| Id Trinity | FTRINITY_DN56598_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_156413 |
| Sequence | CACTTGGTCAATTACATAAAATATTCTAGATATTTCCGAGAAACAGAAAAAATGGAAACTTTGTGAATTTTAATACAAATAAAAACCCAATTATATTTTT GGGTTGGTTTTGCTACTATCATCATTCACTCACTGTATTTAATCCTCCTCCAAATGGAACAAAACCCTAATGGTTCTTGTATAAACCAGTAGCCGCCGGC TTGATCCTCTTATATATTGTTCATCTTTTTCTTACCTCACTGTTTTCTCTTTTCTTGGTCTTACTTCATAACCTTAATTTCACCTTTAGGAATTTCTTGT CTATAATCATGAAAACTTGACTCTGGACTCTAGAAAACTTGAATTAAATTTTGCAATCTTGTTTTCTGATTGATTCTCCGTGTAGTTTTTGTTTCAGCTT CTGAAATGTTTTTGCAGCACTTTTTCATAAAGTAAAGCTTGAATTTCTCTTGGTAGTTTTTTTCTTCAGTAACTGCAAGTCATAATTTTGTGAAGTTGCC AATATGGGGTGTGGTAATTTAGCTTCTGTGATGAGAAAGTTTGATTCTTTTAGTTGTTTCTGGGTTTAGGGTTTAATTTCAGGTTTTGGGTAATCAGCAG TTTTAGTTTTGAAGTTATATTTATGAAATAGATGATTAGAGTGTGATTATCAATTATCAATATTAAATTTAGATTCTGAAGAATGTTGTCTGAATTGGGA AGAAGACCGATGCTTGGGAACAAGGAGGGTTCTTTTGGTGATGATTTGGAGAAGGAGTTAGGGATGTTGCTTCGTGGGCAACGTAGACAGGAAAGTGATG ATTGGGAAAGAGAACTCAATATTTTCAGAAGTGGATCAGCGCCTCCAACTGTGGAAGGTTCTCTTAATGCAGTTGGAGGATTGTTTAGTGGTGGTGCTGA GGCTGAGGCTGATGCTGTTACTGCTTCCTTATCCGAGGAAGAGCTTCGGTCTGATCCAGCTTATCTTTCATACTACTATTCCAATGTGAATTTGAATCCT AGACTTCCACCTCCTTTGCTATCAAAAGAGGATTGGAGGTTTGCTCAAAGACTTAAAGGTGGAGGAGCTTCAGTTCTTGGTGGAATTGGAGATAGGAGGA AAGTGAACAGAACTGATGATAATATTGGTGGTAGATCGATGTTCTCGACTCCGCCGGGTTTTAACATGAGGAAACAAGAGAGTGAAGTGGATAATGAAAA AACAGGAGGCTCAGCTGAGTGGAGTGGCGATGGACTGATTGGATTGCCTGGCCTAGGGCTTAGGACCAAACTAAAGAGCACTGTTGAAAATTTTCAGGAT GACGTGGGGTGTAACACCTCTGTCACAGGCCTTCCTTCTCGTCCTGCCAGTCGTAACACATTTGATGAAAATGCTGATGCCATTAGTTTTGTCGAAGCAG AGTTAGGTCATATACACCGCGGTTCCCCAACCACTGATACTATTAAACCATCTGCAGCCCAAAATAATGGCCTATCAGCTTCATATTCCTATGCCGCTGC ATTAGGAGGATCTTCTTTGTCAAGAAGCACTACTCCTGATCCTCATATTGTTGCTAGGGCTCCCAGTCCTTGCCTCACACCAATTGGTGGTGGGAGAACT GTTGTTGCGGACAAGAGAGGCGTTGCCAGTCCAGATTTATTTAATGGTGTTTCATCTGGCATCAATGAGCCATCCAATCTCGTGGCTGCATTGTCGGGTA TGAATCTGTCAAGAGAAGATATACTAGATGGTCAAAACCATTTGCCATCACAGGTCGAATCAGATTTTGGTAATCATCAGAGATATCTTTTCAGTACGCA AGGCGGTCAGGATCATGGCAAGCAGCATGCATATTTTGAGAAGTCTGAGTCAGGTAACGTGCAAAATTCAAGCAAGACCGGTGGGAGTCGGCCTGACCTC AATAACCCATTTTCGGATAGGCATGTTGAGCAACAAAAATCTAATGTTCCTTCCCATAGTTCCTATTTCAAAGGATCACCTTCCAATTTTAATGGTGCAA GCAGTTTTTCTGCTCAGTACCAGCCTTCAGATGGAACAAATTCACCATTTACTAACTACGGCTTGAGTGGGTATGCTGGAAATCCAGCATTGGCATCCTG GATGACTAACCAACTTGGCACCGGTAATATGCCACCCCTCTATGAAAATGTTGTTGCAGCATCAGCTATGGCCAGCCCTGGAATGGACCCGAGAATTCTT GGAGGTGGTTTACCTTTGGGATCTGATGCGCAAAGTTATGGTAAAATGGGAAATCAAATTGCGGGCAGTGGTCTTCAGTCTCCTTTTGTTGATCCCATGT ATCTTCACTACTTGAGGACATCTCAGTACACAGGACAACTTGGTGCTCTTAATGACCTGTCCTCCGTGGACAGGAACTACTTAGGCAATGCATACATGTT TGAGCTTCAGAAAGCTCATCTCGGGTCTCTCCCCTCACCTCAGAAGTCACAATACAATGTTCCACTGGGTGGTAAATCAGGCGGCTCCAATCATTACGGG TATTATGGGAATCCGGCATATGGTGTTGGGTTGTCTTACCCAGGAAGTCCAATGGCAAACTCTGCTGTATCTACTTCTCCAGGTGGATCTGGAAAGAGGA ATTTAGCTGGGGTAATGGGACCTTGGCATGTAGATGCTGGAACCATGGATGAAAGCTTTGCTTCTTCTCTGTTGGGGCAGTTCAAAAACAATAAAACCAA GTATTTTGATCTCTCTGAAATTGCTGGTCATGTTGTTGAATTCAGTGCAGATCAATATGGAAGCCGATTTATTCAACAAAAGCTTGAAACAGCAACTACA GAAGAAAAAAACATGGTTTATCAGGAGATCATGCCATGTGCTCTTCCTTTGATGACTGATGTGTTTGGTAATTACGTGGTTCAAAAGTTTTTTGAGCATG GACTTCCATCCCAGAGAAGAGAATTAGCCAAAGAGCTTGTAGGCCATGTTCTGAATCTTAGCCTTCAAATGTATGGTTGCCGGGTGATCCAGAAGGCCAT CGAAGTTGTTGATTTGGATCAGAAGATAGAGATGGTTCAAGAGCTTGAAGGTAATATCATCCGCTGTGTCCGTGATCAGAATGGTAACCATGTCATTCAG AAGTGTATTGAATGCGTCCCTGAAGAAGCAATCCAGTTTATTGTCTCAACTTTTTTTGATCAAGTTGTGACACTTTCAACCCATCCATATGGTTGCCGGG TGATACAGAGAGTACTGGAACACTGCAATGACCCTACAACACAGCAGAAAGTTATGGATGAGGTTTTAGGAGCTGTTAGCATGTTAGCTCAGGATCAGTA TGGCAACTACGTTGTTCAGCATGTACTCGAACACGGGAAACCTCATGAGCGTTCGGCTATAATAAAGGAATTAGCAGGCAATATAGTTCAAATGAGTCAA CAGAAGTTTGCCTCTAATGTTGTAGAGAAATGTTTGAGCTTTGGAGGTCCTTCGGAACGACTACTACTAGTGAATGAGATGCTTGGATCCACAGAAGAAA ATGAACCTCTTCAGGCCATGATGAAAGACCAATTTGCAAATTATGTAGTACAAAAGATGCTGGAAACATGTGAGGACCAACAACGTGATCTTATACTCTC ACGGATTAAGGTTCATCTGAATGCATTGAAAAAGTACACTTATGGTAAACATATTTTCACACGTGTAGAGAAACTTGTTGCTGCAGGAGGTACTGTCACC TTTCACTTGTTCTATTATTTCTGCACCCTTGTATATATATATATACACATGAAAATTGTTATGTGCATTTAACTACAAATTATTTGAATTATCATATGTG AAGATATTACATGTAGTTTTAGAACTAATCATGTAATATGTTGCAGAAAGGAGAGTTGCTGCACAATCTTCTCAACCTGTTTAAGTGGCATAGAAAAATA ATGTTTGTACAGCTAAATGATGCTCCTAGTTTGAGTTTATTCCTTTCTCTACATCAAGAGGTTATGTTCATCTATCTATCAATGGTTGCTGATTGGAAAT AAAGTTGTGTGGGTGTAAAGGTTATGAAAATGGTGAGCTAGTTTATATGTTGGACATGACTGTACAAAAATGTTGCCATGTGGAGAGAACTGTCCTTGTT TATTTAGGTGAAATGGCAGGTTTTTCCTCCTATCTTGTATGATTATTGAGCTTTTTCCTTTCAAGAATTCAAGTTTTGTTAGCTTTACTTTTCTTGTGGT AGTGGAATTTGGATCCTGTGACGACAAGTTTGTGATTTCATGACTTAAAGTTTGTAATTGTATTTGTATTCAGTTAGTGGATAAAACATAAAATGAAGAT AAAAAAAGTAGCTCAATGCATGAGATCATAACATGTTTTCATGCAGTAACACAAGGCCAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_61505; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_156413
| Blastp | Pumilio homolog 2 from Arabidopsis with 58.77% of identity |
|---|---|
| Blastx | Pumilio homolog 2 from Arabidopsis with 58% of identity |
| Eggnog | pumilio homolog(COG5099) |
| Kegg | Link to kegg annotations (AT2G29190) |
| CantataDB | Link to cantataDB annotations (CNT0000352) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413173.1) |
| Pfam | Nucleic acid binding protein NABP (PF07990.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |