Id Trinity | FTRINITY_DN56617_c1_g2_i1 |
---|---|
Name Transcript | Ll_transcript_84583 |
Sequence | CAAAAGCCTCACAATTCCAAGGTCTGTGAATTTAAACAAGAACTATTAAAGCTATCATTTTACAATTGATGTCTCAAGATTTTGAGTTCAAATGTGGTGT CAAATTCATTCTTGTAATTGCTCACTTAACTGGTCAATAAACAAGATTAACTCATTCTCCCATTTTCAATACTTGCATAAGGTTCCATCATGAAATTCTA ATGTTAGGATGCATGATCCTTAAGATGCTGTTTGGTTTGTGTTGGATAAAATAGTTAATTTTAAGAATGAATGTTTTTTATTTATGTTTGTTTAGGGTGT AGCAGAAAGTGTTAACAAAGAGAAGAAGATCAAAGTGAGTGGTGATGAAGAGGAATCCAAGATGGCCGAGCAAACCAGTAAAAAGAATACAAAGGCAAAC ACAAGTAAGGCCAACAAGGAAACTTGTGGTGAAAGTTCCAAGGAGAATTCAAAAGACTCTGAGGTTCAAAATCCAAAGCCTGATTACATTCATGTCCGGG CACGTCGTGGCCAAGCCACCGATAGTCATAGCTTAGCTGAAAGAGTTAGAAGGGAAAAAATTAGTGGGAGAATGAAGTATTTGCAAGATTTAGTACCAGG TTGCAACAAAATCACAGGAAAAGCTGGAATGCTTGATGAAATCATTAACTATGTTCAGTCCCTTCAACGGCAAGTTGAGTTCTTGTCAATGAAATTAGCT GCTGTGAACCCAAGACTTGACTTGACCATCGATGATTTGTTTGTCAAAGAGGTATTCCCGGCTTGTTCTCCAAGATTTCCAAGCACAGGGATGCAATCAG ACATTACTACTAACCCTGCGTATCTTCAATTCAGTCCAGCACAACTTGTTTCATATTTTGGTGGATTAATAAACATGGGAATAAACCCTTCAGATGTGGC ACTTAGAAGGACCATCAGGGCACCTGTATCTTTACCTGAAACATTTATTGACTCATCGTCCTGTTTCACCCAAGTTTTACCTTCCTCAACTTGGGAAGGT GATTTCCAAAACCTTTACAATAATGTGAATCTTGATCAAGCACGAACAGCATCATTTCCTTCTCAAACATTTAGAGGTGTAGTTGACACTAGCAATCTAA AGATGCATATGTAGATGAGTTCTTCTATTACCATTTGTTTGATGAGCTCATTCCAGAAGCATCTTATCCAGATTCTTTCTTTTTAAGTACATAACATAAA TTGATGTATACTACTCCATAGTATAAGTAAGATCATTTTAGTAGCTGTTAACTTCAGTCACCTACTTTTGCACGTTTGAAGTAGAACATAACCAAAGGAG AAAAAGGTTGATAGTGATGAGCAGATATGTGAGCAGGTACCTAACCCAATGTACTTGAGAGTAGGGAATTGCAACCTTCCACTGCTTTCTTTATTTTAGT CTTTTTGTCCTCTCCAAGGACCCTCTTTCAGCTTTATGTTCAAATTTTGATTACTTTAAGTTGTTTTCCATTAGTAATGTCATTCTCATGTCGTTTTCAT TTCATTGTTAGGGTTTGGGGTTTTCAATGTTAGGTTTTGCTTTCCTATGGAATTTCTTAAGCTAGGGATGTTTCATAGGTTTAGAGTTTAAAATTGTATA TTTTGGATTTCTTACCATTCAACTTTTATTACTCTGAGAACACAAAGAATAACAAAACTCCTTCTGCCATATAATTACATATAATTACTAAGAGAATAAA GTATTTCCTTACACAGGGAGATAAATTATCTCCTTAAATCTATTCATTACTTG BLAST |
Tissue | flowers |
Gene name | LI_gene_61655; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_84583
Blastp | Transcription factor bHLH63 from Arabidopsis with 55.08% of identity |
---|---|
Blastx | Transcription factor bHLH63 from Arabidopsis with 48.28% of identity |
Eggnog | Transcription factor(ENOG410YGAM) |
Kegg | Link to kegg annotations (AT4G34530) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448496.1) |
Pfam | Helix-loop-helix DNA-binding domain (PF00010.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |