| Id Trinity | FTRINITY_DN56569_c2_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_154910 |
| Sequence | AATCCTGCGACTCAAAGGACTATATCCCTGAGCTCATAAGTTCGAGTGGATAAGATGTCAAGAATGAGGTGTTACACTCACTATATAAATACACACATAT ATATATGTTCATGTAATTTACATAAAGGTAATCTTTTTTCTATTATTGGTATAGTGTTACTTACCTTCAGATACACCAAGTGGTTTAACAAGATTAAGAG CACAAGAATTGAGCAATCTAAGAGGAAATGGAGAAGGAGAACGCAAGAGCTTTGAAAGAATATATGATTATGATATATACAATGACATTGGAGATCCTGA TAGAGGCCTTGATCTTCAAAGACCTCCTTTGGGAGGCAAAGGACTACCTTATCCTAGACGATGCCGAACCGGACGTCCGCATAGCGAAGCAGATCCATTG TCTGAAAAGAGAAATGGAAAATTTTATGTTCCAAGGGACGAGTGCTTCTCCGAGGTGAAGGAGCTAACGTTTTCTACCAAGTCCTTACACTGTGTGTTGC TGATATTGCTTCCATCTCTGGGGAAAATTATCAGAGATGGGGACCTTCCATTCCCATTCTTTCATGAGATAGATTCACTTTTCAACACTGGGCTTGACTT GCCTCCTGATGAATTGGAGAAGGGATTCCTAGAAGCCATCATGCCGAGGCTCGTGAGAAACATTTCGGGTGATCAGGGAAACATGCTTCGCTTTGAGACC CCGGAGACAATGAGCAGGGATAGGTTTTTCTGGTTTCGAGATGAGGAATTTGCTAGACAGACTGTTGCTGGTCTCAACCCATGTAGCATAAAGTTGGTCA AAGAATGGCCATTGAGGAGTAAACTTGACCCAGGTATATATGGTCCAGCAGAATCAGCAATTACCTCGGAAATTATCAATAAGGAAATTGGAGGGATACT TCCTGTAGAACAGGCGATCAAACAAAAGAAGCTGTTCATGCTAGACTACCATGACATGCTTTTACCATATGTTAGCAAAATACGCAAACTTGAGGGGAAA ACGCTGTACGGTTCACGCACTTTGTTCTTTCTAACTCCGGATGGAACACTGAGACCTCTTGCCATTGAGCTGACTAGACCACCCATGGATGGAAAGGGTC AATGGAAGCAAGTTTTTACACCTACTTGGCACTCAACCAGTGGTTGGCTCTGGAGAATTGCCAAGGCCCATGTTCTTTCACATGACTCTGGCTATCACCA ACTTGTTAGTCATTGGTTAAGAACTCACTGTGTGACAGAGCCCTATGTTATTGCAACTAATAGGCAACTTAGTGTGATGCACCCCATATATAGATTGCTG CACCCTCATTTTCGTTACACGATAGAAATTAACGCTTTGGCACGAGAAGCACTTATTAATGCTGGTGGCACAATTGAGGGTGCATTTTCACCTGGAAAGT ATTCAATGGAGATTAGTTCTGCTGCCTATGATCTTGAATGGAGGTTTGACATGCAAGCTACCCGCGGACCTAATCATGAGGGGAATGGCTGAGAAAGATC C BLAST |
| Tissue | flowers |
| Gene name | LI_gene_61270; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_154910
| Blastp | Linoleate 13S-lipoxygenase 2-1, chloroplastic from Solanum with 70.8% of identity |
|---|---|
| Blastx | Linoleate 13S-lipoxygenase 2-1, chloroplastic from Solanum with 65.22% of identity |
| Eggnog | Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity)(ENOG410YN4N) |
| Kegg | Link to kegg annotations (102596122) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413925.1) |
| Pfam | Lipoxygenase (PF00305.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |