Ll_transcript_153879

• Id Trinity: FTRINITY_DN56581_c2_g1_i3
• Name Transcript: Ll_transcript_153879
• Sequence: TTGAATGGATTCAGACTAATAAAATTCACTTTGGATTAACAGTCTCATATTATGGTTTTGTTAGCGATGGTAAGTCAGTGCTATGCATAAAACTCTTAAA TTCAGACTTCATATTATTATTGATCGACAATCCATCTGTTATCGCTTAAAAAGGAAACTTCTTCTAGCTTTTTACCTTGTGGGATCATTTGCTTCTTCTT GAGCAACTGTGTTTTTGCCTTTCGGAGAACCTGCCGGTCTTAAGAATATGTGGCAATACTTAACTTTCAGGTTGAAATGTTTATTATCAGAGATGTCTGT TTTCTAATTAAGAGAAGAATATATATTATATAATTGAATTGAGACCTTTTTTCTTTAGGAAAATATTGGAATTTTTGGTAATTGATAGAGTGGTTATTCC ATTTTATAAAAAAATAGTCACTATACGAACTTATATATGCAATACACGCCGCTTTTATGGGTTGGGGCAGAGAGTGAAGAAATCATGTGCTAGGAAGTGA TGCATTAGAAGTGGATGAATCACTGTACATTTTACAATGTGTACTTGGTCGCTTAAAAACAATAAAGGTAAAGAAAACATAAAGCTAATGGAACAATGTA GAACCTTTATTTGGCAGCTAAGGATAGTTGGTAAATTCAGTCACACAATTATTAAGGTCCACTTCTGAATGGTTGTTAAGTGCTTATGCATTTTTCGTAA TGTAGTGTTGGAACTTTCTGAAAAATATCAGAAGCGGTATGGTCCACTGCGCTATTTTGTTGCTGGATTTCTGAAGTTCTTATGCTTACCGCAGTACAGC TATGAAGTTGAATATCTTCCAGCATCAAAAACTGAGAGAGGAGGAAATCTTTCAGTTGAAAGTGAAGTGGTTGACATGTCAGATCTTTATACCAACATCA TGAATAGATCAAATAAGGATGGGCTGCCCAGAGCATCTAGTCTTTCCAGTATCGACTCAATAATGACTCCAAGTCGTATGTCTGGTGGAGACCTGGATAC CTGCACTAGTACTCATGCTAGCACCGAACCTTCTGAATTGGTGCGTGGTTTAGATCCGAAGTCAAAACGCCTATCATCTGGAAGGGTCAATGTAACAGCA GAGCCAGAGGTCATCCATCCACAGCTGCCTCTGTCAACAACTCCAAACTGGCCAAGGACCAGATCTAAGTCAAGGAATGATAAAGGATGGAGTGGATTGA CCACCACACATGATACCTCTAGATGGGGCAATACTGCAGCAAATGATAGAGAGGATATCTCATCAACACTTTCTGATCCAGGTCCTATTTGGGATGCTGA ACCAAAGTGGGATGGTGAGGCTAATTGGGATGTGGAAAACCCAATTGAGTTGCCAGGTCCCCCAGATGATGCAGCAGTAGGATCCACAAAGGAAGTTGTG CCTCGTTTTGGAGACAAATGGATTGTTTCAAAGGGACACTTTGTTGGCATTCTGATTTGCAACCATGCATGCCGAACAGTTCAGAGCTCTCAGGTGGTCG CTCCCAAAGCTGAGTATGATGATAACACTCTAGATTTGATATTGGTTCATGGAAGTGGTAGGCTGAAGCTGTTGAGATTTTTCTTACTTCTGCAGATGGG TCGACATCTGTCACTTCCATATGTTGAATATGTCAAGGTAAAGTCTGTGAGGATCAAGCCTGGGAAGCATACTCACAATGGATGTGGTATTGACGGTGAG CTTTTCCCACTCACTGGACAAGTAATTTCTTCTTTGCTTCAAGAACAGTGCAGGCTTATTGGCCGTTCTAGTATATGATGATAACTGTGAGCGAGTTCTT TTGATTCTTTATGATGGATTCTGGGGAATCTCATGTACCTACCTTCTCCTCATATATATGAATTCAGACACCCAACTTGTCTTGTCAACTTGTTGCTTTT AACAGCTGAGCTTTGTAAATCCTTTGTTCCGGTTATATGTATCTCTTGTTGCTTGCTTATCTGTTTTGTTTATTTGTTTTGGAAAGAAGAAAAAAAACAT TGCACAACCAACTGATTTGGTATTGAGGGATGTAATTATGTGCTCTTGTTTATTCTGATATCCATCTATAATTTCAAGTTCACGTTGCTTGGAAGTTGAG ATGTTGGTGGTCTACAATGTCAAGTTTATACTAAAGCTAATCATCCTTAAAATCCTTGTAAGTGGATTGCAAGGTTTCGTTACAAAAATGCAAGACTAGA GAGAGCGGTTGTATATTGTGACTTGTCCTGTTGTGTTCCCAAAAATGAAGGCGCATAAATGAGAAATGGATGAAGCCCTTGTAACTTATTATCCATTGAG GATGAGTACTAGGCTGAGGGTCGTTTTAGGTCATTCTCCCACCCGAATTGTAGCATATGGTCATGGATATACCTCCTATGCCTTGTGAAGAACACCTCAC TAC
• Tissue: flowers
• Gene name: LI_gene_61363;
• Additional information: details;

Expression of Ll_transcript_153879

FPKM

• FPAB: 0.2
• FPNAB: 0.1
• LF1: 0.1
• LF2: 0
• LF3: 0
• LF4: 0.2
• UF1: 0.2
• UF2: 0
• UF3: 0
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_153879

• Blastp: Sphingoid long-chain bases kinase 1 from Arabidopsis with 71.7% of identity
• Blastx: Sphingoid long-chain bases kinase 1 from Arabidopsis with 70.34% of identity
• Eggnog: diacylglycerol kinase(COG1597)
• Kegg: Link to kegg annotations (AT5G23450)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452862.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;