| Id Trinity | FTRINITY_DN56608_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_85354 |
| Sequence | CAAACCAGTCACACACATCAATAATAATAAAAGACACATTTTTTATTACTATTTAACAATTCATCTTCAAATCTCATGTTTTTCATTCTTCTCTTTCACT AACAGATCTCAAATCAAATGGCTGCTTTCTCATCCCTTCTCAGGCGCCTCTACCTCACCGCTTACAATTGGATTGTTTTCGTTGGATGGGTTCAGGTTCT GTATCATGTTTTGAACACTTTGAAGGAATCGGGTCATGAAAATGTTTACAATGCAGCCCAAAAGCCATTGCTTTTTGCTCAAACCGCTGCTGTGTTAGAG ATTCTTCATGGTTTGGTGGGATTGGTGAGGTCTCCTGTATCAGCAACCTTGCCACAGATAGGTTCAAGGTTGTACCTGACTTGGGGCATTCTATGGAGTT TCCCTGAGGTTAAGACAAAATTGGTTTTTTTGAAACAATATTTTGCTTATCATTTAAATTACTAATTAATCTTTTATTGACAAGTTACCATGTATCTGTG ATCGACAGACTCAGTCTCATGTGCTCGTTAGCTCCCTATTAATCAGTTGGTCTATCACTGAGGCAAGTCCTTCACAATTACTTGTTTGGTTTGTTGTCAT ATTTGTACTTAAACATGCCTCTCTCTTTTTCGTTTCATTTTTGTTCATATTTTGAAAATTCGACTATCATCCATGGTTGAAAACGAACGTGCATAAACTA GTGAATTTATTAATGATGAGTATAGTATGTTTGGTGGATTGGTGGGCCCCATGGCTTTGAAGAAGATAAGTCATTCTAGGGACAAAGCGAATCCTCTTTA AAAGAGGTGGCCGTTAAATTCGAGGATAGTATAGGGTTTAATAAATGGTGGAAAAGATTTAATCTTAAGTTTAAGTTATCTGGCACATCCTATCGTTACA TCTGTATCTCTCTCTTGTTAATGAGAACTTAGGATTCAAATAATAAAAATTCCAAAAGTCTGATTCTTGTGCCTAACATATAAAGGCAGTCCTGAGATGT CATTGATGCGAAACAAAAATAGTGGAAGATTAGACTTTATGATCACATTGATTAGATACTAAGTGAGTAACCATCGATGATGTCTGTTTTACATAAAATG TTAAAAGTTTTTTATTTAATGGCTATGAGAACCTATAGTTAGTTTGCAATTTAAATTAGCGAGTCGGGTGACTGAAAATCTGCCACGCAAACCTTTATGC TTGGTGTCACATCTTCCCCTGCTATTCCTTATTTTGCTTATGCTACTATCCGTATCCCTTTGTTTTCTGTGTATAAAATATGTTTGAAAAGGGAAGAGAA TTATTAAAAAAGATCAATCTTTGCTGTTGCAATTGCAGATAATTCGCTATTCTTTCTTTGGATTTAAAGAGGCTTTTGGATTTGCCCCTTCGTGGCTCTT GTGGCTCAGGTATGTAGTTTGAATATTGAGCCTGTAGTATGGACTGTGCAGTACACTATTAGGCAAATCTTACCTTGCTGTTATATTGACTACAATATTG TCCATGCAGATATAGCACTTTCTTATTGCTTTATCCAACAGGCATTAGCAGTGAAGTTGGTCTAATATACATCGCCTTGCCATTCATCAAGGCGTCTGAG AATTATTGCGTGCGGATGCCCAACACATGGAACTTCTCATTCGATTACTTCTATGCCGCTATTGTTGTATTGGGAATCTACGTTCCAGGTAGCCCTCACA TGTATCGGTACATGCTTGCACAGAGAAAGAAAGCTCTCTCGAAATCAAAGAGAGAGTAGAGTAGTCTGTACTTTTTGCTTTCAGTTGTTCTTTTGGCCAA ACATAGGATATATACGCATGTAATGGTTTGGATTCACTTATGTGTAGTAGAAATTCTTAATTGCTAATGTATCCTTAGAAGAAAAATGCTGGAGAAAGAA AAAAAGAAATTAACTCCCAGTTTTTGTTCTTTGGTGGTTTTGTGCCCATTCCTCTAACTGAGGCTGTTGTTTTTGGACCAGGATCACCTGTCCCAACACC CTGTCCCAAACCCTATCTCTGCCCAATGAAATAATATAAAAATATTACT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_61588; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_85354
| Blastp | Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2 from Arabidopsis with 77% of identity |
|---|---|
| Blastx | Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2 from Arabidopsis with 74.76% of identity |
| Eggnog | Protein tyrosine phosphatase-like(COG5198) |
| Kegg | Link to kegg annotations (AT5G10480) |
| CantataDB | Link to cantataDB annotations (CNT0002686) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445392.1) |
| Pfam | Protein tyrosine phosphatase-like protein, PTPLA (PF04387.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |