| Id Trinity | FTRINITY_DN56617_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_84598 |
| Sequence | CCTGAGGCAGAGGGGTTGATGATGATGATGATGGGCGGTGGTGGTGGTGGTGGTGGTGATTCAGCGCTTGTTCGCGTGGTTGCTCAGTCACTGAAGCCTG ACCTGAGTTTGGAAAATGGGTGGCCCCAGTTTGGAAAGTTTGACGTGGGATTAGTAGGGTCTTCTTTATTGCCACATGTTTCTGCTTTTGAGGATAATTC AGCTATTTCAAGGACTTGTAGCAGAGACATGGCTTCACCAATGGAGAAAAAAGAAACTTTCAAGAAGAGAAAAGGTGAAAAGGATCAAAATTCCAAGGTT GTAGAAGAAAAAGATAACAAAGACAAGAAGATCAAAGTAAGTTATGGTGAAGAGGAATCCAAAATGACAGAGCAAACCAGTAGGAAGAACACAAAACCAA ACACAAGTAAAAACAAGGAAAGTGTTGGCGGTGATAGTTCGAAGGAGAACTCAAAAGAGTCCGAGGCTGAAAATCCAAAGCCTGATTACATTCATGTCCG AGCGCGTCGCGGTCAAGCCACGGATAGTCATAGCTTGGCTGAAAGAGTTAGAAGAGAAAAAATTAGTGAGAGAATGAAGTATTTGCAAGATTTAGTACCA GGCTGCAGCAAAATTACCGGAAAGGCTGGAATGCTTGATGAAATCATTAACTATGTTCAGTCCCTACAACGACAAGTTGAGGTTAGTTTTGGATCACTCC ATTCCTTGCCTTTGACATTACTCTATAAGAAATTAGGCTAATTTGTTTTTATTGTCACATTGGACAAGTATTTAGGAATTACATAATTCTAGGTATACTT CATGTGTATACAATTTTCATCTTTTCATCACAAATGGGAAATGGCTCATTTTATTCTCTGCATATTTTGCCATTTACCTAAGATGCTATTAGATGTAGCT TTATCTTTAACTCCGGATAAATCTTGTCGCCGTTACCTGTTAGCACATCTCTCAAGCCTAGAGGCACATGGTAAAACTAAAATATATAAGCAGAGAACAA AATAGGGCCATTTACAACAAAATGGTGAAAGTTATTCAGTCATGAAGTAATGTGTGTAAATATGTGGATGGTATTATTCATAAATACTATATGGTTTGAA TATGAAGAGCGATTGAAATACGAGTGACTTACTCTATTAATTTATCACGGCATGCAGTTCTTGTCAATGAAATTAGCAGTTGTAAACCCAAGGCTAGACT TCAACATTGATGATTTGTTTGCCAAAGAGGTAAGAGAAATATAGATACCAGAACTTCTGTAGCTCAATCACATTCTATGACTATGAGCAAAATTACTTAG AACTCGCGTAAGCGTTTTTGTTTGACATACTCTTGAATCTGATACCCTCAGGTATTTCATGCTTGTTCTCCAAGTTTTCCAAACATAGAGATGCAATCAG ACATGACTATTAACCCTGCTTATCTTCAGTTCAATCCAGCACAGCTTGTTTCATATCGTGGTGGATTAATAAACAACCCTTCAGATATGGAGCTTAGAAG GACCACCACTGCACCGGTATATTTGCCTGAAACGTTTATCGATGCATCATCTTGTTTCACTCAAATTTTACCTTCATCAACTTGGGAAGGTGATTTCCAA AACCTTTACAATAATGTTGCTTTTGATCAAGCACGGACACCATCATTTCCTTCTCAACCACTTTCAGGTGTGGTTGACAATAGCAATATAAAGATGGAGA TGTAGAGAAGATCTTGTATTACCATTTATTATATGAGCTCATTCAAGATGCCTCTTATCAAGATTATTTTTTCTTTTCAAGTACATAGCATAAATTGGTT GTATATTACTCTATAGTATAAATAAGATCATTTAAGTACTTGTTAACTTCAGTCACCTTCTTCTGGACTTTATAGTACAACATAACCAAAGGGAGAAAAG TTGATATTGATGAGTAGATGTGACCATGTACCTATCTCAATGTACATAAGAGTGGTGATGGCAATCTTCCACTGCTTTCTTTGTTTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_61654; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_84598
| Blastp | Transcription factor HBI1 from Arabidopsis with 48.77% of identity |
|---|---|
| Blastx | Transcription factor bHLH63 from Arabidopsis with 66.07% of identity |
| Eggnog | basic helix-loop-helix (bHLH) family protein(ENOG411190E) |
| Kegg | Link to kegg annotations (AT2G18300) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451429.1) |
| Pfam | Helix-loop-helix DNA-binding domain (PF00010.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |