Ll_transcript_85425

• Id Trinity: FTRINITY_DN56600_c2_g4_i1
• Name Transcript: Ll_transcript_85425
• Sequence: CAATCCATGATTTAGTTTACCAACGGATGTTGGTTCAAGTGGTACATGTTTGATTCCTCTTAAGCAAAATCTCGGGTTCGAGTTTTGTGGATGAAAAAAA TGTCTGCCGAGAGAGTTAGTCTCACATACCTCTGGATGTTTCTGACTCGGACATGATTGCTTTCGGTGGAGTATACTTGTGGGAAACAAAAAAAAAATCT ATGATTTAGTTTTGTGGCCTAATTGATTTGTGTGTTTTAATTAATACTTTATGCAATTTGGGCAGTTTGGTAGAACAAGTAGTGTGCATTGAACATATAT TTAGGAGAGATGAGGTTGTTGTGTTGGGTGAATGAACACACTAGACATGATAAGATCATATATTTAGGAGAGATGAGATTGTTGTGTTGGATGACCGGAC ACACTAGAGAACACAAGAGTAGGAAATAATTTATGAGCGAAAAAGCTGGGGTATTATATAAAAAGATGGTATAATCTCGTCTTAGATGATTTTATAGAAG CCCAAGCGAGTAGCGTAAATCAGATGGAGGGTAGCTTGATAGATAGAGGTAGAAGGAGGCCAAAAAAAACCAATAAGAAGGGTTTAAATTTAAATGGTTT GCTTATAAACATGATTTACAATAGGATGTTGTGGCCTTGTTTGATAAATAGATTTGTGAGATAAGACTTGTTTTTTGGGATAAATAGATGGAAAAGGCCT GGTTGTTTTTCTCTTGCTGGTTTCTTGGGTCCTACAAAGGCTTGGCCAATCTTGTAATTATGGTAATAATGGTCAATCTCCTCTTTCGCTTTGTCAATGG ATATATTTATGATATAGCATTATGATGTCATTTGATCCATGTAACCGACTCCGCCTAGTTTGAATAAGGCTTGATTTGTTGTTGACTTGTTGGTTGTTGT TATTCACTCATTGTCATTCTCCCCTCTCCTGAAACATAAATAAATGAACAACTTGCTGCAAGCTTGTTGTCATCTAAGCAGTAGTACTAAACATGCCCCG TTTTCACTCATTTGCCTTAACACTGGAAATAGCATATTTCAACATCTTTTACCTGTAATTCTGATTAATGATTATGTTTGTAAAGTTAAACAAAGGCCAA CCAAGACAGATAAAGCTCCTTAAAGTGATCTTGTGCGTATAGTGAATAAGGGTGTATGCATCACCTTCAGATCATTTAGTGGGTTGAAACCTCACTGCAC CTTAACTAACCAAGGGTAGATAGACCCTTACTTGCTTACCCTATAGACAAACTCACTGTAGAGGAGCCTTTCCAATAATACAATGCTATGACATGAACAT TCATTGCATCGATACTAGTACATCAGTTTTAGCCTAGTGTCAGGTTAGGTGGTTGTCTATACTCTTTGCAAGTTCTCTAAAATGGGCTCTACTTTTGTTC TGTATGTATTCTTATGGAAACCCGTTGCTACTTAATGTATATTATTCTTCAGACTGGAACTGAAATCATACCATTTCTTACATGTGTGATTTTTAAATGT TGCGAGCACAATTGTGGAAATATAATTTGAATTACATTTTAACTGGAAGTTGATATTACTCTGCTCATGATTTGGCAAGTTGTTGGTTATTCCACAGATC GAAGCAAATCATACTCCAGTCTCTTCATAAGAATTTAGTTTCCCATTAAGGTATGAAGATGCTTGGAAGGTGTATGAGTTAATGGAAGCAGATAATATTC AACCAGATGACGTGACATGCTTGGTTATGATTATCGTTATGCGAAAACTTGGTCGCAGTGCCAAGGATGCATGGCATTTTTTTGAGAAAATGAACAGAAA AGGAGTCAAATGGAGCGAAGAAGTCATAGGTGCATTATTGAAGTCATTTTGTGTCGAGGGACTGATGAGTGAAGCTCTCATCATACAATCTGAAATGGAA AGGAAAGGAGTCTCTTCAACTGCAATTATGTACAACACTCTGATAGATGCATATTGTAAATCCAACTGTCTAGAAGAAGCTGAAGGCCTTTTTGCCGAGA TGAAAGCTAAAGGGATTAAGCCTACCGAAGCTACTTTCAACATTCTAATGCATGCATACAGCAGAAGAATGCAGCCTAAGATTGTGGAGAAGCTTCTGGA AGAAATGGAAGATGCTGGCTTGAAGCCAACTGCTAGGTCATATACTAGCCTAATCAGTGCATATGGGAAGCTGAAAAATATGAGTGACATGGCTGCAGAT GCATTCTTGAAGATGAAGAAAGCTGGTATAAAACCCACTCCACATTCATATACATCTCTGATCCATGCTTATTCAGTTAGTGGCTGGCATGAGAAAGCTT ATGCAGCATTTGAAAACATGCAGAAGGAAGGCATCGAGCCATCCATAGAAACCTACACTGCTTTACTTGATGCATTTAGGCGTGCCGGTGACACCGAGAC ATTGATGAAAATATGGAAGTCAATGGTTAGCGAGAAAATTGAGGGAACACAGGTTACATTTAACACTCTTGTTGATGGCTTTGCTAAACAAGGTCACTAC ATAGCAGCAAGAGACGTGATAAATGAATTTGGGAAGGTTGGATTGCAACCAACGGTAATGACATATAATATGCTGATGAACGCGTACGCACGAGGAGGGC AACACTTAAAATTGCCGCAGTTGCTGAAAGAGATGGATGCTCATAAACTGAAACCAGATTCTATAACTTATACAACTATGATATATGCCTTCGTCCGTGT TCGAGATTTTAATCGCGCATTTTTTTATCACAAGAAGATGGTCAAGAGTGGGCAGTTGCCAGATGTCAATTCTTACAAGAAACTTCGGGCGATCCTGGAT GATAAAGCTGTAATAAAAAACAAGAAGGATAAGAGTGCCATGCTTGGTATAGTTAATAGAAAGATGGGAATTATGAAACCTAAGGGAAAGAAAGATGAGT TCTGGAAATACAGGAAACGACATGTCAGAGAAACATAGTTCTGATGTTTGTATATAGTAAGTGCAAAGATGCGATCCAATGCCCTGTAAGAATTGTAAGC TCGATTTGACCCTCTTTTTTGGTGCTCTTAAGCTTTAATGAATGGCATTAGGCGATTCTTGCTTTAATTTAAACAATATGTCATCGTACATTGTCTCTTA AATCCAACATGTCACTCATCTTCAGGTATAATTTCCCAGTTTAAAATGTTAAATATTTGTATGCTGACATTTGCATTGTTCAACACTTAGAAAACAATGA TAAATAATTCAAATTAATGAAGTGATAGATTGGTGTTCATGTTTTAGATTATGACTATGGTTCTCATAGGAGCTGTGGTTCATATATCGGTGGAGCTATT AGCATTCAATGAACATGATTTATGATAGAA
• Tissue: flowers
• Gene name: LI_gene_61525;
• Additional information: details;

Expression of Ll_transcript_85425

FPKM

• FPAB: 0.1
• FPNAB: 0.2
• LF1: 0.5
• LF2: 0.4
• LF3: 0.5
• LF4: 0.2
• UF1: 0.5
• UF2: 0.7
• UF3: 0.2
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_85425

• Blastp: Pentatricopeptide repeat-containing protein At5g50280, chloroplastic from Arabidopsis with 70.94% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g50280, chloroplastic from Arabidopsis with 70.99% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G50280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461106.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;