| Id Trinity | FTRINITY_DN56604_c1_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_83565 |
| Sequence | CTCACTCTTGCAAAGATCCGAGAAGCTAAAGGAGGCTACCCTATGACAATTCAAAATACAATGTATGGTTCAAAACTCTTTATAAATGACAACAACATTG AAGAAATGAGGCACATACACTTTTACGGTCAATGAGGCTCTTTCAACAATTTTTGGTTGATGGTTATTGTATGATGGAGGCAGACAAACTTAATTGGGTG AGGAACAATCAAACACAACTTAGGGTTGACAGGTATTGTAATTTGAATTCCAACTCCGAGCCAAGGAGCTAACAAAGGAAAAAGAATCATATTACCATCA TCATTTGTCGGTGGTCAGCGATATATGGATCAATTATACTTTGATGGAATGACAATTTCTAGCTCTCTTGGATTTCCTGACCTATTTATAACTCTTACAA GCAATCCAAATTGGCCATAAATTAATAGACTTCTATCACCAATGCAATTAAAACCGCAAGATCGGCCAGATATCATTTCAAGGGTATTCAAAATAAAATT TGATCAATTTCTAAACGATTTGAAGAAGCATCATATTCTTGGTCAAGTTGTTGGATATATATACACAATAGAGTTTCAAAAAAGGGGACTACCTCATGCT CATATACTTTTGTTCTTACATCCATCTTCCAAGTACCCATCGCCAGAAGACATAGACAATATAATTACAGCCGCAATACCAAATACTATGGAAGAGCCTG AACTATATGAATTGGTTAAATCTCATATGGTTCATGGTCCTTGTGGAAGTGCAAACAGTAAATCACCTTGTATGAACAATGGAAAGTGCACGAAGTACTA TCCTAAAAAATTCCAGAGCAATACAATTGTTGACGAAGATGGATATCCTATTTATAGGAGAAGAGATAATGGACAAAACATTGACAAGAATTATGTTACG CTTGACAATCGCAAATTGCTTTTGAAACATCAAGCTCATATCAACATGGAATGGTGTAATCAGCGCAGTTCAATCAAGTACCTTTTCAAATATATTAACA AAGGTTATGATCGAGTAACCGCTACTATTATTTCCACGGAAAATGATACACCTTCTCAAATGCAAATTATAGATGAAATCAAACAATATCTTGATTGTAG ATATATGTCACCTTGTGAGGCATGTTGGAGAATTTTCTCTTTTCCGATTCATGGTAGATCACCGGCAGTTGAGAGACTATATTTCCATCTTGAAAATGAA CAGTTTGTTATATTTGACGATTATGAGGTTATTGATGATATTCTTTCTAAGCCTACAGTTAAATACTCAATGTTCACATCCTGGATGGAAGCAAACAAAA ATTATGTTGGAGCAAGAGATTTGACATATGCTGAATTTGTTTCAAAGTTTGTATACATCAGTGGTAATAGATGTTGGAAACCAAGGAAGCAAAGGAACAC AATTGGCAGACTCATTTGGGTTCCTCCAAGCACTGGAGAGTTATTCTATTTAAGAATGATGTTAACTTCCATTAAGGGACCATGTAATTATGAGCATATT AGGAATGTCAACAATGTCATTTATCCAACTTTTAGAGAAGCATGTTTTCCTATGAGCTTTCTTGAGGATGATAGGGAATATATTGAAGCTATAAAAGAAG CAAATGAGTGGGGATCAGGTTACTATTTAAGAAAATTGTTTGTTACAATGCTTACTTCAAATAGCATCAATCGTCCAAAACATGTATGGCAACAAACATG GAAACTCTTAGCTGATGGTATTCTTTATGAGCAAAGAAGGTTGTCCAACATGCAAAATTTGCAGCTCACTAACCAACAATTGTAAAATCTCACTTTGGTA GAGATTGAGAATCTATTACAAAGAAATAGAAAAAGTCTTAGGGACTATCCATCAATGCCATATCCGGAAGGAAGAATTACAAGTCAATTAGGAAATAGAC TTATATATGTTGAGCGTGATTATGATAAAGAAGAATTGAAAGCTGAATTTAGACATTGTTTTAACTTACTTACAGACGAGCAAAGGATCATTTTGATAAG ATCATGAAAGCTGTAAATGATGGAAGTGGTGGCACCTTCTTTCTTTATGGTTATGGCAGTACTGGTAAAACTTTCATTTGGAAAACTTTAGCTTCAACAT TGCGTTCAGAAAACCACATAGTTCTCACAGTAGCATCAAGTGGAATAGCAGCATTGTTATTGCCAGGAGGAAGGACAGCTCACTCCAAGCTAGCCATACC AGTTCCTACCCTTGAAAACTCTACATGCAACATCCATCAAGGGAGTGAACTTGCAGAGTTATTAAAACAAACAAAGTTGATTATATGAGATGAAGCTCGT ATGACACACAAATATTGTTTTGAAGTGTTGGATAAAACCCTCACAAATATAATGAGTTTCAAGGAAAAAGGAAATACAACATTTGGTGGAAAAGTCATTG TTTTTGGTGGTGACTTTAGGCAAATTCTTCCAGTAATTCCAAGAGGTAGTCGCTCAAACATTATCAATGCTGCAATAAATTCCTCATATATTTGGGACAA CTGTCAGGTATTAACTTTAACAAAGAATATGCGTCTTCAAAATAGTACAAACAAGACAAATCAGTTACAAGTTCAACAATTTGCAAAATGGATTTTAGAC GTGGGTGATGGAAAACTGTGAGAGCCAAATGATGGATATGCATTGATTGAGATACTTGAACAATTTCTGATAACTAATTATGATGATCCCATTGATGCTA TAGTCAAAAGTACTTATCCAAATTTAGTTCATGAATACATGAATGAGGAATTTCTACAATGTAGAGCTATTTTGGCGTCAACAATTGAAACAGTTGATGA AATAAATGATTGTGTCATATCATTAATCCCAGGTGATCAAATGGAGTATTTAAGCTCAGATTCTATTGATAGGTCAGAGTGTAATGACAATGAAGCTCTC AAATGACTTACTCCCGAGTGTCTAAACTCCCTCAGAACTTCCGGATTGCCAAACCATAAAATCAAATTGAAGGTAGGAACACCAATTATGCTATTGAGAA ATATAGATCATAATGATGGCTTGTGCAATGGAACAAAAATGATTGTAAATAGACTAGCAACCCATGTCATCGAAGCAAGGGTAATGACAGGAAAAAATAT TAGGAAGATCTTCTACATTCCACGAATGAGTTTGTCTCCATCCCATTCACCATGGCCTTTCAAACTAACAAGGAGACAATTTCCATTGATGGTTTCATAT GCTATGACAATAAATAAGTCACAAGGTCAATCGCTAGCAAGTGTGGGATTGTATCTACCTAAACTAGTTTTCAGCCATGGTCAACTGTATGTCGCTTTTT CAAGGGTTCAATCAATGGAGGGACTTAAAGTATTAATACATGACAAAGAAGGAAAATCAATCAACACTACGATAAATGTGGTGTTCAAAGAGGTTTTCCA AAACTTATAAACAAAGACAGCTCTAACACTTCCTACCAAATGTCAATCTTATTCAGCTCTTATAAACAAAGACAGCTCTAACACTTCCTACCAAATGTCA ATCTTATTCAGCTCTTATAAACAAAGACAGCTCTAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_61566; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_83565
| Blastp | - |
|---|---|
| Blastx | ATP-dependent DNA helicase PIF1 from Xenopus with 27.09% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451814.1) |
| Pfam | Helitron helicase-like domain at N-terminus (PF14214.5) |
| Rfam | - |
| GO | - |