Ll_transcript_153897

• Id Trinity: FTRINITY_DN56581_c2_g1_i16
• Name Transcript: Ll_transcript_153897
• Sequence: AGTATGAGGAAGAGTCTTTCTCGTAATTCTACTGGTAGTACTAATAATAATAATAATAATATTAAGGTTGCATCTTCCAATGCATTAAGGCTATCCTCAC CTCAACATTCTCTTAGACGATTGGGTTTCTGTTCCCAAATAGCAACCGCAGGGGAGCACGCTTCCCCTATTATCTTCCCGGAAAAGCGCGGCGCCAAATT CAAGGCTGCGAATGACCACGATATAGACACAACGAAGAATTTTGAGTATAGGATTGATGTCGGGGATGAGAAGTCGGATTTATTAGGATATGTTGTTCTC TCTGGAAAACTTGTTTTGGATAAGAGAAAGGTTACGCCCGTCGATACCAACAACAGCCAACAAACCTCTTCCGGTATTCCTAACAATCAACAAGCTGTAG ATGCCAAACTAACGAGCAAGGCTTTAGTTTGGGGATCTCATCTGCTCCACCTTGACGATGTTATCTCGGTTTCTTATAATGTGGGTCTCAGACATTTTAC AGTGCACTCGTACCCACTGAAAAAGCCTCCATGCACTCTTTCTTGTTTTATAAAATCACGAAGAAGTCGTAAGGACTTTCGCTTTGTGGCTTCTACTGTC GAAGAGGCAGTTCAATGGGTTGGTGGATTTGCAGATCAACAGTGTTTCGTCAACTGTCTTCCCCACCCTCTAGTGTCTTCCAAGAAGCAAGCATCCTCAG AATTGCTTCCTACCGATACCCCTCCTGAGTTGCTCTTCAGATGTAAAACTCCGCCTAAGATGCTTGTCATTTTAAACCCACGTTCAGGTCGAGGTCGTTC AATTAAAGTTTTCCATGGCATTGTCGAACCAATGTTTAAGCTTGCTGGGTTCAGATTGGAGGTAGTCAAAACGACATCTGCTGGGCATGCTAAAAATCTT GCGTCAACAGTGGACATTAGCACTTGCCCTGATGGAATTATATGTGTTGGCGGTGATGGGATAATCAATGAGGTCCTTAATGGTCTTCTTAGTAGAGAAA ACCAAAAGGAAGGAATATCTATACCTATTGGAATTATACCAGCTGGTTCTGATAACTCATTGGTATGGACTGTTCTTGGAGTTAGAGATCCAGTTTCTGC AGCAATGGCAATTGTAAAGGGGGGCCTTACTGCTACAGATGTTTTTGCTGTTGAATGGATTCAGACTAATAAAATTCACTTTGGATTAACAGTCTCATAT TATGGTTTTGTTAGCGATGTGTTGGAGCTTTCTGAAAAATATCAGAAGAGGTATGGCCCACTGCGCTATTTTGTTGCTGGATTCCTGAAGTTCTTATGCT TACCGCGGTACAGCTATGAAGTTGAATATCTTCCAGCATCAAAAACTGAGAGAGAAGGAAATGTCTTAGTTGAAAGTGAAGTACTTGACATGTCAGATCT GTATACCAACATCATGAGTAGATCGAATAAGGATGGGTTGCCCAGAGCATCTAGTCTTTCCAGTATTGACTCGATAATGACTCCAAGTCATATGTCTGGT GGAGACCTGGATACCTGCAGTAGTACTCATGCTAGCACCGAGCCTTCCGAATTGGTGCGCGGCTTAGATCCAAAGTCAAAACGCCTGTCATCTGGAAGGG GCAATGTAACATCAGAACCCGAAGTCATCCATCCACAGCTCCCTCTGTCAACAACTCCAAACTGGCCAAGAACCAGATCCAAGTCAAGGAATGATAAAGG ATGGAGTGGATTGACCACCACACATGATACCTCTAGATGGGGCAATTCTGCGACAAATGACAGAGAGGATATCTCATCAACACTTTCTGATCCAGGTCCT ATTTGGGATGCTGAACCAAAGTGGGATGGTGAGCCTAATTGGGACGTGGAAAACCCAATTGAGTTGCAAGGTCCTCTGGATGATGCAGACATAGGATCCA CCAAGGAGATCGTGCCTCGTTTTGGAGACAAATGGGTTGTTTCAAAGGGACAGTTTGTCGGCATTCTGGTTTGCAACCATGCATGCCGAACAGTTCAGAG CTCTCAGGTGGTCGCACCCAAAGCTGAGTACGACGATAATACTCTAGATTTGCTCTTGGTTCGTGGAAGTGGTAGGCTGAGGCTATTGAGATTTTTCTTA CTTCTACAGATGGGTCGACATCTTTCTCTTCCATATGTCGAATATGTCAAGGTATATTGCATTAACAGTTGTTTTCACTCCATAATTATACATTTAACCA CACACTACTTTGATCATTACACATACTACATTATTTTTTACGATCACAGGCATATTCTTTTATCCTGGTAATTTGTGCATCCGCATGCAGGTAAAGTCTG TGAGGATAAAGCCTGGGAAGCATACTCACAACGGATGTGGTATCGATGGTGAGCTTTTCCCACTCACGGGACAAGTAATTTCGTCTCTGCTTCCAGAACA GTGCAGGCTTATCGGTCGTTCTCGTGTATGATGATAATTGGGAGTGAAGTGTTTTGATTCTTTGTGATGGGTTCCGGGAAGATCATGTACCTTCTCATTC TCATATATATGAATTCAGATACCAAATTTGTGTTGTCAACTATTTTGTTGCTTGTAACAGCTGAGCTTTGTAAATCTTTTGTTCCGGTTATATGTATCCG TTGTTGCTTGCTTATCTGTTTTCGTTAAAAGGGAGAAAAACTGCACGTTTTGTGCATTTCAAGCTGCAAGCTGCTGAATGTACTGCACCATCTAATTATT CTAGATATCATCCAAAAAAATCTAATTATTCTGAAGCG
• Tissue: flowers
• Gene name: LI_gene_61363;
• Additional information: details;

Expression of Ll_transcript_153897

FPKM

• FPAB: 1.4
• FPNAB: 1.1
• LF1: 0.8
• LF2: 0.8
• LF3: 0.5
• LF4: 0.6
• UF1: 0.8
• UF2: 0.5
• UF3: 0.7
• UF4: 0.9

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_153897

• Blastp: Sphingoid long-chain bases kinase 1 from Arabidopsis with 70.9% of identity
• Blastx: Sphingoid long-chain bases kinase 1 from Arabidopsis with 70.63% of identity
• Eggnog: diacylglycerol kinase(COG1597)
• Kegg: Link to kegg annotations (AT5G23450)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452866.1)
• Pfam: Diacylglycerol kinase catalytic domain (PF00781.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;