| Id Trinity | FTRINITY_DN56574_c0_g1_i18 |
|---|---|
| Name Transcript | Ll_transcript_154143 |
| Sequence | CAACGTTATATATGTCTGCTTCATGACAAACTGTGAAACGGCGTCGTTGCAAGTACGTCACTTCACAATGAAGAACAACCCTCCTTCTCTAATTTCTCTC TCTATCAATGCACTCTCTCACCAACTTCTCCATAGAAATGATGAAGTTTATGATGATATTTATGATCTTCCTTCTCATTTACTTGATACCTTAATTACCT CTTTGCCCCCACTCTCTTTGCGCAATTTCCATCATAACCTGCCATTCGAGGATCGCAATGCTGAGGATTTTTCTCATGATAACTTAACAAATAAGCGAAA ACGCGGCAGGGATTGGAATCTAAATACAGCTTGGCAGAGGTTGTTTAAGTTACGGTGGCCCGATCTCATCGACAAGATTCAACCAACAGATTGGCAACAA GCATATTGGGAAACCCATTTGCAAAATTGTTTCGATGAGGCGGCAGAGATAGCACTAGTCCCATCTTTTAATGGATATATTAGTGACATACAGATGTCAG ATAGCATATTGAGTTATATTGGTTTTACGGGACATACAGATCATTCAACTTGCGACCATTCAAAACTTTTGTACCATTGCCAACAATTTGGCAGCCATGC AAGGTAAGATGTTATTGTTATCGTGCGTCATAATATATATCGACATGATCAGTTAGGATTACCTTTTAATATGAAAGAAAGGATTAAGCAATGAATTTCA TTTGTGTTCATGAATAAAAAAACTTCCTTTTGTTACTGTTAGTGAAGATCAATGGTTGAATAGTTAACGCAATCTTGCTTTGTTTATTAGTTTCGGATCC AGCTGACCAGTTAAGCTGTGTTGTCATAGTTTAAAGTTTAATGGCGGCCGTTCCCGTCACGATAATTCATTATCGTTAAGTTTATAAATTATATCTGTGC TGTTAAATACGTTATGCATCACTTCTTTTTTGCCTTGACCAATTCTTTCACCTATCACTTCGTCTCGATGCAGCTGTCTGAGACTGCAAAATGTTTTATG TGCTGCAGAAACTAGTGTAAGTTGTGCTTTCCTTGATTAATCCGAGTCTATTCGGCATTTATTCTTTTGGAATTATAATCATAATATTGCTTTTACAAGC TTATGGAAAGCATTGGCCACACATGTATATGTATTCTATACAAACACTCTAAGATGTTATGAAATATACAATTTTTGTAGTTTGTTTATTCATGAGGATT TTAATTTTTATTCTCGTTTCTAAAAGCATTTTTGAACATTTAGTGTGTGATATTTTAATACTTCAATTATATAAATTTGATTTTTCCTCTTGCTATTGCC ATTTTTTGGTTAATTTCTTATCGACATTCCTACAGTGCTGCAAACTAAATTTATGAGAGTGATGTCCAAAATGTAATTTGAATGTGGAGGTTTAATGTTT ATAACCGATTACGAAATTCAATAAGAGGAAGAGAAACAATCTTTTTTACCTCCAGAAATTAGAAACTATATGTGTTGTCCACAAGATATTGCATCTTTAT AGTTTACCGTTCAAGACATGTACCTTGTGATGTTTTCCTAAATTTCAACTCATATTTTAAAACCATGAAACATGTTATGCTGTCAAATACTCTGACCTGT AGGACCTGTTAAGGGAGTGCAAGCTGCAGAGTTTGGTGCTAAGTTGGGTCAGATCCAAGGAACAAATTGATGGATTATGCAAACTTCTCACTCAACATAG TGAAACATTAACATCACTGAAGTTTATTCACTGCACAGTCTCCAAAGATTTTATCGATGCCATATGTGGTTCTGTAGTCATAAATAGTGTACATCGACAT GGGATACAACACTTCTCGATCATTCTCTCAAGTTTTCTCGACCCATGCACATTTTCTTTACCTACTGAATTTGTGTCATTTTTGTCTTCAGGAAGGTATA TCAGCAACTCCATTCATATGTTTTGTTTTTATTGAGGTTTGGCATGTTCTAGGAGTAAAAAAAAATCAAACCTACCTCCAATTGTTAAATAAGCGGTTGG CCGGGTGCAAACGGCTTTCACACGGTTGGGTTTGATGAGGGTAAATGAACGTAGCCTTACCTCATAAATGGAGAGGTTGCTTCTAAGATTTGAACATCTG ACCTCCAGGTCACGAGACACCAACCTTACCGTCGTATCATGGCTCACCTTACCATTATATGACATGATTTGAGAGATACTGAAAGAATTGTATATCTTGA GAATCATTTATCTTATAATAATACATTATACCTAAGACTTTTAATAATTTTTGTTATCAGAAAAGACTTTTGATAATCTTAGTATGTTTCACATGACAAT AGAACATTTGTTGTATTATGTCATTTGTTGTATTTTACTAGGACAAGTAACTAGATAATAGTTTTTCTTCTTGTCAACATGATTTCTTCATGCTTATAGG TCTTTGTGCTCATTAAAATTCTCTAACAACAACCATGGATGGAATTTTGCTAAAGCTCTTTTTGCGACTCTTCTCAATATTTCGTCTAGCATAACAATCC TTGACCTATCTGAGAATGAAATAGCAGGATGGCTTAAAGATTTCAACAAGAGATTTTCTACTGGTCCACCTATGTCTTTTGGAATTGGAAAGTCCTTGCA ACTGCTGCGCGTACTCAACCTGAGGGGAAACTATCTACGAGAAGATGATGCCGAAAGTCTTGTGTATGCTATGGCACACATGCCAATCTTGGAGGACCTG GATATAAGTGACAATTTCATCGGGGATGAAGGAATCCGCAATTTAATTCCATTATTTGATGGAACATCTGGAATGTGTTCACATTTGGTTTGTTTGAAAG TAGAGACTTGTGAGTTGTCATATGTCGGAGTTGGTCACCTATTAGATGCTCTTTCTAACTTCAAAGGACCATTGAAGTCTCTTTCCGTCGCCGACAATTA CCTCGGCAGTCAAGTAGCTGAAGCTTTGGCAAAATTTTTGAGCACACCTATCGAAGTACTTGATATCGCAGGCATCGGATTGGGTTCGTCGGGTTTTCAA GAGCTTCAAAATGTAGTGAAAGATGATCTTAAACTGGTGAAAATTGACATGAGCAAAAACCGCGGTGGGATCGAAACTGCCAAGTTTTTGTCGACGCTCT TGCCGAAAGCTCCGCAACTAGTTGATGTGAATGCAGCCAGTAATCTTATGCCAATAGAATCATTGGACATAATCAGTTGTGCATTAAAACTTGCAAAAGG TAATGTTGAGCATTTGGACTTGAGTGGACACACATGGAACTATAAGCCTGAACATGCTTCTCTACACACTGAATTTGTCAATGATGGAAAACCTATACTC ATTCTTCCATCACCATCACTTTTTGCTGCACCTTATGATGATGATCCTTAGAATCCAAGTTTCATGTGGTTCCAATTTGTGTTGAATAGCATAAGCTTTT AGTGGTGTATTTTTTTGTTTCATTATTATCATGAATGTTAGCTCAATTCAATGCATAATGGTTCACTATACAACAAAGTTTGAGGTCAATTTTGTTTAAT CTTTTGTACATTTTGTAACTTCTGTTTAATTATGAAGTTGGTTTAGTGGTGTAAGGCTCCAATGGATTTATAGATCGGCCAAAATGTCAGAGATTTGATT CGTAGATGATACTTGTTAGGAGGAACAGTCATACATCTGAAAGAGATTATTCAGTCATACATCTGAAAGAGATTATTCATAAGGTGAAGGTATATTATTG ATTCTACCAAAAAAAAATTATAAAGTTGGTCTTACGACCTAGTTTTCTTTTTCGACTTTTATCATTTTTTGGTCTTCATTAAATTATATGCAATGAGACA TACACATTCGGTTGCATCGAGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_61317; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_154143
| Blastp | Tonsoku-like protein from Mus with 27.53% of identity |
|---|---|
| Blastx | NLR family CARD domain-containing protein 3 from Homo with 25.44% of identity |
| Eggnog | Ankyrin Repeat(COG0666) |
| Kegg | Link to kegg annotations (72749) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456999.1) |
| Pfam | Leucine Rich repeat (PF13516.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |