Id Trinity | FTRINITY_DN56610_c0_g1_i20 |
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Name Transcript | Ll_transcript_83886 |
Sequence | AAAAAAAGCATGAGTCAATTCTTTACCAAATTATTATTATTATTTTCAAAAGCATAAAGGAGAACATATATGTCACCAATTTTTATTTGACTAAATTAAT TCAAACTAAAAAATATAGTGATAATTACTCAAACATCCTCACATGTGATGATAACGTGTTGTGTAAAATGATGGAAGAAGAGGGGTAAAATAGTCCGAAA CATAAAAGCAAGGTTCATTTTGTTTCGTGGTGCATAACACATGACAGAGAGGCAGGGCTCATAATACAACACAATCTCTCTCGTCTCTGCCAGGATTAAA CGCCGTCGTTTTAGAGCTCTTCGCTTCCATCTTTGATTTCGGAAGGGAGAAAATAATTAACGCATAAATATTATATTTTCAATTTTACTATATTCCAATT GGAACAAAAAGGAATCGGATCTCAGTTCTTAACAGGAAAAAAAGTACTCTTCAGAACAAAAAAAAGTTCAGTTTAGAGCCTTGCTTTTGATACTGTCAAG AATTCGGTGGATGGCAGAAAAATCATGCATCAAGCGCCTTCAGAAGGAGTATAGAGCTCTTTGTAAAGTAAAAGATCTTTTGTTTATTGAAAATTTTGCT TCACCATTTATTTTACTTTCAGTTTGTATGCTTATTCTGTTGAACTACTGTCAATCTGCATATGGCTATGCATGTTCTGTGATCTCATTGGTTTGCCTCT TCCTCTCTATTTTCTTGTCTATTATTACATGTTCTCGAATTGGTGCTAATTTGATGTAGTGGGCTTGTGGCTAATAAAGCATTTAGAGCATTAGACACGG AACACACTATCTACCTTATTTTTCATTTCTGCTGCTTTAATTTCTTAATTTTTTGGATCTGTATGGATAAATTGAAATGACATTCTTTTCAGAAGGAAAA TAACCGTCAACGATGGTATTTAACGAATATGTCAACAGGCATGGGGAAAATAAGGTTTTAACTTCTCTTTGGTGCTTGGCTAATGGTCTTTTATGGTGGA TGCCATTTCAGATTTACATAGAGATTTGACTGTCATTGTGCTTTTTAACATCGACCTCTGTTTCTTTGTTTCATTGTAATTTTTCCTTTCTTTTGTTCTG TTGTGGTAGATATCTTACTGACTCTTTGTATGCCTCTTTCTTAATCAATTTATTTCTCTATAAAAATAAAAAAGAAAATGTCAACCAGATATTGCTTAAT TTTAACATTGACCTTGCAGGAGCCTGTTTCCCATGTTGTAGCTCGTCCTTCACCAAATGATATTCTGGAGTGGCATTATGTGTTGGAGGGAAGTGAAGGA ACACCTTTTGCAGGTGGATATTACTATGGAAAAATAAAGTTTCCTCCTGAATATCCATATAAACCTCCTGGAATCAGCATGACTACACCTAATGGACGGT TCATGACTCAGAAAAAGATTTGTTTGTCAATGAGTGATTTTCATCCAGAAAGTTGGAATCCTATGTGGTCTGTATCAAGCATACTTACAGGTCTTCTTTC TTTCATGATGGACAACAGTCCAACCACCGGCAGTGTAAACACAACTACCGCCGAGAAGCAGCGGCTAGCAAAATCTTCCCTTTCTTTCAACTGTAAGAAT GCAACATTCAGGAAAATGTTCCCTGAGTATGTGGAGAAGTACAACCAGCAGCAGCTTTCTGAGCAAGTTGCTTCCGAAAAGGTATTGTCGGAAGCTTCTC GTGATAAAAGTTCAAGTCCTGTTGTAGAAAAGAATTTGAATTCTACAAGGGAAGACATGAAAAAAGTAGATGGTTTGAAAGAGGTGAGAAAAAAGAAGCA ACCATTTCCAACATGGATGATGCTATTACTCTTCTCAATCTTTGGGGTTGTAATGGCATTACCACTACTTCAGCTTTGATGATAGCCACTGAAATCTTAT TTGGTTCCATATATGGTTTTCCTGGAACTGGTTTTATATAATTCTGCTTAGGTTTTTGTCATGTCTAACAGGGATTTGTATAGAGAAAATGGACATGGAG GCTACTTTATATCATGTCTGAATTTTACTCCTTTGTGTCTATGTTATCAACTTTTTGTAGTCAATGATAAGAAGTTACATGCTTCATAGTTGTGGTGTTC CTGTATCTGTTTGAATTAAGGTTTGTGTTGTAGTATTGTTTGGTAAACACATTTAGCTATGGTTTTCGTTCTACATTTTAGAAGCATAGGTAAATGGAAT TAGATAATCATATATTATAGGTAAAAATTCATTGTATGCAAAATAACAAAAATATCATTCATCTGCATGTTAATCCTTTTGTGCGTCATGGATGTTTGTG ACTCATCAGAAGTGACACACTTTTGTGGACAATAGATCTTGCCGCCTATTTCCGATGCCACAATCGAAGACTCAATCCC BLAST |
Tissue | flowers |
Gene name | LI_gene_61600; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_83886
Blastp | Ubiquitin-conjugating enzyme E2 34 from Arabidopsis with 76.02% of identity |
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Blastx | Ubiquitin-conjugating enzyme E2 34 from Arabidopsis with 76.02% of identity |
Eggnog | Ubiquitin-conjugating enzyme E2(ENOG410Z0AN) |
Kegg | Link to kegg annotations (AT1G17280) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019430306.1) |
Pfam | Ubiquitin-conjugating enzyme (PF00179.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |