTCTGGGACTTATCTGATCAAGATAATGATAGCATGCTTTCTCTCAGGGAGTTTTGTATTGCTCTGTACCTAATGGAGCGG CACAGGGAAGGACGTGTTCTTCCAGGAGTACTCCCGAGTAACATTATGCTTGATTTACCTCCCGCTGGTCAACATTCCACTAACCACAGTGCTGCAGGTT GGGGAAATCAATCAGGATTTCAACGACCGCAAGTGGCAACTGGTTCTGGTGCTCGACAAGTGAACCCTACTGTTGGTCGTCCCCCAAGGCCAGCTGCTGC CCCTCAGGCTGATGAAGGACCTCAGAACAAGCAGCCAAAGTCCAAAGTTCCAGTTTTGGAGAAGCACCTCATAGATCAGCTGAGTTCAGAAGAGCAAAGT TCAATCAATTCAAAGTTTTCAGAAGCAACAGAAGCTGATAAGAAGGTGCAAGAACTTGAGAAAGAAATTGTTGATTCTAGAGAGAAAATAGAATTCTACC GTGCAAAAATGCAGGAACTTGTTCTTTACAAGAGCAGATGTGATAATCGTCTTAATGAGGTCGTGGAAAGGATATCTGCTGATAAACATGAGGTTGAGAT TCTGACAAAAAAATATGAAGATAAATGTAAGCAAGTTGGAGATGTATCGTCCAGGTTAACTACCGAGGAAGCCACATTTCGTGACATACAGGAGAAAAAA ATTGAATTGTACCAAGCGATTGTCAAGATGGAACAAGATGGTAATGCTGATGGCACTCTACAGGCGCATGTTGATCATATCCAATCAAACCTTGATGAGC TGGTGAAATCTTTGAATGAGCGGTGTAAGAAATATGGATTGCGTGCAAAGCCTACAACACTAGTGGAGCTCCCCTTTGGCTGGCAACCTGGCATCCAAGA AGGAGCGGCTGACTGGGATGAAGACTGGGATAAGCTTGAAGATAAAGAATTTGCCTTCGTCAAAGAATTCACTCTTGATGTGAAAAACATCATAGCGCCT CCGAAACAGAAATTGCCATCAGCGGTGAACATAAAAACTGCAGACATTGACAGTCCAAGACTTGAAGCTTCACCTAAGAGTGATGGAAAGTCTGAAAAGC CCCAAACTACAGATGAACAGGAAGGTGGCAATGGATCTGTTGATAATAAAAGTGAAGACGGGTCTACAAAAAGTGCTCCTAATAGTCCATTTGCAAAAAG TGCTATCGCGAGCCCTCATAAGGACTTTGCTGATTCTAACATTAGGACTGCAAATGAAGACAGCTCACCCCATGATCAAGATACCGTTCACGAAACTCAA AGGTAGGATTTTCATGATTTGCAGGCCAGTTATCCAATTTCTGGTCAGTTGCTCGTTTGATCATGAAATTAGTGGAAGAGTGCTCTTATCTTGCTGATTA TTAATATTCTTGCCGTTAAGGTGTGTTTATTATTATTAATTTATTTTTAGTAGAAAAAGAAAAATCATTAAGGAAGAAGAGAGACGTACAAAGAGAGGAT AAGATATCCTCACAAGAAAACAAAAGAAACACCTAGTAGGTAAGAGATTTAGTTACCTAACAAAGCATGCCAAAATCTTTTTATGTCTCCAACAAAGAAA ACCTCTGAGTAGACCATGAGTAGAACACTACAAACAAGCTACAGAGAATCTGTTGAAAATTAAGAAATGGAGATATACCCTAAAATCCACATGTAAATAT TCTGATAATGTCCAGTCTTATTATGTTTTATTACTTTTGTAGTTATGTCTAAGTTGTTCCTTGATTTTCGAGACTTCACATTCTTTTGGTCATGTTACCT CTAATGTTTTCATGATTCTATGGTGCGTTTATATGATTCTAAGACTCTGTTATGAGACTAATGAGTGGTTGGACATTAACCTTCATGAGGCAGGCTGGTG TTTTTGGGGTTGCTGCCCAATCTGCATTTGACCTCGTCACAACACTTATCACTCTAATGTAGGCATTATATCCCAAATTGTAGAAATTTAAATCACCAAG AAGTATATCTTGAAGTGGTTACAACACATGTTTTCTTTAGGACATTTTGATGGGGTCAGAAACAGTGTTGGATTAATGGGAATTTTATAAGCATGTTGTG CTTGATATGAACATTCAGTCCAACTGTCAGGTTAAAAGGTGGTTTAAAATGATTGTTGATATCACTGGTGTTAACTAATACTAATATACTTCATTTCATT TTTTACATGATAAGATCTTATTATCTTGCAGAATAATTGTTCATGTATAATCTTGCATGTGCAGTGATCATAGTGGTGTCAAGTCTGTATTTTCTGGAGA CAAAATTTTTGATGAACCAAATTGGGGAAGCTTTGACACAAATGACGATATTGACTCTGTTTGGGGATTCAATGCCAATAGCAATAAGGAGGAGAGAGCT CTGGACAAAGGTGGAGACAACTATTTCTTTGATTCTGGGGAACTGGGTCTCAACCCCATTAAAACAGGTTCATCACAGGCTGGTGATCTCTTCCCAAAGA GCAGTGGATTCAGTTTTGATGATTCTGTTCCAAGTACTCCACTTTTCAGCTCAAGCAGCTCCCCACAAAGGCCAAAAGAGTGGTCGGAAACTGCATTTGA CAGCTTCTCAAGATTTGATTCTTTCAGAACACATGATAGTTCATTTTCAACTACTTGGGAGGCAGCACAACAATTTGATTCAGTACGTGGCAGTACGGAT TTTGATAAAGTTCATGGCTTTCCAGCTTTTGATGACCCAGATCCCTTTGGCTCGGGGCCATTCAAGACTTCATCAGAAAGTCAAACTCCAAGAAAAGGAT CTGATAATTGGAGGGCTTTTTAGTTTAGTGATTCTTCATATGTGCATTTTCCTCTATGTTGAAATGGGTTGTATGTCTGTCTCACTGTTTGGAACTTGTT ATTTTTAATGTATTCTTTGTATTTAATCATCCTCTGTATTCTTTTGTTCCCCACTTTCCTTTGTTAAAAATTGAAAGTGAAGGTCTGTTTGATGGTTTTT GGGCTTTTGGTTGATAATTTTAAGAGATTTCCGTTGAAGAGATAGTGGTATTGGTGACTATCTTATTTGATTCAGTGTTGTTTAACAACCGGAGTTTTAT TATGTTTCTCCTCCCTGTTTATG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_61180; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_154830
| Blastp | Uncharacterized calcium-binding protein C800.10c from Schizosaccharomyces with 39.22% of identity |
|---|---|
| Blastx | Uncharacterized calcium-binding protein C800.10c from Schizosaccharomyces with 39.36% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (SPBC800.10c) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435797.1) |
| Pfam | Cytoskeletal-regulatory complex EF hand (PF12763.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |